Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_04g0010490 | OGI:04058110 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr04:17514392-17517845 | ||||||||
| Gene Symbol | WAK49, OsWAK49, RLCK146, OsRLCK146 | ||||||||||
| DNA seq | tcacaatgcataggcatggtcacacacaactgaccagctcctccactctggatgaaaactcaatctctcacacacctacaaacgacaacataagaaatgatgtctatcaatcatctcgcaaactctatgctcggcacagctttcttcgagaggccataaaccccacttgttttgctcccaccataccatgcatgtagacatcgatgttctccctatccctgtaaagcttaggtcctcaagcaccaatggcggttgtgggtactgctgcacttcatctgctaatgctagccgtcggagctctatggccactagcatcattgtgggcctggttgtacctggaacaaccaagcattgattagctagaaccgcagcttgttggatcactcgcatgctagcttcatcaactatgtcgctatcaaggagctcgacaagtgtgccatttgccatagcttcctgaaacattgatgtgaagctctttctttcttttgaaaatggcctcctactagtgagaagctcgagaagaatgactccaaagctatatacatcgttgctggctgtgagctggtactcgagtggatagtccggatcaatatagcctggtgtaccttttggcacaacctgggttttctcatcgattgttgaacaaccaaagtcggacaccttcgcaaccaatccctctgcgagaagaatgttggctggcttcacatcgccgtggagtattggacgtggcagcgagtggagatgtgcaaatgcatctgcggattctgcagcgatccttagacgtgttcctagtgtgacatgaaacctcttgctcctctggagatccaacagctcttgtagtgttttgttttgcacaaactcgtagacaagcataggtgcctcaaactgaaggcaacaacccaacagcctaatgatgttggtatggttgacgcgacaaaggatgaccaactcctgcacaaagtccatttttttgctctcattaatctccttgcacctctttattgccacggtagtgccatctatcaccgctctgtaaacagttccctgtcctccttccccaataatgtgtgccttgttgaagttatttgttgcagtcttgatccgctctctctcatagagggtgaaccccgcattgccctctaccttcatcatttctagaaggagttgacctccgtgttgttgaaaaaactcatcagcctatcttaatagagcttgtttttttattctctgtttgtacctgatcaccccccatccaaggaaaccaaagagggcaaccaatgcacccgcaacaactcctgaacggacaaattggaagttgtaatcaatttatggtctaagcaagtatgttaacatcagtattgttttacgtttatgtaagccataaccaaatcaagtagatcaagagttttgtttacatttccacacgaaacacatcagaagtcaaacaaaaactagttatattgcaatggaattcaagatgtttgaagcctcaactatattgaaagtatatgcacgtgatgagatagagttggtataggtgcgtaccaattgctattcgtactccggatgttaagatgattttttggcatgctccttgaacaaaggcatttcctcgggtacccttagggcatgtacagtcgaaatgccctggtatatttttgcagtttccataacaagggtatttcttcggttctttacattcatcaatatctacacaaataattacatatagggaaattattgcatgaatagaagaaatttataatgaaaaaagttagcaatttagcattttttttggcatatgaattgaactccaaagaaaagaagacacaaatatatattaaataaacaatacagaatgataggtagatatatagtaagctcttgggtgctatcgcttcctcgccgattaaagttacacgaggatgcatttacaacattatggagatgtatttactagtaatgatgtctttgtaatcctagcaagtatttacaacttttcgacgatgtattagtactttgcaggaacatatttaattacaatcatgtgaaaaagcgctacttgcatgatggcagtggcggagctaggtttggaggagagggggggctcagccttcttcccctccccccccccccctttccttcttcctctccctcttttcccccttctcctctctcacaactcctaggagtccagcggggtagtgggggctcgagccccccccctctcctacccccacgctggctctaccgctgcatgatggtttctaggtatagcacttcccaaataacccatctgtcctaaaatataaacaaaattcgttccaaaatatcaaggattttcgtgttgatctcaatgttcaaactataccacggactcaacgatgtcatcgcgttctatataaaccttgtgataataatcaaattcaatatgtacggctttacgagagaagaaagaactagcctatacggtaagtgcaataagcatatatgaaactgtaggaaatatgacgaattagaaacacgctaaaacgatgggatggaactagaatctagaggaaacatattcacctaggcagccgtttgggaggtaagggttgccctcgaatcccttggcgcagttgcagatgtagcctggtccgctggacgagttgatgcacgcactgttcatgctgacgcaggcactgttcatgctgacgcaggcgtacgattctcggtttttccgcgcctccacgcagttgctcgcgttccggacggcccattcgaccaccatgggcaccttcccgccgttggtgtcgaagaattccgacgatgtcgcgtagctcttcctgaagctaaagctcgacgactccatcagcgccgcgtagctgcagcggctgacgttgtagatatccttcgagctgttgaacactgtcgagtagttctggaactcgacctggtaggcgttaaaccccttcgttatcgttgtctggcagcagcctgccccggagcaggcgccgtcggcgaggcgatcgccgcgtcacccgcagttggtcgccgcgcacccgctcaggaaacgcacgatgttatcggcggaatctccgaccccgacgacggccaccgcctgacacccgacgacggcgaacgtgttgccggcctgagagagcctgtacggatcagcgaagctcaccacatccatgatggtttgggaggtgtcgttgcagtaggaggagatgttgttccacacgcgggcctgaccatcgggcagggacacgccggccagctcgaagtgtccgccgtgccccaggaatggcttcttgccgccattgctggtgtcgcggcaggtgagctcgaagccgggcaacgcgcagcctgcagggccgatgccgaacgagtaggggatatcgacgccgccgcacaccgtcgagcagttgctgctgcccggcggcggcggcagcgctccaacggccgcgag
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| CDS seq | atggatgtggtgagcttcgctgatccgtacaggctctctcaggccggcaacacgttcgccgtcgtcgggtgtcaggcggtggccgtcgtcggggtcggagattccgccgataacatcgtcgagttccagaactactcgacagtgttcaacagctcgaaggatatctacaacgtcagccgctgcagctacgcggcgctgatggagtcgtcgagctttagcttcaggaagagctacgcgacatcgtcggaattcttcgacaccaacggcgggaaggtgcccatggtggtcgaatgggccgtccggaacgcgagcaactgcgtggaggcgcggaaaaaccgagaatcgtacgcctgcgtcagcatgaacagtgcctgcgtcagcatgaacagtgcgtgcatcaactcgtccagcggaccaggctacatctgcaactgcgccaagggattcgagggcaacccttacctcccaaacggctgcctagatattgatgaatgtaaagaaccgaagaaatacccttgttatggaaactgcaaaaatataccagggcatttcgactgtacatgccctaagggtacccgaggaaatgcctttgttcaaggagcatgccaaaaaatcatcttaacatccggagtacgaatagcaattggtcaactccttctagaaatgatgaaggtagagggcaatgcggggttcaccctctatgagagagagcggatcaagactgcaacaaataacttcaacaaggcacacattattggggaaggaggacagggaactgtttacagagcggtgatagatggcactaccgtggcaataaagaggtgcaaggagattaatgagagcaaaaaaatggactttgtgcaggagttggtcatcctttgtcgcgtcaaccataccaacatcattaggctgttgggttgttgccttcagtttgaggcacctatgcttgtctacgagtttgtgcaaaacaaaacactacaagagctgttggatctccagaggagcaagaggtttcatgtcacactaggaacacgtctaaggatcgctgcagaatccgcagatgcatttgcacatctccactcgctgccacgtccaatactccacggcgatgtgaagccagccaacattcttctcgcagagggattggttgcgaaggtgtccgactttggttgttcaacaatcgatgagaaaacccaggttgtgccaaaaggtacaccaggctatattgatccggactatccactcgagtaccagctcacagccagcaacgatgtatatagctttggagtcattcttctcgagcttctcactagtaggaggccattttcaaaagaaagaaagagcttcacatcaatgtttcaggaagctatggcaaatggcacacttgtcgagctccttgatagcgacatagttgatgaagctagcatgcgagtgatccaacaagctgcggttctagctaatcaatgcttggttgttccaggtacaaccaggcccacaatgatgctagtggccatagagctccgacggctagcattagcagatgaagtgcagcagtacccacaaccgccattggtgcttgaggacctaagctttacagggatagggagaacatcgatgtctacatgcatggtgtgtgagagattgagttttcatccagagtggaggagctggtcagttgtgtgtgaccatgcctatgcattgtga
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| Protein seq | MDVVSFADPYRLSQAGNTFAVVGCQAVAVVGVGDSADNIVEFQNYSTVFNSSKDIYNVSRCSYAALMESSSFSFRKSYATSSEFFDTNGGKVPMVVEWAVRNASNCVEARKNRESYACVSMNSACVSMNSACINSSSGPGYICNCAKGFEGNPYLPNGCLDIDECKEPKKYPCYGNCKNIPGHFDCTCPKGTRGNAFVQGACQKIILTSGVRIAIGQLLLEMMKVEGNAGFTLYERERIKTATNNFNKAHIIGEGGQGTVYRAVIDGTTVAIKRCKEINESKKMDFVQELVILCRVNHTNIIRLLGCCLQFEAPMLVYEFVQNKTLQELLDLQRSKRFHVTLGTRLRIAAESADAFAHLHSLPRPILHGDVKPANILLAEGLVAKVSDFGCSTIDEKTQVVPKGTPGYIDPDYPLEYQLTASNDVYSFGVILLELLTSRRPFSKERKSFTSMFQEAMANGTLVELLDSDIVDEASMRVIQQAAVLANQCLVVPGTTRPTMMLVAIELRRLALADEVQQYPQPPLVLEDLSFTGIGRTSMSTCMVCERLSFHPEWRSWSVVCDHAYAL |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0010490 | OsCMeo_04g0010490.01 | Chr04 | 17514392 | 17517845 | - | NAM | ||
| CDS seq | atggatgtggtgagcttcgctgatccgtacaggctctctcaggccggcaacacgttcgccgtcgtcgggtgtcaggcggtggccgtcgtcggggtcggagattccgccgataacatcgtcgagttccagaactactcgacagtgttcaacagctcgaaggatatctacaacgtcagccgctgcagctacgcggcgctgatggagtcgtcgagctttagcttcaggaagagctacgcgacatcgtcggaattcttcgacaccaacggcgggaaggtgcccatggtggtcgaatgggccgtccggaacgcgagcaactgcgtggaggcgcggaaaaaccgagaatcgtacgcctgcgtcagcatgaacagtgcctgcgtcagcatgaacagtgcgtgcatcaactcgtccagcggaccaggctacatctgcaactgcgccaagggattcgagggcaacccttacctcccaaacggctgcctagatattgatgaatgtaaagaaccgaagaaatacccttgttatggaaactgcaaaaatataccagggcatttcgactgtacatgccctaagggtacccgaggaaatgcctttgttcaaggagcatgccaaaaaatcatcttaacatccggagtacgaatagcaattggtcaactccttctagaaatgatgaaggtagagggcaatgcggggttcaccctctatgagagagagcggatcaagactgcaacaaataacttcaacaaggcacacattattggggaaggaggacagggaactgtttacagagcggtgatagatggcactaccgtggcaataaagaggtgcaaggagattaatgagagcaaaaaaatggactttgtgcaggagttggtcatcctttgtcgcgtcaaccataccaacatcattaggctgttgggttgttgccttcagtttgaggcacctatgcttgtctacgagtttgtgcaaaacaaaacactacaagagctgttggatctccagaggagcaagaggtttcatgtcacactaggaacacgtctaaggatcgctgcagaatccgcagatgcatttgcacatctccactcgctgccacgtccaatactccacggcgatgtgaagccagccaacattcttctcgcagagggattggttgcgaaggtgtccgactttggttgttcaacaatcgatgagaaaacccaggttgtgccaaaaggtacaccaggctatattgatccggactatccactcgagtaccagctcacagccagcaacgatgtatatagctttggagtcattcttctcgagcttctcactagtaggaggccattttcaaaagaaagaaagagcttcacatcaatgtttcaggaagctatggcaaatggcacacttgtcgagctccttgatagcgacatagttgatgaagctagcatgcgagtgatccaacaagctgcggttctagctaatcaatgcttggttgttccaggtacaaccaggcccacaatgatgctagtggccatagagctccgacggctagcattagcagatgaagtgcagcagtacccacaaccgccattggtgcttgaggacctaagctttacagggatagggagaacatcgatgtctacatgcatggtgtgtgagagattgagttttcatccagagtggaggagctggtcagttgtgtgtgaccatgcctatgcattgtga
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| Protein seq | MDVVSFADPYRLSQAGNTFAVVGCQAVAVVGVGDSADNIVEFQNYSTVFNSSKDIYNVSRCSYAALMESSSFSFRKSYATSSEFFDTNGGKVPMVVEWAVRNASNCVEARKNRESYACVSMNSACVSMNSACINSSSGPGYICNCAKGFEGNPYLPNGCLDIDECKEPKKYPCYGNCKNIPGHFDCTCPKGTRGNAFVQGACQKIILTSGVRIAIGQLLLEMMKVEGNAGFTLYERERIKTATNNFNKAHIIGEGGQGTVYRAVIDGTTVAIKRCKEINESKKMDFVQELVILCRVNHTNIIRLLGCCLQFEAPMLVYEFVQNKTLQELLDLQRSKRFHVTLGTRLRIAAESADAFAHLHSLPRPILHGDVKPANILLAEGLVAKVSDFGCSTIDEKTQVVPKGTPGYIDPDYPLEYQLTASNDVYSFGVILLELLTSRRPFSKERKSFTSMFQEAMANGTLVELLDSDIVDEASMRVIQQAAVLANQCLVVPGTTRPTMMLVAIELRRLALADEVQQYPQPPLVLEDLSFTGIGRTSMSTCMVCERLSFHPEWRSWSVVCDHAYAL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0372100 | SBH | 0.000000 | 0.000000 | 0.170390 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g30060 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0372100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0009910 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010660 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010070 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010310 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0293100 | SBH | 0 | 0.053278 | 0.0232095 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0010040 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0279900 | RBH | 0.0821715 | 0.0530025 | 0.025258 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010110 | RBH | 0.018769 | 0.212470 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010230 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010280 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010700 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010210 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009360 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009480 | SBH | 0.0 | 0.0 | 0.0 |
