Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_04g0010680 | OGI:04058110 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr04:16443460-16444368 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctagaggtaagggttgccctcgaatcccttggcgcagttgcagatgtagcctggtccgctggacgagttgacgcacgcactgttcatgctgacgcaggcttacgattctcggtttttccgcgcctccacgcagttgctcgcgttccggacggcccattcgaccaccacgggcactctcccgccgttggcgtcgaagaattccgacgatgtcgcgtagctcctcctgaagctaaagctcgacgactccatcagcgccgcgtagctgcagcggctgacgttgtagatatccttcgagctgttgaacactgtcgagtagttctggaactcgacctggtaggcgttaaaccccttcgttatcgttgtctggcagcagcctgccccggagcaggcgccgtcggcgaggcgatcgccgcgtcgcccgcagttggtcgccacgcacccgctcaggaaacgcacgatgttatcggcggaatctccgaccccgacgacggccaccgcctgacacccgacgacggcgaacgtgttgccggcctgagagagcctgtacggatcagcgaagctcaccacatccatgatggtttgggaggtgtcgttgcagtaggaggagatgttgttccacacgcgggcctgaccatcggacagggacacgccggccagctcgaagtgtccgccgtgccccaagaatggcttcttgccgccattgttggtgtcgcggcaggtgagctcgaagccgggcaacgcgcagcctgcagggccgatgccgaacgggtaggggatatcgacgccgccgcacgccgtcgagcagttgctgctgccaggaggcggcggcggcgctccaacggcggcgagcagtgccgaatggcctatactaattagcaacaatattgctgctaatttctggagctgcat
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| CDS seq | atgcagctccagaaattagcagcaatattgttgctaattagtataggccattcggcactgctcgccgccgttggagcgccgccgccgcctcctggcagcagcaactgctcgacggcgtgcggcggcgtcgatatcccctacccgttcggcatcggccctgcaggctgcgcgttgcccggcttcgagctcacctgccgcgacaccaacaatggcggcaagaagccattcttggggcacggcggacacttcgagctggccggcgtgtccctgtccgatggtcaggcccgcgtgtggaacaacatctcctcctactgcaacgacacctcccaaaccatcatggatgtggtgagcttcgctgatccgtacaggctctctcaggccggcaacacgttcgccgtcgtcgggtgtcaggcggtggccgtcgtcggggtcggagattccgccgataacatcgtgcgtttcctgagcgggtgcgtggcgaccaactgcgggcgacgcggcgatcgcctcgccgacggcgcctgctccggggcaggctgctgccagacaacgataacgaaggggtttaacgcctaccaggtcgagttccagaactactcgacagtgttcaacagctcgaaggatatctacaacgtcagccgctgcagctacgcggcgctgatggagtcgtcgagctttagcttcaggaggagctacgcgacatcgtcggaattcttcgacgccaacggcgggagagtgcccgtggtggtcgaatgggccgtccggaacgcgagcaactgcgtggaggcgcggaaaaaccgagaatctgcgtgcgtcaactcgtccagcggaccaggctacatctgcaactgcgccaagggattcgagggcaacccttacctctag
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| Protein seq | MQLQKLAAILLLISIGHSALLAAVGAPPPPPGSSNCSTACGGVDIPYPFGIGPAGCALPGFELTCRDTNNGGKKPFLGHGGHFELAGVSLSDGQARVWNNISSYCNDTSQTIMDVVSFADPYRLSQAGNTFAVVGCQAVAVVGVGDSADNIVRFLSGCVATNCGRRGDRLADGACSGAGCCQTTITKGFNAYQVEFQNYSTVFNSSKDIYNVSRCSYAALMESSSFSFRRSYATSSEFFDANGGRVPVVVEWAVRNASNCVEARKNRESACVNSSSGPGYICNCAKGFEGNPYL |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_04g0010680 | OsKeNa_04g0010680.01 | Chr04 | 16443460 | 16444368 | - | NAM | ||
| CDS seq | atgcagctccagaaattagcagcaatattgttgctaattagtataggccattcggcactgctcgccgccgttggagcgccgccgccgcctcctggcagcagcaactgctcgacggcgtgcggcggcgtcgatatcccctacccgttcggcatcggccctgcaggctgcgcgttgcccggcttcgagctcacctgccgcgacaccaacaatggcggcaagaagccattcttggggcacggcggacacttcgagctggccggcgtgtccctgtccgatggtcaggcccgcgtgtggaacaacatctcctcctactgcaacgacacctcccaaaccatcatggatgtggtgagcttcgctgatccgtacaggctctctcaggccggcaacacgttcgccgtcgtcgggtgtcaggcggtggccgtcgtcggggtcggagattccgccgataacatcgtgcgtttcctgagcgggtgcgtggcgaccaactgcgggcgacgcggcgatcgcctcgccgacggcgcctgctccggggcaggctgctgccagacaacgataacgaaggggtttaacgcctaccaggtcgagttccagaactactcgacagtgttcaacagctcgaaggatatctacaacgtcagccgctgcagctacgcggcgctgatggagtcgtcgagctttagcttcaggaggagctacgcgacatcgtcggaattcttcgacgccaacggcgggagagtgcccgtggtggtcgaatgggccgtccggaacgcgagcaactgcgtggaggcgcggaaaaaccgagaatctgcgtgcgtcaactcgtccagcggaccaggctacatctgcaactgcgccaagggattcgagggcaacccttacctctag
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| Protein seq | MQLQKLAAILLLISIGHSALLAAVGAPPPPPGSSNCSTACGGVDIPYPFGIGPAGCALPGFELTCRDTNNGGKKPFLGHGGHFELAGVSLSDGQARVWNNISSYCNDTSQTIMDVVSFADPYRLSQAGNTFAVVGCQAVAVVGVGDSADNIVRFLSGCVATNCGRRGDRLADGACSGAGCCQTTITKGFNAYQVEFQNYSTVFNSSKDIYNVSRCSYAALMESSSFSFRRSYATSSEFFDANGGRVPVVVEWAVRNASNCVEARKNRESACVNSSSGPGYICNCAKGFEGNPYL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0367900 | RBH | 0.266532 | 0.273335 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g29950 | RBH | 0.130041 | 0.238287 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0367900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0009910 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010870 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010490 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010080 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010310 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0294400 | SBH | 0.056573 | 1.716228 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0010030 | SBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0279900 | RBH | 0.0821715 | 0.0530025 | 0.025258 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010110 | SBH | 0.018769 | 0.212470 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010220 | SBH | 0.0 | 1.179976 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010270 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010770 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010230 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009370 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009410 | SBH | 0.0 | 1.436895 | 0.0 |
