Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_04g0012860 | OGI:04062320 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr04:18524604-18533655 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gaaccaccaataactgagaagtccatagaaacaacatagctaggttatttaggtccaatagtgagttttatttacaaaggttgaaaggtagtatctcaaagtttgacatcacaagagatgcaccaacaaaaacgaaattggatttaaggaaattgttctgtctccatgcatgacatcttcaacacaaacacacaaggctattttttttttcttagtcggaccgggacgcaatgaacttgatcaggtcatatcccttctttgggggaggtggtgctctggccaggacagggtactcgttttcatccatgccctgcttccttgcattctttgggcaccagacgcctagctgctccttccttgctacctcctggaattcctcaagcttcttgatggctgccctcctctccctcgagtcccatctcctcctctcaagttgaccataccctctctgcaaatggagagatacacaatggttatcacatgatttttttttcaaaagaaatctaaaataagtcagcaacacaaaatcttagacatgtatttcaggagtttgagtatgtcaaggaacagatgttagtgaacacaacctacaatcttatatgctaaagttagtgaattccaaatgtaacgtaatttaacaatatatacttattataagaggttattcgtgattgaaaagaaaatattgaaaaataaattgcaatggaaaaaccccaaatcaggtctacaataaagtttttttttctgtgtgcttataagctaaaggtcgataggggtgaaaacaaccactagaactaattaactaacttcaatatataaataccatttaagtgaaaactctgtctagaattgcatacctctagcatctcagcattgatgctattgtcggtctcactatcgagtagagtcacgccgaggatttctccggttccctgaccctgcaatttccctcccgaagcagcatctcgctcttcgacaatagcctcaaattctctcccattgtcaagcaaaatactgttcagatacatagctgcctcttgcccaagatagtcatttagactgggcaccttcacaaaggcaaggctgcacagctttgcaaggggaggaatagaggaaatggatagattgataggtctcaggcaactgtgaggaacaagttcttggtttccatagtcaatgtaaaatacttcaaactcaggtccttcaactccctgacactcacctataatctgtaaaagagtaggtgttcatattatgttataataatgccatacttacatgaatggatgcaacatgattttatatatatgtaagaaaaaaaagtaaaagattaccatggctctgttccatgaattgtcgcagcggaacaatgcaagcaccatttctcccttcataggagtaaatggagctgtgtttgaatcatctggtaatgggtctatatccttagaagttactgattcatccttagccacatcagaagatgggtcttcggcatccaaagtttcaggtaaatcttttgtcaaagtagcaacctcttttgaagtttccagctctttcacttctaaagcttcagctggatcatccttaatgtctaaagaagcaagctgatgacgtacgaactccacatgttcatcagcaagtgcttggacataaaacattccagcacctagcacttcagtgacaataaccttaaagaaataataagtcgagttagcatagtatttttgatacatttaactatatagaacattaaattcaacaaacaaacctttagagtctctttattatcataaagagagacgttggaaacttcaacttcctcgtagttctcccatacctttaaattaataagtgatttaacatattttttttattttagagataataaagagccagcattagaagaaatttatttaacctattaaaaatagatgtgtctaaccttcaatttcttttgctttgcaattttttcagtctttaagagaacctgagcatctggcatcttatccactgcaaatgagctgatcttagcaagaccagcctccaaaagaaccgaagccacattgatattagattcccataaggaacctaagaatgttccagttctatcaactgtgttgatctcaatctgcaaagtcattcaaaattcttagaaaatgaaaacaattttaattatactgattgaaggctctcctaggagagcccaacattaatcctaatggatgaaaaaaaaacagctataaagagcccaacggcccaacatattagtgggtaaaagaaagcttaattcccacataaatagaaaattctataaattttcaactctattctataaatgttcaactctactgtatagatttagtttctagccataaaagaaagggaagagttcctgttgaactacggtatagatttagtttctacactatatatcatatactagtatatatctactgttgaattgttattaaggtcatgaccatgtacctgcagtgctgcatccgaaagtgtccaaaccaaattacagaacaaaaggatggcagccctaatttagttggttgattgtaaattgtaagtatgtacatattgcgatgctagctaggttgtgggaataaaaattagtttttgcaagataatatggaacgatttcttttaagttaatcgactaaagtagcctaatttaaatactaggtttttgttcattatctaattatatataaatatacaattatagttatggatcctgcatggtagactttaggcaatattataaatataaatttaatgaacataaaaaagatttgttccaaacaataattttagggctgaattaaatttgaattatggtaaataagaaatataaaatataaaaaatcagaatatataaattaaaaaggaatatgtgagttaaatttccaaaaaaaaatagagacattattgcgcttcatttccatgtagaaattaaaacatacctactctctccgtcccaaaatataagcatttttagaatagtgacaagtcaaactttttaaattaattttgactattaatagcaaagaaataaaaaatatcaatactactccctctgtctcaaaatataagcatttttaaatagtgacaagtcaaactttttaaattaattttgactattaatagcaaaaaaataaaaaatatcaatcatgtaaatttgatgttactagatttaccattaaacgaacaattataatatgcaaatctttttatttaaacatcttatttttatagatattattagtcaaaatagcatctcgaaaaccatatcgagatccaaaaataattatattttgagacatagggaatattatatagcttgtcaaacaaatgaacacaaaagctaaaagctaaagcaccggacataaagaattaatgtacctcgacattccgttgtaatatccttctcctcatcattgtgatggcctcatcagagtagggctcatctctaccggggcaccgaacaccagaaagcgcgaatgcaatggtgcaagtctctttagggatcgtcactttgaaacgatggccgctgaaaacgtactcaacaattgcggaatgcctcctgctgcgttgcaacaggtgaaggaattccttcgcctttttgggtacctgtcaagacagaattggaggccacttaaaatgttatataagcaaaggttcataaataacaaagttaaaaattctaaatgacaaggttgctttaaaacggcctgcctgcgtaagtaattaaaagggggccgtctacgaaaatactttccgtagtacttcctccgtttcatattataaatcgtttgacgtttcatattataaactttgttaagtttgatcaagtttataaaaaatttgtgcagcatataaagtatcaaattagtttctttaaatctaacactgaatatatttgacaatatgtatgttttgtgtcgaaaatataccactatatttttctataaacttaattaaattttaaaaaatttaactagaaaaaaaaagtcaaccaacttataatatactccccccgtttcaaaatgtttgacaccgttgactttttagcacgtgtttgaccgttcgtcttattcaaaaaattttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaataataaataattacttaaattttttaaataaaacgaatggtcaaacacgtactaaaaaatcaacggtgtcaaacattttgaaacggagggagtattataaaacggagtagatagtgtttaccctcgtcaaatctgtcatatgaataggagggcactccttcttggagtggtagcctttcttcgtcttctcagctcgcgcatgggcagctatgagagcatcgtagtgatgcgacctgtcctcgtagtcacggtgcctggtgatgtcggctaatccgcgcgagaccagcagcgccgcaacgttgatcccgagctgattattgctgctgtccgagctactagtagcggtttctccatcagcatgcgatgagctgggaaggaacaccgacccgtactccaaaactctggtttcagtcgagttagttctcgggccagcaatctgtccgtctgcaatgttgatcctcctcgagtactccattgagacgttgacctgaaaaattaggggtgaattttgaataagagtgatgttcataacgctgaataattaaaagggaaacaagattctgtaggggcttcgtgatgattatgcatgttatgtaattataattattaagcgtgcttacttgttttccaatcagtcttgtgcgcaggaattcctttgctgtgcgagcaaattgttcagaggatttgttctcctctgaaggcttttcaaacttggggggtctgatgcttgaaagattaactcggcgttctgctgaaggactgccataaggttcagcgtcatcagcgatgactaggcagtacccgttcacaacctctatcacctggaaaattaaacaaccattcacagggtcagctgtgttgctgtgctgcagaatctgatattttctttcttatagttataaggtagatgtagttgaataggagtaattggtacatataaaaaactgcaaataaaagtaattatatattatggatcatcatgctgaagtgcaagctgctacaaggtactgcagcaagagatgggaagtgattttaataagttatagggcatgtgacatgttttgttcccatgtgattcaatattaatggttcctgaaaattttgactaacataatgctacagattattgtatcacatatcttctcataaacatgtaaggtcaaattcaattcacaatgtattgtgagaaacagaagtgataaaactaattactaggcggccatattttttcatgtactctagagagaacttgagctttcacgtttccatagtaataaatgacaccataatatatgtgttcaattgaatttaagagaaaaatgagcaattgaaatttgaaaatcattagtgtccaaaaatggaagaaaatggatggtcaagaccactcacttttcctgtgaacttttggttgtgaattggctttgtgtttgtcaccgggggcttaaatccagtccagattcttaactgttccttcttaacctgaagatcagcattcctcaactttgtcttaagttgaggatcaagcacatttgcactccattcaacatactttgcgagtccctatacaatgtgacaagaacattggtaagtggagtgaaaggaaaatttgagtggtacgacatggagaaacaatattcgtcatacattttgaaccagatcaagtgccaagtcctttacaacatccccatcagaataataaactgaaccaaatatgttgttgaaattgtctgtaccctccatcacaatccgcacctaaaggcaaatggaaaaaaagatagtgatcagaaattatatcttttacaatatgtttacactaataaacccccacaaattagcatggtattgacagtaacaatacatatgaaaactgaaaaaaaataataacttacttctctgttaagcacccgtgtctcggtgaagtgcttagcttcttgtccaaacctgtctggtgggacttcagaataaatgtcagctgatgccaatagtttctgtgctgctgccattggtgctggagtagtggaagcttctccatttgctgcgccattgccaactccagcttgagcatttgggggaggagttgctcgtcttcccatggatggggcctggatcatagtacaaaatcaaagttcgtcatccaagcagttaacattaacagattcatgtatatttacatgtttatatataataatgctcaagatgtacaaacattaaaaggatctataaaagaatatatataactcaaacttactatcaacaaattgtgttatactacttgctaaagtaactgtcataataattattatatcatacagactagtgagaacaaagactgattagaagcatgcaatcaatacacagttcaaatcttgaaaacataaataaaacgaatggagaaaatgcatgtgattaataaataatatacacctcatatttagtgttggttgataaaactttaatcaggttgccatggtcctaattatcctcaactagcattcatccatggtagcatatacgattacatataatgtatataaaaggggctacacatcagctccatacctggacgccagcaacgtaaacttggacataaaggaaactgggaatcaagtgcacacgaatagtacttccatcgcgaacatgctctacaatggcttccaagctcttccctttgttttcagcaacgaaacccttggcatcgaaagatctgccatctccaattgtcgatggtggcagatctcttattgacgactcaagagcgccaggaagctggaagtaaaacgagatagatatatgcatcagtgatatgatcatagatatgatggtgcggcagcgcatgttgtgtcgtcgtaagacaaaacgggaaacgattctaaactctcgagagaactttccctcccgttatttgtatgtcattcaaacagttacaaaaaagacgaaatactagaactaaccttgctccaacggcctaagccttggtccctggcaatcgtctccagccttagcaactcagcaacatacgggcttatttctcccttctgcccttgctctttcacctgatctcggccaaagcaaaaaaaaaaaaacactcaattcagaatcgagcatgatcatcatcaatcgatacaaattaacacgataactagctagagagagagagagaaaaaaaaatgcagtagttcttaccttagcaagacctgcagctactaccatgcaagcgacattcttctcagcaaagaagaccatgccgaatttgcggcccgagggagaagcagtgtattctactcgaaacctgacgtcttgtccgatgaggagcctcctcaggtactccctgctctcccatgcgaaaggctcgtccatcccaccgcgtcgagcctgcaattgcataataaacataatagtagtatgtgagccaatatatatagcttgtatgaatgtatttgcaccagctgcaacaagctaacaagccgatcgaggataccaattaagcccaaaaccttgtagacattactcaaggaaggcccacaattcaacaacacgagaggcgtcaatgggcttcggcatactttcttctacgagaaattttataggaagattacactggaaattttggtactacctccaagtacttatttgtagtactagaggtaaccataatttctagaataaaatttggtatctcagtagctcgaggtaccaaaaaatttcattaagaatggtaaaattacccttcttttaatgtttgagcttttacccaatcatcaaaattgagatgttcttgtccattaacattattactcctatgaattctaatatgactaaactaccatgggcaggtaattctaatgagatttactccggtccaacaaaaagtatctcgaggtaccggtacctcacggtactaaattatttctaatcgttagatcttgttgggcgggatgggtattgttagatccaacgatcggaaacgatttggtaccatgaggtaccagtaccttgaggtactttttgttggaccggagaaaatcttaaattctaatatgtttttgaagttgtattttcttcaaacgtacacgcacatatatataagattgataatttgaagttgtattttcttcaaacgtacagatatatataagattgatgaaataccctccttggcgatcgatcgatcagagatcttaccaggctgggcgcgatgatgcacgacagcgtgacggacatctccggcggcgggatgacctcctccgccttggatgtgtccatgatcaccaccgtatctcccgacgggacggacttcactttccccttccacaccggcgccgccgccggcacggcgccaccggtcaccatggtaagaagctagtagctagattaggctccctgcaacgagataagaattcgttaattagcaaactaaagaacaaggtaaaaaaaaaagaaggcattcatgcaagcattatgtttgcgtgatcgatcgatcgatcgatcacgcagatcacagcgattctagaggtgttatgaggctgcactcaatcgattaaatttcaacttatcaaattgcactatacattggtaccaatcaatcgattaattacgtacaaagatcaagttatcaaatctgatcgatctggaccaaattaaacacgtacgtatatagatgtggatcaagggaagattttatatatggtaatcgatcaaaagaacccaatcaagaccaaattaaaagaagggcatgcatatgcatgtaagtctctaaaacctaattaactaatccaaggagaaagaaaaaactcaccggccgaactagatgcgacgtcggcggatctcgcgagtgcctcgtactgtcgtcgagggttttgggtgtctttgc
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| CDS seq | atggtgaccggtggcgccgtgccggcggcggcgccggtgtggaaggggaaagtgaagtccgtcccgtcgggagatacggtggtgatcatggacacatccaaggcggaggaggtcatcccgccgccggagatgtccgtcacgctgtcgtgcatcatcgcgcccagcctggctcgacgcggtgggatggacgagcctttcgcatgggagagcagggagtacctgaggaggctcctcatcggacaagacgtcaggtttcgagtagaatacactgcttctccctcgggccgcaaattcggcatggtcttctttgctgagaagaatgtcgcttgcatggtagtagctgcaggtcttgctaaggtgaaagagcaagggcagaagggagaaataagcccgtatcttcctggcgctcttgagtcgtcaataagagatctgccaccatcgacaattggagatggcagatctttcgatgccaagggtttcgttgctgaaaacaaagggaagagcttggaagccattgtagagcatgttcgcgatggaagtactattcgtgtgcacttgattcccagtttcctttatgtccaagtttacgttgctggcgtccaggccccatccatgggaagacgagcaactcctcccccaaatgctcaagctggagttggcaatggcgcagcaaatggagaagcttccactactccagcaccaatggcagcagcacagaaactattggcatcagctgacatttattctgaagtcccaccagacaggtttggacaagaagctaagcacttcaccgagacacgggtgcttaacagagaagtgcggattgtgatggagggtacagacaatttcaacaacatatttggttcagtttattattctgatggggatgttgtaaaggacttggcacttgatctggttcaaaatggactcgcaaagtatgttgaatggagtgcaaatgtgcttgatcctcaacttaagacaaagttgaggaatgctgatcttcaggttaagaaggaacagttaagaatctggactggatttaagcccccggtgacaaacacaaagccaattcacaaccaaaagttcacaggaaaagtgatagaggttgtgaacgggtactgcctagtcatcgctgatgacgctgaaccttatggcagtccttcagcagaacgccgagttaatctttcaagcatcagaccccccaagtttgaaaagccttcagaggagaacaaatcctctgaacaatttgctcgcacagcaaaggaattcctgcgcacaagactgattggaaaacaagtcaacgtctcaatggagtactcgaggaggatcaacattgcagacggacagattgctggcccgagaactaactcgactgaaaccagagttttggagtacgggtcggtgttccttcccagctcatcgcatgctgatggagaaaccgctactagtagctcggacagcagcaataatcagctcgggatcaacgttgcggcgctgctggtctcgcgcggattagccgacatcaccaggcaccgtgactacgaggacaggaggcattccgcaattgttgagtacgttttcagcggccatcgtttcaaagtgacgatccctaaagagacttgcaccattgcattcgcgctttctggtgttcggtgccccggtagagatgagccctactctgatgaggccatcacaatgatgaggagaaggatattacaacggaatgtcgagattgagatcaacacagttgatagaactggaacattcttaggttccttatgggaatctaatatcaatgtggcttcggttcttttggaggctggtcttgctaagatcagctcatttgcagtggataagatgccagatgctcaggttctcttaaagactgaaaaaattgcaaagcaaaagaaattgaaggtatgggagaactacgaggaagttgaagtttccaacgtctctctttatgataataaagagactctaaaggttattgtcactgaagtgctaggtgctggaatgttttatgtccaagcacttgctgatgaacatgtggagttcgtacgtcatcagcttgcttctttagacattaaggatgatccagctgaagctttagaagtgaaagagctggaaacttcaaaagaggttgctactttgacaaaagatttacctgaaactttggatgccgaagacccatcttctgatgtggctaaggatgaatcagtaacttctaaggatatagacccattaccagatgattcaaacacagctccatttactcctatgaagggagaaatggtgcttgcattgttccgctgcgacaattcatggaacagagccatgattataggtgagtgtcagggagttgaaggacctgagtttgaagtattttacattgactatggaaaccaagaacttgttcctcacagttgcctgagacctatcaatctatccatttcctctattcctccccttgcaaagctgtgcagccttgcctttgtgaaggtgcccagtctaaatgactatcttgggcaagaggcagctatgtatctgaacagtattttgcttgacaatgggagagaatttgaggctattgtcgaagagcgagatgctgcttcgggagggaaattgcagggtcagggaaccggagaaatcctcggcgtgactctactcgatagtgagaccgacaatagcatcaatgctgagatgctagagagagggtatggtcaacttgagaggaggagatgggactcgagggagaggagggcagccatcaagaagcttgaggaattccaggaggtagcaaggaaggagcagctaggcgtctggtgcccaaagaatgcaaggaagcagggcatggatgaaaacgagtaccctgtcctggccagagcaccacctcccccaaagaagggatatgacctgatcaagttcattgcgtcccggtccgactaa
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| Protein seq | MVTGGAVPAAAPVWKGKVKSVPSGDTVVIMDTSKAEEVIPPPEMSVTLSCIIAPSLARRGGMDEPFAWESREYLRRLLIGQDVRFRVEYTASPSGRKFGMVFFAEKNVACMVVAAGLAKVKEQGQKGEISPYLPGALESSIRDLPPSTIGDGRSFDAKGFVAENKGKSLEAIVEHVRDGSTIRVHLIPSFLYVQVYVAGVQAPSMGRRATPPPNAQAGVGNGAANGEASTTPAPMAAAQKLLASADIYSEVPPDRFGQEAKHFTETRVLNREVRIVMEGTDNFNNIFGSVYYSDGDVVKDLALDLVQNGLAKYVEWSANVLDPQLKTKLRNADLQVKKEQLRIWTGFKPPVTNTKPIHNQKFTGKVIEVVNGYCLVIADDAEPYGSPSAERRVNLSSIRPPKFEKPSEENKSSEQFARTAKEFLRTRLIGKQVNVSMEYSRRINIADGQIAGPRTNSTETRVLEYGSVFLPSSSHADGETATSSSDSSNNQLGINVAALLVSRGLADITRHRDYEDRRHSAIVEYVFSGHRFKVTIPKETCTIAFALSGVRCPGRDEPYSDEAITMMRRRILQRNVEIEINTVDRTGTFLGSLWESNINVASVLLEAGLAKISSFAVDKMPDAQVLLKTEKIAKQKKLKVWENYEEVEVSNVSLYDNKETLKVIVTEVLGAGMFYVQALADEHVEFVRHQLASLDIKDDPAEALEVKELETSKEVATLTKDLPETLDAEDPSSDVAKDESVTSKDIDPLPDDSNTAPFTPMKGEMVLALFRCDNSWNRAMIIGECQGVEGPEFEVFYIDYGNQELVPHSCLRPINLSISSIPPLAKLCSLAFVKVPSLNDYLGQEAAMYLNSILLDNGREFEAIVEERDAASGGKLQGQGTGEILGVTLLDSETDNSINAEMLERGYGQLERRRWDSRERRAAIKKLEEFQEVARKEQLGVWCPKNARKQGMDENEYPVLARAPPPPKKGYDLIKFIASRSD |
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| Function | Ribonuclease TUDOR 1 [UniProtKB/Swiss-Prot:Q8VZG7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_04g0012860 | OsKeNa_04g0012860.01 | Chr04 | 18524604 | 18533655 | - | NAM | ||
| CDS seq | atggtgaccggtggcgccgtgccggcggcggcgccggtgtggaaggggaaagtgaagtccgtcccgtcgggagatacggtggtgatcatggacacatccaaggcggaggaggtcatcccgccgccggagatgtccgtcacgctgtcgtgcatcatcgcgcccagcctggctcgacgcggtgggatggacgagcctttcgcatgggagagcagggagtacctgaggaggctcctcatcggacaagacgtcaggtttcgagtagaatacactgcttctccctcgggccgcaaattcggcatggtcttctttgctgagaagaatgtcgcttgcatggtagtagctgcaggtcttgctaaggtgaaagagcaagggcagaagggagaaataagcccgtatcttcctggcgctcttgagtcgtcaataagagatctgccaccatcgacaattggagatggcagatctttcgatgccaagggtttcgttgctgaaaacaaagggaagagcttggaagccattgtagagcatgttcgcgatggaagtactattcgtgtgcacttgattcccagtttcctttatgtccaagtttacgttgctggcgtccaggccccatccatgggaagacgagcaactcctcccccaaatgctcaagctggagttggcaatggcgcagcaaatggagaagcttccactactccagcaccaatggcagcagcacagaaactattggcatcagctgacatttattctgaagtcccaccagacaggtttggacaagaagctaagcacttcaccgagacacgggtgcttaacagagaagtgcggattgtgatggagggtacagacaatttcaacaacatatttggttcagtttattattctgatggggatgttgtaaaggacttggcacttgatctggttcaaaatggactcgcaaagtatgttgaatggagtgcaaatgtgcttgatcctcaacttaagacaaagttgaggaatgctgatcttcaggttaagaaggaacagttaagaatctggactggatttaagcccccggtgacaaacacaaagccaattcacaaccaaaagttcacaggaaaagtgatagaggttgtgaacgggtactgcctagtcatcgctgatgacgctgaaccttatggcagtccttcagcagaacgccgagttaatctttcaagcatcagaccccccaagtttgaaaagccttcagaggagaacaaatcctctgaacaatttgctcgcacagcaaaggaattcctgcgcacaagactgattggaaaacaagtcaacgtctcaatggagtactcgaggaggatcaacattgcagacggacagattgctggcccgagaactaactcgactgaaaccagagttttggagtacgggtcggtgttccttcccagctcatcgcatgctgatggagaaaccgctactagtagctcggacagcagcaataatcagctcgggatcaacgttgcggcgctgctggtctcgcgcggattagccgacatcaccaggcaccgtgactacgaggacaggaggcattccgcaattgttgagtacgttttcagcggccatcgtttcaaagtgacgatccctaaagagacttgcaccattgcattcgcgctttctggtgttcggtgccccggtagagatgagccctactctgatgaggccatcacaatgatgaggagaaggatattacaacggaatgtcgagattgagatcaacacagttgatagaactggaacattcttaggttccttatgggaatctaatatcaatgtggcttcggttcttttggaggctggtcttgctaagatcagctcatttgcagtggataagatgccagatgctcaggttctcttaaagactgaaaaaattgcaaagcaaaagaaattgaaggtatgggagaactacgaggaagttgaagtttccaacgtctctctttatgataataaagagactctaaaggttattgtcactgaagtgctaggtgctggaatgttttatgtccaagcacttgctgatgaacatgtggagttcgtacgtcatcagcttgcttctttagacattaaggatgatccagctgaagctttagaagtgaaagagctggaaacttcaaaagaggttgctactttgacaaaagatttacctgaaactttggatgccgaagacccatcttctgatgtggctaaggatgaatcagtaacttctaaggatatagacccattaccagatgattcaaacacagctccatttactcctatgaagggagaaatggtgcttgcattgttccgctgcgacaattcatggaacagagccatgattataggtgagtgtcagggagttgaaggacctgagtttgaagtattttacattgactatggaaaccaagaacttgttcctcacagttgcctgagacctatcaatctatccatttcctctattcctccccttgcaaagctgtgcagccttgcctttgtgaaggtgcccagtctaaatgactatcttgggcaagaggcagctatgtatctgaacagtattttgcttgacaatgggagagaatttgaggctattgtcgaagagcgagatgctgcttcgggagggaaattgcagggtcagggaaccggagaaatcctcggcgtgactctactcgatagtgagaccgacaatagcatcaatgctgagatgctagagagagggtatggtcaacttgagaggaggagatgggactcgagggagaggagggcagccatcaagaagcttgaggaattccaggaggtagcaaggaaggagcagctaggcgtctggtgcccaaagaatgcaaggaagcagggcatggatgaaaacgagtaccctgtcctggccagagcaccacctcccccaaagaagggatatgacctgatcaagttcattgcgtcccggtccgactaa
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| Protein seq | MVTGGAVPAAAPVWKGKVKSVPSGDTVVIMDTSKAEEVIPPPEMSVTLSCIIAPSLARRGGMDEPFAWESREYLRRLLIGQDVRFRVEYTASPSGRKFGMVFFAEKNVACMVVAAGLAKVKEQGQKGEISPYLPGALESSIRDLPPSTIGDGRSFDAKGFVAENKGKSLEAIVEHVRDGSTIRVHLIPSFLYVQVYVAGVQAPSMGRRATPPPNAQAGVGNGAANGEASTTPAPMAAAQKLLASADIYSEVPPDRFGQEAKHFTETRVLNREVRIVMEGTDNFNNIFGSVYYSDGDVVKDLALDLVQNGLAKYVEWSANVLDPQLKTKLRNADLQVKKEQLRIWTGFKPPVTNTKPIHNQKFTGKVIEVVNGYCLVIADDAEPYGSPSAERRVNLSSIRPPKFEKPSEENKSSEQFARTAKEFLRTRLIGKQVNVSMEYSRRINIADGQIAGPRTNSTETRVLEYGSVFLPSSSHADGETATSSSDSSNNQLGINVAALLVSRGLADITRHRDYEDRRHSAIVEYVFSGHRFKVTIPKETCTIAFALSGVRCPGRDEPYSDEAITMMRRRILQRNVEIEINTVDRTGTFLGSLWESNINVASVLLEAGLAKISSFAVDKMPDAQVLLKTEKIAKQKKLKVWENYEEVEVSNVSLYDNKETLKVIVTEVLGAGMFYVQALADEHVEFVRHQLASLDIKDDPAEALEVKELETSKEVATLTKDLPETLDAEDPSSDVAKDESVTSKDIDPLPDDSNTAPFTPMKGEMVLALFRCDNSWNRAMIIGECQGVEGPEFEVFYIDYGNQELVPHSCLRPINLSISSIPPLAKLCSLAFVKVPSLNDYLGQEAAMYLNSILLDNGREFEAIVEERDAASGGKLQGQGTGEILGVTLLDSETDNSINAEMLERGYGQLERRRWDSRERRAAIKKLEEFQEVARKEQLGVWCPKNARKQGMDENEYPVLARAPPPPKKGYDLIKFIASRSD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.724653 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0402200 | RBH | 0.0 | 0.0 | 2.578664 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g32960 | RBH | 0.0 | 0.0 | 0.728867 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0402200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0012060 | RBH | 0.0 | 0.0 | 4.064134 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0019460 | RBH | 1.077752 | 35.751858 | 15.703512 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0012550 | RBH | 0.0 | 0.0 | 8.518587 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0012200 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0012490 | RBH | 0.0 | 0.0 | 11.449560 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0313800 | RBH | 0.0217155 | 0.002959 | 0.026341 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0011420 | RBH | 0.0 | 0.0 | 1.007524 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0310700 | RBH | 0.029882 | 0.087722 | 0.0710145 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0012050 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0011640 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0011650 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0012200 | RBH | 0.0 | 0.0 | 1.011545 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0012400 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G011570 | RBH | 0.096039 | 0.0 | 1.752929 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0011560 | RBH | 0.0 | 0.0 | 7.438200 |
