Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0026140 | OGI:02071470 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:25438386-25442619 | ||||||||
| Gene Symbol | GA2OX9, OsGA2ox9, GA2ox7, 2-ODD35, Os2-ODD35, 2ODD35, Os2ODD35 | ||||||||||
| DNA seq | cccttggaatgctcttctatagactatagtgcaaagctatgtataaaatgcaagtacatcaaatttcttacaaatccaaagaaatactagttattcatcaacatacatacagcacgtttaagaaacatcataattcaaaccaaaggacaagggatcgaaggccgtacataaactgtacatggatcccttatcttatttcctacgtacatatataccggcaatctcctaccagtacttgtacaccgtcaaactaagctacaataaactaattaattaattaattaatgtactgcactcttagtcattaataattgtacatttactgatgatacacagaacggaactgaaactggccggccactgaatttgtgtgcgcctcatacgaggaaattactgaggccagtcttcttccccgtcttcttgacgtcttcctgcacccttcgcctgtactccccgaaggtgaacgccttgtaaggggaaggctccctgcacgtgccgatgggcgagtcgtacgacgggcagaggaagtaggcgacggagtatctctccgtcgtcgcgttcgtcatcaccctgtgctccacgctcttgtacctgttgttgctccacgccttcaaaatagaagtagagtcggaaaaacgtcaggaattgaattgaaccgccctaatttggttcaacgtggtagagtataagtttagtacggcctcgcatacactgtccactgatgcttaatttaatgattcacatttgtatgtttcatgtattttttttaaaaaaataagtttacaatggttaatacttagtaattaatcatgctttaatcatccactacattttcgtgctgtaataagcttaagcttatcacattcaaatggcgcctaaactgttataatttggtcctcccaagatgtaagtataaatgtactattttctgactaacgtagatattttcttagaacgtgttgttgggcataggcatagattgagagatttcttttagactctagttatagcacgatatagtagtacaatagtagtagtactatgttatcgtgaccgatcaagttccctagcaaaagtcgcaaatgtaccatgtgagtgtaactgacaagtcgatctttccattctactagcccttttgcacgatgtttttctgtcccttgatcatagcggaatccgcagccttttttttttcgctagcggcggtacagcgatacacgcaggcaaggctgctgatagataggcacgacatgcccacaagcacaagtacgcaaagcgtgacgctgcaacgtccgccttttggagagccggaggcccggaatatgttcacggaatctgtactttttcacgcagacagacaaaccacctaccataggcagatgcaggctttgactccacaggttggaaagcattgccggccgcagccagccagccagccagccggccggccagccacgagagcctgtattgtactcgccttgtccaaaacaattatgcacatttttttctcctctcccgtgcaaagcttcgtagaatatggagtagttgttgattgggtatatagcactatatatagcacgtgtggtatgcatgattaggtgtaacagcaagttttatagtagggatgattgtcacccttaatattatccacatcatcaactaattaattattaggaggtaaaatatactacacattatctctaatatactagctccaatacaagaaaactatttgtttcatgcacttttcatccaatcagcgccatatttttctctttatgagggggtgactcatcctctttttctcttttgttttctctcttccatcttagtaccattatgcatatatggtatttagggatttgtgttgagatgtttatacaacgttggagttaatgggtgtacctgaaaaaggtctccgatgttgacgatgagggcgccggggatgggcttgacggcgacccagcgggagcccttcatgagctgcaggccgccgacgtggtcctggcagagcacggtgaggaagtcgctgtcggtgtgcgggaccaggccgaaggcgtcgtccggtgggaaggggcacggcgggtagcggttcagccggaggaagcacgtcgcgtcgtcgcacccctccgggaatcgctcgccggcggcgtggcccaggaggctctccgccagcacgcgcgccagcgccctggccagcctcgacatcgcgtccgccacctcccgcgtcacgtccctgcgccgcccccacacggcaactagatggtgttagttgcgaaatcagtgtactgtgttgttttgccgacctgaaaccctctctattctaatatatgttaggtcctggaatatttcttttgttggatcaaggtaaacataaaaaaaggtggattaacggtggtaacaaatggttttatatttcatatgtacacatgtttcccctccgtactgtacaaattgtttacccataactaaagagctcctgaaaagcggaccgtatttttgtgttgttgacttttgataacttcctacaactaaagtaccagtttaattagagtgtaccacgtgtttcaatttgtaaggattaaatcatagtgatcataaataatcaaatgttacatataggtgagtatgtttttaatacaaaactaatgttttttaatctttaaacgtacgataaagagataaactcgtcgactcatgggtgggtaagtgcgttgtatatatatggatacggtgctagtggtgcgtgcacgcatatttttacgtaattgaagaaaaataaagtgtaactcatgctgtctcttaaaaaggtaagtgttcatggtacttggatgaccattttgcatcccgctttttaaaaaagagaaaaaaactaagcagaagcacagctttattatctttttttacatcattagatgcgaattagagagaaccccagcagctctcgaactacgtacttcatgatcaagacacatcattcgaaagagtgattttgctaggcgagcttattattaaccacaccgtaattaaagtgatatttccttttcacccggttcttattccgccgcactaattaatccaccatgtcgcaatcatataacccgatgtacgtcccgatcgatcgaataaattcatttagttacgcgagaccaaagaacacttttcatcattattcttctgtactttgcaaataccggtcagcttaattagcgctatagatagaacatggaagaatctgaatcatgcgtgcactacacatgtcgaagtgtcgactgactgactgactgactgacgagcgagctaactagcacgtgtaattcctccgtcctataaaaaaataaaattttaattttagatatatactctcttcgtccatgtaaatttttaattttagatatatactctcttcgtcgatgtaaagaaagtcgtttaaaataatgtttaagtcaaaccttgagaatataaattatgaataactaaagttgttgagtttgaaaatgtaaaattatatgaatagatttgtcttaaaaaaaatactttaattaaaatatacagacatcacttttcaataaataacttttatagaaataagaaatcaaaattgtgttttagagaccgtgtcgcttgtttaaaacgactttctttacgagtacggagggagtagctataagtttattttttatagcatgatggtgtatacacgtggagtatgtacgtacctgagggaggtgaggtcgccgtagttgcaggatttgccggagatgccggcgagcgggaggtggaaggcctccgaccaggagagctggcggagcgaggtggcggtcggggtgccccagcggtaggagtcgttgaggaagccggcgctggacttggcctcgaacgggaggcggaacagccgcgcctgctcccggcgcatcgcctccaggagctcctgcgcgacgccgtggttcaccacctggaagaacccccactccgcggccgccgccgcgatggccgccgcgcaggccgccctctcctcggcttgatgctgctgccccacggcggcggcggcggcggcgccggtcggcgccgtcaggcaaccgacgtcgatcatcgggagctcgcactccgacacgggctgcggcgtcgtggtcaccttcgtgcacgcgtcgtcgtcgtcgtccccgccgaggcggagcagcgcgtagtagctgtccgccagcggcgggtcggccgcgcaatccgcgatggccggcat
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| CDS seq | atgccggccatcgcggattgcgcggccgacccgccgctggcggacagctactacgcgctgctccgcctcggcggggacgacgacgacgacgcgtgcacgaaggtgaccacgacgccgcagcccgtgtcggagtgcgagctcccgatgatcgacgtcggttgcctgacggcgccgaccggcgccgccgccgccgccgccgtggggcagcagcatcaagccgaggagagggcggcctgcgcggcggccatcgcggcggcggccgcggagtgggggttcttccaggtggtgaaccacggcgtcgcgcaggagctcctggaggcgatgcgccgggagcaggcgcggctgttccgcctcccgttcgaggccaagtccagcgccggcttcctcaacgactcctaccgctggggcaccccgaccgccacctcgctccgccagctctcctgggacgtgacgcgggaggtggcggacgcgatgtcgaggctggccagggcgctggcgcgcgtgctggcggagagcctcctgggccacgccgccggcgagcgattcccggaggggtgcgacgacgcgacgtgcttcctccggctgaaccgctacccgccgtgccccttcccaccggacgacgccttcggcctggtcccgcacaccgacagcgacttcctcaccgtgctctgccaggaccacgtcggcggcctgcagctcatgaagggctcccgctgggtcgccgcgtggagcaacaacaggtacaagagcgtggagcacagggtgatgacgaacgcgacgacggagagatactccgtcgcctacttcctctgcccgtcgtacgactcgcccatcggcacgtgcagggagccttccccttacaaggcgttcaccttcggggagtacaggcgaagggtgcaggaagacgtcaagaagacggggaagaagactggcctcagtaatttcctcgtatga
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| Protein seq | MPAIADCAADPPLADSYYALLRLGGDDDDDACTKVTTTPQPVSECELPMIDVGCLTAPTGAAAAAAVGQQHQAEERAACAAAIAAAAAEWGFFQVVNHGVAQELLEAMRREQARLFRLPFEAKSSAGFLNDSYRWGTPTATSLRQLSWDVTREVADAMSRLARALARVLAESLLGHAAGERFPEGCDDATCFLRLNRYPPCPFPPDDAFGLVPHTDSDFLTVLCQDHVGGLQLMKGSRWVAAWSNNRYKSVEHRVMTNATTERYSVAYFLCPSYDSPIGTCREPSPYKAFTFGEYRRRVQEDVKKTGKKTGLSNFLV |
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| Function | Gibberellin 2-beta-dioxygenase 6 [UniProtKB/Swiss-Prot:Q7XP65] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0026140 | OsKeNa_02g0026140.01 | Chr02 | 25438386 | 25442619 | - | NAM | ||
| CDS seq | atgccggccatcgcggattgcgcggccgacccgccgctggcggacagctactacgcgctgctccgcctcggcggggacgacgacgacgacgcgtgcacgaaggtgaccacgacgccgcagcccgtgtcggagtgcgagctcccgatgatcgacgtcggttgcctgacggcgccgaccggcgccgccgccgccgccgccgtggggcagcagcatcaagccgaggagagggcggcctgcgcggcggccatcgcggcggcggccgcggagtgggggttcttccaggtggtgaaccacggcgtcgcgcaggagctcctggaggcgatgcgccgggagcaggcgcggctgttccgcctcccgttcgaggccaagtccagcgccggcttcctcaacgactcctaccgctggggcaccccgaccgccacctcgctccgccagctctcctgggacgtgacgcgggaggtggcggacgcgatgtcgaggctggccagggcgctggcgcgcgtgctggcggagagcctcctgggccacgccgccggcgagcgattcccggaggggtgcgacgacgcgacgtgcttcctccggctgaaccgctacccgccgtgccccttcccaccggacgacgccttcggcctggtcccgcacaccgacagcgacttcctcaccgtgctctgccaggaccacgtcggcggcctgcagctcatgaagggctcccgctgggtcgccgcgtggagcaacaacaggtacaagagcgtggagcacagggtgatgacgaacgcgacgacggagagatactccgtcgcctacttcctctgcccgtcgtacgactcgcccatcggcacgtgcagggagccttccccttacaaggcgttcaccttcggggagtacaggcgaagggtgcaggaagacgtcaagaagacggggaagaagactggcctcagtaatttcctcgtatga
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| Protein seq | MPAIADCAADPPLADSYYALLRLGGDDDDDACTKVTTTPQPVSECELPMIDVGCLTAPTGAAAAAAVGQQHQAEERAACAAAIAAAAAEWGFFQVVNHGVAQELLEAMRREQARLFRLPFEAKSSAGFLNDSYRWGTPTATSLRQLSWDVTREVADAMSRLARALARVLAESLLGHAAGERFPEGCDDATCFLRLNRYPPCPFPPDDAFGLVPHTDSDFLTVLCQDHVGGLQLMKGSRWVAAWSNNRYKSVEHRVMTNATTERYSVAYFLCPSYDSPIGTCREPSPYKAFTFGEYRRRVQEDVKKTGKKTGLSNFLV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.239700 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0630300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g41954 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0630300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0026020 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0021050 | RBH | 0.0 | 0.000000 | 0.521289 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0025980 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0025560 | RBH | 0.0 | 0.041510 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0025670 | RBH | 0.000000 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0409600 | RBH | 0.0817315 | 7.356174 | 55.209991 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0025550 | RBH | 0.0 | 0.0 | 0.223163 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0438400 | RBH | 0.082054 | 6.0916635 | 3.018031 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0025770 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0025550 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0025880 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0025780 | RBH | 0.0 | 0.174254 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0025350 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G025960 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0025800 | RBH | 0.0 | 0.0 | 0.0 |
