Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0026640 | OGI:02072720 | 9/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:25991288-25991714 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctagctgagccacaatctatcctccgccatcaccttctcgttcttctccccctccttcgaactcaagaaacgctcgccggcatggcggcacgcccttcccttggcgggtagcgttgtctcacggcggcgcccttccctcggtcctgcctccccacgagctcgggtgccacgagcttgagggtagccaaatccggctgccatggcccatgagcaacggcggcggtggtccatatggctaacaactacctcttccccattcccacctaaaaaaaattgagattacgtcgcccttcccttggccctgcctccccatgtgctcgggtgtggaacggccagatcccgccaccgcgagcttgggggccgccagatccagccgccacaagtaacggcaacaacggttcacatagcgcatgtacttcttccccat
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| CDS seq | atggggaagaagtacatgcgctatgtgaaccgttgttgccgttacttgtggcggctggatctggcggcccccaagctcgcggtggcgggatctggccgttccacacccgagcacatggggaggcagggccaagggaagggcgacgtaatctcaattttttttaggtgggaatggggaagagccggatttggctaccctcaagctcgtggcacccgagctcgtggggaggcaggaccgagggaagggcgccgccgtgagacaacgctacccgccaagggaagggcgtgccgccatgccggcgagcgtttcttgagttcgaaggagggggagaagaacgagaaggtgatggcggaggatagattgtggctcagctag |
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| Protein seq | MGKKYMRYVNRCCRYLWRLDLAAPKLAVAGSGRSTPEHMGRQGQGKGDVISIFFRWEWGRAGFGYPQARGTRARGEAGPREGRRRETTLPAKGRACRHAGERFLSSKEGEKNEKVMAEDRLWLS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0026640 | OsKeNa_02g0026640.01 | Chr02 | 25991288 | 25991714 | - | NAM | ||
| CDS seq | atggggaagaagtacatgcgctatgtgaaccgttgttgccgttacttgtggcggctggatctggcggcccccaagctcgcggtggcgggatctggccgttccacacccgagcacatggggaggcagggccaagggaagggcgacgtaatctcaattttttttaggtgggaatggggaagagccggatttggctaccctcaagctcgtggcacccgagctcgtggggaggcaggaccgagggaagggcgccgccgtgagacaacgctacccgccaagggaagggcgtgccgccatgccggcgagcgtttcttgagttcgaaggagggggagaagaacgagaaggtgatggcggaggatagattgtggctcagctag
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| Protein seq | MGKKYMRYVNRCCRYLWRLDLAAPKLAVAGSGRSTPEHMGRQGQGKGDVISIFFRWEWGRAGFGYPQARGTRARGEAGPREGRRRETTLPAKGRACRHAGERFLSSKEGEKNEKVMAEDRLWLS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42610 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0026530 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0026510 | RBH | 0.986291 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0026080 | RBH | 0.323709 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0417500 | SBH | 6.7509185 | 0.0714075 | 0.0186815 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0026000 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0444900 | RBH | 5.359338 | 12.4520375 | 8.7034665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0026350 | RBH | 0.314569 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0026020 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0026400 | RBH | 8.999664 | 12.359344 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0026210 | SBH | 1.749138 | 0.0 | 0.104665 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G026520 | SBH | 0.498169 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
