Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_03g0036100 | OGI:03089740 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr03:33215389-33220482 | ||||||||
| Gene Symbol | RLCK117, OsRLCK117 | ||||||||||
| DNA seq | tatcacacacaatcccccttgtggccttgtgtgtagtgttctcaaaaccatagcaaacttgcaaaatacccccacctttccccttccctcctcccctcactccctctcactctcttgtctccactctcctctcctctcctcgccgcgagcgtgagctctcccctctcctctcttccaatccaagaagccaagaaaccccaatgcatctccgcctcctcctcctcctcgtcggcgtcgccgccgcggcggcggacgccgacgccgacgccgacgcgctgctggcggcgaaggccgccatgtcggacccgaccggcgcgctggcgtcgtggggcggcaacgggaccaggacgaacaccaccgccgccgccgcggcacactgcgcgtgggcgggcgtgacgtgcagctcccgcggcgcggtggttggcctcgacgtgtccgggctcaacctctccggcgcgctgccggcggagctgaccgggctccgcgggctcatgcggctgtccgtcggcgccaatgccttctccggccccatcccggcgtcgttggggcggctccagttcctcacctacctcaacctctccaacaacgcgttcaatggctccttcccggcggcgctcgcgcgcctccgggggctccgggtgctcgacctctacaacaacaacctcaccagcccgctccccatggaggtggtgcagatgccgctgctccgccacctgcacctcggcggcaacttcttctccggtgagatcccgccggagtacgggcggtggggccggatgcagtatctcgccgtctccgggaacgagctctccggcaaaatcccgccggagttggggaatctgacgagcctcagggagctgtacattggttactacaacagctactccggtgggctcccaccggagttggggaacctgaccgagctcgtccgcctcgacgccgccaactgcgggctctccggcgagataccgccggagctcgggaagctgcagaacctcgacacgctgttcttgcaggtgaacagcctcgccggcggcataccgtcggagctgggttacctcaagagcctgagttctttggacctatcgaacaatgtcctcaccggcgagattccggcgagcttctccgagctcaagaacctgacgctgctcaacctgttccggaacaagctgcgtggtgacatccctgatttcgtcggcgacctgcccagcctcgaggtgctgcagctctgggagaacaacttcaccggcggcgtgccgcgccgcctcggccgcaatggccgcctccagctgctcgacctctcgtcgaacaggctcaccggcacgctgccgccggagctctgcgccggtggcaagatgcacacgctcatcgcgcttggcaacttcttgttcggcgccatcccggactcccttggtgaatgcaagtccttgagccgtgttcgtcttggggagaactacttgaacggctcaattccgaagggtctctttgagctgccgaagctgacgcaggttgagctgcaagataacctcctcacaggcaatttcccggccgtgtccggcgctgcggcgcctaatcttggggagatcagcctgtccaacaaccagctcactggtgcgctgccggcatcaattggaaacttttctggtgttcagaagctgcttcttgatcggaattcattctctggtgtcgttccacctgagattgggcgactgcagaaactctccaaggctgaccttagcagcaatgcgcttgagggaggtgtaccaccggagattgggaaatgccggttgctcacttacttggacttgagccggaacaacatctctgggaagatacctccggccatctctggaatgaggatactcaactatctcaacctgtcccggaaccatcttgatggagagatacctccatccattgcaacaatgcagagcttgaccgcggttgacttctcatataacaacttgtctgggcttgtgccaggaactggtcaattcagctacttcaatgccacatcttttgttggtaacccaggcttgtgtggaccgtacctcggaccatgccgccctggtgttgctggcaccgaccatggtggtcatggtcatggcgggctatccaatggtgtcaaactgctcattgtcctaggcttgttggcctgctccattgcatttgctgtcggggcgattctgaaggctcggtcgttgaagaaagccagtgaggcacgtgtgtggaaactcacagcattccagcgcctcgacttcacctgtgatgatgtgcttgactgcttgaaggaagaaaacgttatcggcaaaggtggtgctggaattgtgtacaagggggctatgcctaacggagatcatgttgctgtgaagcgtctcccagctatgggccgtggctcttcacatgatcatggtttttcagcagagatacagacacttgggagaattcggcaccgccatattgtgcgtttgctaggcttctgctcaaacaatgagactaatttgctggtttatgaatacatgcccaatggaagcctgggggagctgctccatggcaagaaaggcgggcaccttcactgggacacccggtacaagatcgccattgaagctgcaaaggggctctgctaccttcaccatgattgttcccctttgatacttcaccgtgatgtcaagtcaaacaatatccttcttgactcagactttgaagcacatgtggctgactttggccttgcaaagttcttgcaggacaccggtgcatctgagtgcatgtctgccattgctggctcttatggatacattgctccaggtaaaacatcatatctcatggtatttcagttcgttctgcagtgtattgatagtattgtatttagttgcaaagtaatatttcctctggtaaaagaaatgtaagagtaattcttgaattgctgtttttagttcctcgtgctccttcatgaattgtgttgcttaataatctgacatgtctttgttcacttcaaatggactgaaccttgttggattgtatttttgtggatgtccagaatatgcatacaccctcaaggtcgatgagaagagtgatgtctacagctttggtgttgtgcttcttgagctggttactggacggaagcctgttggggagtttggagatggcgttgacatcgtccaatgggtgaggatgatgaccgactcaaacaaggaacaagtgatgaaggtcctggacccaaggctctcaacagttccacttcatgaggtcatgcacgtcttctatgtcgctttgctctgcattgaggagcagagcgtgcagcgtccaacaatgcgggaggttgtacagatcctcagcgagcttccaaagctagctcccaggcaaggagaagtgctttcacacgctgtcgatggttttgcatccaatcctccagctccagttccttctgggtctgcagaagcactaactggtgatgcgaaagatcaacagcagcagcaaacaaattcagagtcaactacacctcctgatctcatcagcatatgagtaaccaagtctaaaattgctgtcaaccttttgttgcaaagttcgcaagcttcagtatcggaaacttatctaggtatggatttaggtcttggtaagtttttaggtgttctgtgctgtacatattccagtttggtgggttgtcctgttaccagtttgtttcctttggtgctgcaatgtaggattccgtagcgagtttcggtactttagagccttttatcatccatcttcaatgtaggcaatggctttctatccaatttagaatcaaaatctaagctttactgtggaaccaagtttcctttaaagcacttcctgagttcctggtcctgtgtaaacagttcaagttgggtcctttaaattgagaaacccatactagaatgccatcatggaaaagcacccttgcatggtgaacagatatgcactaaatcaagcaaagtcaaagtattctgctctttttattcttttggagctgaatgaaatcaaagaatcagagtgcttcttcctttgttctcttttgtgatgtgtatagaaagctggcacaagaatggttaacaaatgattacccttttgtggctgctttgcataacatgaagtgcactattgcaacatcagattatgtgggatcagcatatatgggggagagaagaactgtgctaaaaatccacgctttctaatgtccaaaaatttttgttagcctgtttggaacaaatatttactataatctttttgcatattgaaatctggagtagtgaaataaattctgttaggaaaatcgctcaaattccatttaaaaaaatgcaaaatgaaatctggagattgacattcagagatcaagactctcccgagcatgactgccaagtgctggagatagtgctgcgtgaggtccatcacatgatgatgcctctctgctcccctactacaatcattcagcaccagtgcctaacctttttgaagtttctctcctgttcttgaatctagagacatttttgttgttaatccagagatataatatacctatcgaacaccacgaggtacttatattcgaatattggttcttctaaaccttttcttcttcaaatattggattgtcttgttccgaaatgaaaatcccgaaaaatcctcgcaaaagtcggtttgctcgtgaaggaatggacatggtcggctgtacctatagatttcattgtgcgattggtgataatgctaggaggcgaaaggaccatcagatcagatcagatcagatcagaaggagagtgcgacggtattgaattctgacgctgcactgctgccgtttattcggtgcagttcgatgcgtccaacagaatggtcacatcggcaacgagacgaaacagcaaatgttgcacacagtggcaacgccatgtattcacacatgcacaaatcctctagtaattactcctatcactcaagagtattaatgtattgttgctctcaactatctatttaagcaggtaaattcagtttatctgcatgtaatgtaaagtaaaagttcaggagcttacattctgtcaccagctattttgcaggaggaggtgcttctgtttctctatctgtatctgc
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| CDS seq | atgcatctccgcctcctcctcctcctcgtcggcgtcgccgccgcggcggcggacgccgacgccgacgccgacgcgctgctggcggcgaaggccgccatgtcggacccgaccggcgcgctggcgtcgtggggcggcaacgggaccaggacgaacaccaccgccgccgccgcggcacactgcgcgtgggcgggcgtgacgtgcagctcccgcggcgcggtggttggcctcgacgtgtccgggctcaacctctccggcgcgctgccggcggagctgaccgggctccgcgggctcatgcggctgtccgtcggcgccaatgccttctccggccccatcccggcgtcgttggggcggctccagttcctcacctacctcaacctctccaacaacgcgttcaatggctccttcccggcggcgctcgcgcgcctccgggggctccgggtgctcgacctctacaacaacaacctcaccagcccgctccccatggaggtggtgcagatgccgctgctccgccacctgcacctcggcggcaacttcttctccggtgagatcccgccggagtacgggcggtggggccggatgcagtatctcgccgtctccgggaacgagctctccggcaaaatcccgccggagttggggaatctgacgagcctcagggagctgtacattggttactacaacagctactccggtgggctcccaccggagttggggaacctgaccgagctcgtccgcctcgacgccgccaactgcgggctctccggcgagataccgccggagctcgggaagctgcagaacctcgacacgctgttcttgcaggtgaacagcctcgccggcggcataccgtcggagctgggttacctcaagagcctgagttctttggacctatcgaacaatgtcctcaccggcgagattccggcgagcttctccgagctcaagaacctgacgctgctcaacctgttccggaacaagctgcgtggtgacatccctgatttcgtcggcgacctgcccagcctcgaggtgctgcagctctgggagaacaacttcaccggcggcgtgccgcgccgcctcggccgcaatggccgcctccagctgctcgacctctcgtcgaacaggctcaccggcacgctgccgccggagctctgcgccggtggcaagatgcacacgctcatcgcgcttggcaacttcttgttcggcgccatcccggactcccttggtgaatgcaagtccttgagccgtgttcgtcttggggagaactacttgaacggctcaattccgaagggtctctttgagctgccgaagctgacgcaggttgagctgcaagataacctcctcacaggcaatttcccggccgtgtccggcgctgcggcgcctaatcttggggagatcagcctgtccaacaaccagctcactggtgcgctgccggcatcaattggaaacttttctggtgttcagaagctgcttcttgatcggaattcattctctggtgtcgttccacctgagattgggcgactgcagaaactctccaaggctgaccttagcagcaatgcgcttgagggaggtgtaccaccggagattgggaaatgccggttgctcacttacttggacttgagccggaacaacatctctgggaagatacctccggccatctctggaatgaggatactcaactatctcaacctgtcccggaaccatcttgatggagagatacctccatccattgcaacaatgcagagcttgaccgcggttgacttctcatataacaacttgtctgggcttgtgccaggaactggtcaattcagctacttcaatgccacatcttttgttggtaacccaggcttgtgtggaccgtacctcggaccatgccgccctggtgttgctggcaccgaccatggtggtcatggtcatggcgggctatccaatggtgtcaaactgctcattgtcctaggcttgttggcctgctccattgcatttgctgtcggggcgattctgaaggctcggtcgttgaagaaagccagtgaggcacgtgtgtggaaactcacagcattccagcgcctcgacttcacctgtgatgatgtgcttgactgcttgaaggaagaaaacgttatcggcaaaggtggtgctggaattgtgtacaagggggctatgcctaacggagatcatgttgctgtgaagcgtctcccagctatgggccgtggctcttcacatgatcatggtttttcagcagagatacagacacttgggagaattcggcaccgccatattgtgcgtttgctaggcttctgctcaaacaatgagactaatttgctggtttatgaatacatgcccaatggaagcctgggggagctgctccatggcaagaaaggcgggcaccttcactgggacacccggtacaagatcgccattgaagctgcaaaggggctctgctaccttcaccatgattgttcccctttgatacttcaccgtgatgtcaagtcaaacaatatccttcttgactcagactttgaagcacatgtggctgactttggccttgcaaagttcttgcaggacaccggtgcatctgagtgcatgtctgccattgctggctcttatggatacattgctccagaatatgcatacaccctcaaggtcgatgagaagagtgatgtctacagctttggtgttgtgcttcttgagctggttactggacggaagcctgttggggagtttggagatggcgttgacatcgtccaatgggtgaggatgatgaccgactcaaacaaggaacaagtgatgaaggtcctggacccaaggctctcaacagttccacttcatgaggtcatgcacgtcttctatgtcgctttgctctgcattgaggagcagagcgtgcagcgtccaacaatgcgggaggttgtacagatcctcagcgagcttccaaagctagctcccaggcaaggagaagtgctttcacacgctgtcgatggttttgcatccaatcctccagctccagttccttctgggtctgcagaagcactaactggtgatgcgaaagatcaacagcagcagcaaacaaattcagagtcaactacacctcctgatctcatcagcatatga
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| Protein seq | MHLRLLLLLVGVAAAAADADADADALLAAKAAMSDPTGALASWGGNGTRTNTTAAAAAHCAWAGVTCSSRGAVVGLDVSGLNLSGALPAELTGLRGLMRLSVGANAFSGPIPASLGRLQFLTYLNLSNNAFNGSFPAALARLRGLRVLDLYNNNLTSPLPMEVVQMPLLRHLHLGGNFFSGEIPPEYGRWGRMQYLAVSGNELSGKIPPELGNLTSLRELYIGYYNSYSGGLPPELGNLTELVRLDAANCGLSGEIPPELGKLQNLDTLFLQVNSLAGGIPSELGYLKSLSSLDLSNNVLTGEIPASFSELKNLTLLNLFRNKLRGDIPDFVGDLPSLEVLQLWENNFTGGVPRRLGRNGRLQLLDLSSNRLTGTLPPELCAGGKMHTLIALGNFLFGAIPDSLGECKSLSRVRLGENYLNGSIPKGLFELPKLTQVELQDNLLTGNFPAVSGAAAPNLGEISLSNNQLTGALPASIGNFSGVQKLLLDRNSFSGVVPPEIGRLQKLSKADLSSNALEGGVPPEIGKCRLLTYLDLSRNNISGKIPPAISGMRILNYLNLSRNHLDGEIPPSIATMQSLTAVDFSYNNLSGLVPGTGQFSYFNATSFVGNPGLCGPYLGPCRPGVAGTDHGGHGHGGLSNGVKLLIVLGLLACSIAFAVGAILKARSLKKASEARVWKLTAFQRLDFTCDDVLDCLKEENVIGKGGAGIVYKGAMPNGDHVAVKRLPAMGRGSSHDHGFSAEIQTLGRIRHRHIVRLLGFCSNNETNLLVYEYMPNGSLGELLHGKKGGHLHWDTRYKIAIEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLQDTGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRMMTDSNKEQVMKVLDPRLSTVPLHEVMHVFYVALLCIEEQSVQRPTMREVVQILSELPKLAPRQGEVLSHAVDGFASNPPAPVPSGSAEALTGDAKDQQQQQTNSESTTPPDLISI |
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| Function | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [UniProtKB/Swiss-Prot:O49545] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0036100 | OsKeNa_03g0036100.02 | Chr03 | 33215389 | 33219335 | + | NAM | ||
| CDS seq | atgcatctccgcctcctcctcctcctcgtcggcgtcgccgccgcggcggcggacgccgacgccgacgccgacgcgctgctggcggcgaaggccgccatgtcggacccgaccggcgcgctggcgtcgtggggcggcaacgggaccaggacgaacaccaccgccgccgccgcggcacactgcgcgtgggcgggcgtgacgtgcagctcccgcggcgcggtggttggcctcgacgtgtccgggctcaacctctccggcgcgctgccggcggagctgaccgggctccgcgggctcatgcggctgtccgtcggcgccaatgccttctccggccccatcccggcgtcgttggggcggctccagttcctcacctacctcaacctctccaacaacgcgttcaatggctccttcccggcggcgctcgcgcgcctccgggggctccgggtgctcgacctctacaacaacaacctcaccagcccgctccccatggaggtggtgcagatgccgctgctccgccacctgcacctcggcggcaacttcttctccggtgagatcccgccggagtacgggcggtggggccggatgcagtatctcgccgtctccgggaacgagctctccggcaaaatcccgccggagttggggaatctgacgagcctcagggagctgtacattggttactacaacagctactccggtgggctcccaccggagttggggaacctgaccgagctcgtccgcctcgacgccgccaactgcgggctctccggcgagataccgccggagctcgggaagctgcagaacctcgacacgctgttcttgcaggtgaacagcctcgccggcggcataccgtcggagctgggttacctcaagagcctgagttctttggacctatcgaacaatgtcctcaccggcgagattccggcgagcttctccgagctcaagaacctgacgctgctcaacctgttccggaacaagctgcgtggtgacatccctgatttcgtcggcgacctgcccagcctcgaggtgctgcagctctgggagaacaacttcaccggcggcgtgccgcgccgcctcggccgcaatggccgcctccagctgctcgacctctcgtcgaacaggctcaccggcacgctgccgccggagctctgcgccggtggcaagatgcacacgctcatcgcgcttggcaacttcttgttcggcgccatcccggactcccttggtgaatgcaagtccttgagccgtgttcgtcttggggagaactacttgaacggctcaattccgaagggtctctttgagctgccgaagctgacgcaggttgagctgcaagataacctcctcacaggcaatttcccggccgtgtccggcgctgcggcgcctaatcttggggagatcagcctgtccaacaaccagctcactggtgcgctgccggcatcaattggaaacttttctggtgttcagaagctgcttcttgatcggaattcattctctggtgtcgttccacctgagattgggcgactgcagaaactctccaaggctgaccttagcagcaatgcgcttgagggaggtgtaccaccggagattgggaaatgccggttgctcacttacttggacttgagccggaacaacatctctgggaagatacctccggccatctctggaatgaggatactcaactatctcaacctgtcccggaaccatcttgatggagagatacctccatccattgcaacaatgcagagcttgaccgcggttgacttctcatataacaacttgtctgggcttgtgccaggaactggtcaattcagctacttcaatgccacatcttttgttggtaacccaggcttgtgtggaccgtacctcggaccatgccgccctggtgttgctggcaccgaccatggtggtcatggtcatggcgggctatccaatggtgtcaaactgctcattgtcctaggcttgttggcctgctccattgcatttgctgtcggggcgattctgaaggctcggtcgttgaagaaagccagtgaggcacgtgtgtggaaactcacagcattccagcgcctcgacttcacctgtgatgatgtgcttgactgcttgaaggaagaaaacgttatcggcaaaggtggtgctggaattgtgtacaagggggctatgcctaacggagatcatgttgctgtgaagcgtctcccagctatgggccgtggctcttcacatgatcatggtttttcagcagagatacagacacttgggagaattcggcaccgccatattgtgcgtttgctaggcttctgctcaaacaatgagactaatttgctggtttatgaatacatgcccaatggaagcctgggggagctgctccatggcaagaaaggcgggcaccttcactgggacacccggtacaagatcgccattgaagctgcaaaggggctctgctaccttcaccatgattgttcccctttgatacttcaccgtgatgtcaagtcaaacaatatccttcttgactcagactttgaagcacatgtggctgactttggccttgcaaagttcttgcaggacaccggtgcatctgagtgcatgtctgccattgctggctcttatggatacattgctccagaatatgcatacaccctcaaggtcgatgagaagagtgatgtctacagctttggtgttgtgcttcttgagctggttactggacggaagcctgttggggagtttggagatggcgttgacatcgtccaatgggtgaggatgatgaccgactcaaacaaggaacaagtgatgaaggtcctggacccaaggctctcaacagttccacttcatgaggtcatgcacgtcttctatgtcgctttgctctgcattgaggagcagagcgtgcagcgtccaacaatgcgggaggttgtacagatcctcagcgagcttccaaagctagctcccaggcaaggagaagtgctttcacacgctgtcgatggttttgcatccaatcctccagctccagttccttctgggtctgcagaagcactaactggtgatgcgaaagatcaacagcagcagcaaacaaattcagagtcaactacacctcctgatctcatcagcatatga
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| Protein seq | MHLRLLLLLVGVAAAAADADADADALLAAKAAMSDPTGALASWGGNGTRTNTTAAAAAHCAWAGVTCSSRGAVVGLDVSGLNLSGALPAELTGLRGLMRLSVGANAFSGPIPASLGRLQFLTYLNLSNNAFNGSFPAALARLRGLRVLDLYNNNLTSPLPMEVVQMPLLRHLHLGGNFFSGEIPPEYGRWGRMQYLAVSGNELSGKIPPELGNLTSLRELYIGYYNSYSGGLPPELGNLTELVRLDAANCGLSGEIPPELGKLQNLDTLFLQVNSLAGGIPSELGYLKSLSSLDLSNNVLTGEIPASFSELKNLTLLNLFRNKLRGDIPDFVGDLPSLEVLQLWENNFTGGVPRRLGRNGRLQLLDLSSNRLTGTLPPELCAGGKMHTLIALGNFLFGAIPDSLGECKSLSRVRLGENYLNGSIPKGLFELPKLTQVELQDNLLTGNFPAVSGAAAPNLGEISLSNNQLTGALPASIGNFSGVQKLLLDRNSFSGVVPPEIGRLQKLSKADLSSNALEGGVPPEIGKCRLLTYLDLSRNNISGKIPPAISGMRILNYLNLSRNHLDGEIPPSIATMQSLTAVDFSYNNLSGLVPGTGQFSYFNATSFVGNPGLCGPYLGPCRPGVAGTDHGGHGHGGLSNGVKLLIVLGLLACSIAFAVGAILKARSLKKASEARVWKLTAFQRLDFTCDDVLDCLKEENVIGKGGAGIVYKGAMPNGDHVAVKRLPAMGRGSSHDHGFSAEIQTLGRIRHRHIVRLLGFCSNNETNLLVYEYMPNGSLGELLHGKKGGHLHWDTRYKIAIEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLQDTGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRMMTDSNKEQVMKVLDPRLSTVPLHEVMHVFYVALLCIEEQSVQRPTMREVVQILSELPKLAPRQGEVLSHAVDGFASNPPAPVPSGSAEALTGDAKDQQQQQTNSESTTPPDLISI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0036100 | OsKeNa_03g0036100.01 | Chr03 | 33215389 | 33220482 | + | NAM | ||
| CDS seq | atgcatctccgcctcctcctcctcctcgtcggcgtcgccgccgcggcggcggacgccgacgccgacgccgacgcgctgctggcggcgaaggccgccatgtcggacccgaccggcgcgctggcgtcgtggggcggcaacgggaccaggacgaacaccaccgccgccgccgcggcacactgcgcgtgggcgggcgtgacgtgcagctcccgcggcgcggtggttggcctcgacgtgtccgggctcaacctctccggcgcgctgccggcggagctgaccgggctccgcgggctcatgcggctgtccgtcggcgccaatgccttctccggccccatcccggcgtcgttggggcggctccagttcctcacctacctcaacctctccaacaacgcgttcaatggctccttcccggcggcgctcgcgcgcctccgggggctccgggtgctcgacctctacaacaacaacctcaccagcccgctccccatggaggtggtgcagatgccgctgctccgccacctgcacctcggcggcaacttcttctccggtgagatcccgccggagtacgggcggtggggccggatgcagtatctcgccgtctccgggaacgagctctccggcaaaatcccgccggagttggggaatctgacgagcctcagggagctgtacattggttactacaacagctactccggtgggctcccaccggagttggggaacctgaccgagctcgtccgcctcgacgccgccaactgcgggctctccggcgagataccgccggagctcgggaagctgcagaacctcgacacgctgttcttgcaggtgaacagcctcgccggcggcataccgtcggagctgggttacctcaagagcctgagttctttggacctatcgaacaatgtcctcaccggcgagattccggcgagcttctccgagctcaagaacctgacgctgctcaacctgttccggaacaagctgcgtggtgacatccctgatttcgtcggcgacctgcccagcctcgaggtgctgcagctctgggagaacaacttcaccggcggcgtgccgcgccgcctcggccgcaatggccgcctccagctgctcgacctctcgtcgaacaggctcaccggcacgctgccgccggagctctgcgccggtggcaagatgcacacgctcatcgcgcttggcaacttcttgttcggcgccatcccggactcccttggtgaatgcaagtccttgagccgtgttcgtcttggggagaactacttgaacggctcaattccgaagggtctctttgagctgccgaagctgacgcaggttgagctgcaagataacctcctcacaggcaatttcccggccgtgtccggcgctgcggcgcctaatcttggggagatcagcctgtccaacaaccagctcactggtgcgctgccggcatcaattggaaacttttctggtgttcagaagctgcttcttgatcggaattcattctctggtgtcgttccacctgagattgggcgactgcagaaactctccaaggctgaccttagcagcaatgcgcttgagggaggtgtaccaccggagattgggaaatgccggttgctcacttacttggacttgagccggaacaacatctctgggaagatacctccggccatctctggaatgaggatactcaactatctcaacctgtcccggaaccatcttgatggagagatacctccatccattgcaacaatgcagagcttgaccgcggttgacttctcatataacaacttgtctgggcttgtgccaggaactggtcaattcagctacttcaatgccacatcttttgttggtaacccaggcttgtgtggaccgtacctcggaccatgccgccctggtgttgctggcaccgaccatggtggtcatggtcatggcgggctatccaatggtgtcaaactgctcattgtcctaggcttgttggcctgctccattgcatttgctgtcggggcgattctgaaggctcggtcgttgaagaaagccagtgaggcacgtgtgtggaaactcacagcattccagcgcctcgacttcacctgtgatgatgtgcttgactgcttgaaggaagaaaacgttatcggcaaaggtggtgctggaattgtgtacaagggggctatgcctaacggagatcatgttgctgtgaagcgtctcccagctatgggccgtggctcttcacatgatcatggtttttcagcagagatacagacacttgggagaattcggcaccgccatattgtgcgtttgctaggcttctgctcaaacaatgagactaatttgctggtttatgaatacatgcccaatggaagcctgggggagctgctccatggcaagaaaggcgggcaccttcactgggacacccggtacaagatcgccattgaagctgcaaaggggctctgctaccttcaccatgattgttcccctttgatacttcaccgtgatgtcaagtcaaacaatatccttcttgactcagactttgaagcacatgtggctgactttggccttgcaaagttcttgcaggacaccggtgcatctgagtgcatgtctgccattgctggctcttatggatacattgctccagaatatgcatacaccctcaaggtcgatgagaagagtgatgtctacagctttggtgttgtgcttcttgagctggttactggacggaagcctgttggggagtttggagatggcgttgacatcgtccaatgggtgaggatgatgaccgactcaaacaaggaacaagtgatgaaggtcctggacccaaggctctcaacagttccacttcatgaggtcatgcacgtcttctatgtcgctttgctctgcattgaggagcagagcgtgcagcgtccaacaatgcgggaggttgtacagatcctcagcgagcttccaaagctagctcccaggcaaggagaagtgctttcacacgctgtcgatggttttgcatccaatcctccagctccagttccttctgggtctgcagaagcactaactggtgatgcgaaagatcaacagcagcagcaaacaaattcagagtcaactacacctcctgatctcatcagcatatga
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| Protein seq | MHLRLLLLLVGVAAAAADADADADALLAAKAAMSDPTGALASWGGNGTRTNTTAAAAAHCAWAGVTCSSRGAVVGLDVSGLNLSGALPAELTGLRGLMRLSVGANAFSGPIPASLGRLQFLTYLNLSNNAFNGSFPAALARLRGLRVLDLYNNNLTSPLPMEVVQMPLLRHLHLGGNFFSGEIPPEYGRWGRMQYLAVSGNELSGKIPPELGNLTSLRELYIGYYNSYSGGLPPELGNLTELVRLDAANCGLSGEIPPELGKLQNLDTLFLQVNSLAGGIPSELGYLKSLSSLDLSNNVLTGEIPASFSELKNLTLLNLFRNKLRGDIPDFVGDLPSLEVLQLWENNFTGGVPRRLGRNGRLQLLDLSSNRLTGTLPPELCAGGKMHTLIALGNFLFGAIPDSLGECKSLSRVRLGENYLNGSIPKGLFELPKLTQVELQDNLLTGNFPAVSGAAAPNLGEISLSNNQLTGALPASIGNFSGVQKLLLDRNSFSGVVPPEIGRLQKLSKADLSSNALEGGVPPEIGKCRLLTYLDLSRNNISGKIPPAISGMRILNYLNLSRNHLDGEIPPSIATMQSLTAVDFSYNNLSGLVPGTGQFSYFNATSFVGNPGLCGPYLGPCRPGVAGTDHGGHGHGGLSNGVKLLIVLGLLACSIAFAVGAILKARSLKKASEARVWKLTAFQRLDFTCDDVLDCLKEENVIGKGGAGIVYKGAMPNGDHVAVKRLPAMGRGSSHDHGFSAEIQTLGRIRHRHIVRLLGFCSNNETNLLVYEYMPNGSLGELLHGKKGGHLHWDTRYKIAIEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLQDTGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRMMTDSNKEQVMKVLDPRLSTVPLHEVMHVFYVALLCIEEQSVQRPTMREVVQILSELPKLAPRQGEVLSHAVDGFASNPPAPVPSGSAEALTGDAKDQQQQQTNSESTTPPDLISI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_03g0036100 | OsKeNa_03g0036100.03 | Chr03 | 33215389 | 33219335 | + | NAM | ||
| CDS seq | atgcatctccgcctcctcctcctcctcgtcggcgtcgccgccgcggcggcggacgccgacgccgacgccgacgcgctgctggcggcgaaggccgccatgtcggacccgaccggcgcgctggcgtcgtggggcggcaacgggaccaggacgaacaccaccgccgccgccgcggcacactgcgcgtgggcgggcgtgacgtgcagctcccgcggcgcggtggttggcctcgacgtgtccgggctcaacctctccggcgcgctgccggcggagctgaccgggctccgcgggctcatgcggctgtccgtcggcgccaatgccttctccggccccatcccggcgtcgttggggcggctccagttcctcacctacctcaacctctccaacaacgcgttcaatggctccttcccggcggcgctcgcgcgcctccgggggctccgggtgctcgacctctacaacaacaacctcaccagcccgctccccatggaggtggtgcagatgccgctgctccgccacctgcacctcggcggcaacttcttctccggtgagatcccgccggagtacgggcggtggggccggatgcagtatctcgccgtctccgggaacgagctctccggcaaaatcccgccggagttggggaatctgacgagcctcagggagctgtacattggttactacaacagctactccggtgggctcccaccggagttggggaacctgaccgagctcgtccgcctcgacgccgccaactgcgggctctccggcgagataccgccggagctcgggaagctgcagaacctcgacacgctgttcttgcaggtgaacagcctcgccggcggcataccgtcggagctgggttacctcaagagcctgagttctttggacctatcgaacaatgtcctcaccggcgagattccggcgagcttctccgagctcaagaacctgacgctgctcaacctgttccggaacaagctgcgtggtgacatccctgatttcgtcggcgacctgcccagcctcgaggtgctgcagctctgggagaacaacttcaccggcggcgtgccgcgccgcctcggccgcaatggccgcctccagctgctcgacctctcgtcgaacaggctcaccggcacgctgccgccggagctctgcgccggtggcaagatgcacacgctcatcgcgcttggcaacttcttgttcggcgccatcccggactcccttggtgaatgcaagtccttgagccgtgttcgtcttggggagaactacttgaacggctcaattccgaagggtctctttgagctgccgaagctgacgcaggttgagctgcaagataacctcctcacaggcaatttcccggccgtgtccggcgctgcggcgcctaatcttggggagatcagcctgtccaacaaccagctcactggtgcgctgccggcatcaattggaaacttttctggtgttcagaagctgcttcttgatcggaattcattctctggtgtcgttccacctgagattgggcgactgcagaaactctccaaggctgaccttagcagcaatgcgcttgagggaggtgtaccaccggagattgggaaatgccggttgctcacttacttggacttgagccggaacaacatctctgggaagatacctccggccatctctggaatgaggatactcaactatctcaacctgtcccggaaccatcttgatggagagatacctccatccattgcaacaatgcagagcttgaccgcggttgacttctcatataacaacttgtctgggcttgtgccaggaactggtcaattcagctacttcaatgccacatcttttgttggtaacccaggcttgtgtggaccgtacctcggaccatgccgccctggtgttgctggcaccgaccatggtggtcatggtcatggcgggctatccaatggtgtcaaactgctcattgtcctaggcttgttggcctgctccattgcatttgctgtcggggcgattctgaaggctcggtcgttgaagaaagccagtgaggcacgtgtgtggaaactcacagcattccagcgcctcgacttcacctgtgatgatgtgcttgactgcttgaaggaagaaaacgttatcggcaaaggtggtgctggaattgtgtacaagggggctatgcctaacggagatcatgttgctgtgaagcgtctcccagctatgggccgtggctcttcacatgatcatggtttttcagcagagatacagacacttgggagaattcggcaccgccatattgtgcgtttgctaggcttctgctcaaacaatgagactaatttgctggtttatgaatacatgcccaatggaagcctgggggagctgctccatggcaagaaaggacaccggtgcatctga
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| Protein seq | MHLRLLLLLVGVAAAAADADADADALLAAKAAMSDPTGALASWGGNGTRTNTTAAAAAHCAWAGVTCSSRGAVVGLDVSGLNLSGALPAELTGLRGLMRLSVGANAFSGPIPASLGRLQFLTYLNLSNNAFNGSFPAALARLRGLRVLDLYNNNLTSPLPMEVVQMPLLRHLHLGGNFFSGEIPPEYGRWGRMQYLAVSGNELSGKIPPELGNLTSLRELYIGYYNSYSGGLPPELGNLTELVRLDAANCGLSGEIPPELGKLQNLDTLFLQVNSLAGGIPSELGYLKSLSSLDLSNNVLTGEIPASFSELKNLTLLNLFRNKLRGDIPDFVGDLPSLEVLQLWENNFTGGVPRRLGRNGRLQLLDLSSNRLTGTLPPELCAGGKMHTLIALGNFLFGAIPDSLGECKSLSRVRLGENYLNGSIPKGLFELPKLTQVELQDNLLTGNFPAVSGAAAPNLGEISLSNNQLTGALPASIGNFSGVQKLLLDRNSFSGVVPPEIGRLQKLSKADLSSNALEGGVPPEIGKCRLLTYLDLSRNNISGKIPPAISGMRILNYLNLSRNHLDGEIPPSIATMQSLTAVDFSYNNLSGLVPGTGQFSYFNATSFVGNPGLCGPYLGPCRPGVAGTDHGGHGHGGLSNGVKLLIVLGLLACSIAFAVGAILKARSLKKASEARVWKLTAFQRLDFTCDDVLDCLKEENVIGKGGAGIVYKGAMPNGDHVAVKRLPAMGRGSSHDHGFSAEIQTLGRIRHRHIVRLLGFCSNNETNLLVYEYMPNGSLGELLHGKKGHRCI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr03 | 33215389 | 33218193 | + | OsKeNa_03g0036100.02,OsKeNa_03g0036100.01 | OsKeNa_03g0036100.02,OsKeNa_03g0036100.03,OsKeNa_03g0036100.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.344199 | 3.540817 | 3.784941 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0773700 | RBH | 1.888010 | 2.523304 | 7.656303 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g56270 | RBH | 1.112832 | 1.595920 | 1.785307 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0773700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0036430 | RBH | 0.102413 | 19.743889 | 7.869714 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0002060 | RBH | 0.035081 | 3.815719 | 3.028505 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0036180 | RBH | 0.468469 | 7.306810 | 12.225965 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0036470 | RBH | 0.207560 | 0.214272 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0035990 | RBH | 4.994367 | 13.709992 | 19.506165 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0546300 | RBH | 8.6944295 | 15.0202345 | 7.494631 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0035790 | RBH | 0.748802 | 0.509844 | 2.075932 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0547000 | RBH | 11.175968 | 5.7560165 | 38.00548 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0036270 | RBH | 0.288780 | 0.091189 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0036290 | RBH | 0.589859 | 14.074357 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0035940 | RBH | 6.457238 | 18.073820 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0036030 | RBH | 1.715818 | 0.486649 | 1.084893 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0035980 | RBH | 1.090934 | 8.124420 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G035790 | RBH | 0.430857 | 4.001471 | 5.422032 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0035570 | RBH | 5.977982 | 10.092898 | 7.156738 |
