Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0026460 | OGI:02072380 | 15/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:25839025-25842647 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gcccgtataccaatcacccttgagctcccactcaccttcagttccattggcgctgaaaaacataaacaggcatgaatgctctagtgatcttgctatgctccacgttgcttttgtattcccctgcggcggtatgcacggtagggagcagcagcagcagcacaaacgccaccgacaagcaggcagccgcgctgctctccttcaggtccatggtgtccgacccatccggcgcgctcacctggtggaacgcctccaaccacccgtgcaggtggcgtggcgtcgcgtgcggccgcggccggcacgcgggcagcgtcgtcgcgctaagcctcggctcctcgtcgttgtccgggctcatctcgccgttcttgggtaacctctcgttcctgcgtgtgctagaccttggggtgaaccagctggttggccagattcctcccgagctggggcgtctcggtaggctccgagagcttaacctttctggcaactcgctagaagggggcatcccaccggcgttggcgataggatgtagcgagctcgagagccttagcctggactccaaccacctccgtggtgagatcccgggtgagatcgccgcgttgaggaatctagcgtacttgaatcttcgtgcaaataatctgtcgggagagatcccgccatccctgggtaacttgtcatcactttacttcttgaatctagggttcaacatgctatttggtgagattccagcttccttgggcaatctttcccagctcaatgctcttggtattcaacataaccaattatctggtggcataccttcttctcttggtcacttgaacaaccttaccagtcttctcctacaagctaacggtctgatagggtccattcctcctaatatttgtaacatatcattcctaaaacatttttctgtagaaaacaatgagctcagtgggatgctaccaccgaacgtgttcaacacacttcctatgctcgagactttcgatgcgggggagaatatgtttcatggccatattccatcatcactggttaatgcctccaaactctctagatttcagatcgcgaaaaaccacttcagtggtgtaattcctccagagttaggagggttacagggtctcaagtggtttattctcactgaaaatgatcttgaagccaaagaatctaacgactggaagtttatgaaagcattaacaaattgctcccaattagaagttttggaattggaagccaataagtttagtggaactcttccatccgtaatttccaacttatccgcatcactaaaaatcctcacatgcctagagaaattggcaaattaatcaatttaggtgcacttgtcgcacataacaattttctgactggaagtccaccgtcatcattaggtatgcttcaaaacctaagaattttgtggctagataacaattactttagtgggccattccctcgtgttatatgcaatttaactcatatggactctttagaccttggaaggaataattttagtggtagcatcccaataacagtgggaaacatggtttcactgtcgagtctacgtttctcctttaataactttataggtaccatcccaactagtttattcaacatcacaacactctcaatatatttggatatctcctacaatcacttagacgggtcaataccacctgaagttgggaatctaccgaatcttgtataccttgatgcccggtataatcaattatcaggggaaattcctattactttcgaaaaatgccagcttctccagattttgtatctgcaaaacaattcatttattggtaatatcccatcatcctttagtgagatgaagggtttagaaattctcgacctctctagtaacaatttttcaggccaaataccaaagttctttggacacttcctcacactctatgatttaaacctctcttacaataactttgatggtgaagtgccagtgtttggtgtttttgcaaatgctactggcatttcggtccaagggaacaacaagctttgtgggggcattccagatcttcacttgcctacatgttctcttaagatttccaagagaaggcatagagttccagggttggcgattgttgttccccttgttgctacaacaatatgtatcctttcattgctccttttcttccatgcttggtataagaaaagattaacaaaaagcccttcaacaatgtccatgcgagcccatcaacttgtctcctaccagcagttggtacatgcaacagatggcttctcgacgaccaatttgttgggtactgggagctatggatcagtctatagaggtaaattgttcgatgaaactggtgagaatgaaaatcttatcgctgtaaaagtattgaaacttcagacacctggggctcttaagagtttcacggcggaatgtgaagcgatgaagaacttaagacaccggaaccttgttaagatagttacagcatgctcaagcatggacttcaatggaaacgacttcaaagcaattgtgttcgacttcatgcccaatggttgcctagaagagtggctccatcctcagatagataaccaattggaagagaggcacttgaatcttgtccacagagtaggcatactctttgatgtggcttgtgcattggattatcttcatttccatggcactacacctgttgtgcactgcgatcttaaaccaagtaatgtgcttcttgatgctgatatggtagcacatgttggagattttgggctagccaagatactgtcttctcaaccctcaacgagctcgatgggatttagagggacaattggttatgctccacctggttagtttatcattctttttatttgcatctatcgatttatttaacacaagaaatttacttgaaaacattacgacctttcaatcgtcaaatctctttcaccatagacatagcattatcatttacccagtttacttactctcatcatcactgttcaattcaaacagaatatggtgctggaaatatggtttcaactcacggagacatctatagctatggaattcttgttcttgaaatgattactggaaggcggcctacagataacacatgtgagcaaggatttagccttcgcaagtgcgttgagatggccctgaataatcgagcgatggacattctcgatgtagagctggtaacagagcttgaaaacgcgccgcctgcaacatccatggatggtccgtcagaaagggtgaactccctgatttcgctacttaaactcgggctgctctgctctggggaaatgccattgagtagaatgtcaaccaaagatatcatcaaggagctgcttgtaatcaaaagggcactcgcttaagaaagcttttttttaagaggaaggtcacaacttaagaaggcttttgagaagcaaaacatgccaaattatgtgctcttttttattattcctgatgtatgtgcgattctctttaatttctaagacaaactcatgaatgcatgggtttcaaagaacaaaagcattgtactggtgtaatatgcgatatagattttctggatcacggtgaaaagatgttgccgctgatactccctctttttcctgattgaatatttgtaaagctacagtacctgtttgagtaaacaagctaaacttcacatgtatcg
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| CDS seq | atgaatgctctagtgatcttgctatgctccacgttgcttttgtattcccctgcggcggtatgcacggtagggagcagcagcagcagcacaaacgccaccgacaagcaggcagccgcgctgctctccttcaggtccatggtgtccgacccatccggcgcgctcacctggtggaacgcctccaaccacccgtgcaggtggcgtggcgtcgcgtgcggccgcggccggcacgcgggcagcgtcgtcgcgctaagcctcggctcctcgtcgttgtccgggctcatctcgccgttcttgggtaacctctcgttcctgcgtgtgctagaccttggggtgaaccagctggttggccagattcctcccgagctggggcgtctcggtaggctccgagagcttaacctttctggcaactcgctagaagggggcatcccaccggcgttggcgataggatgtagcgagctcgagagccttagcctggactccaaccacctccgtggtgagatcccgggtgagatcgccgcgttgaggaatctagcgtacttgaatcttcgtgcaaataatctgtcgggagagatcccgccatccctgggtaacttgtcatcactttacttcttgaatctagggttcaacatgctatttggtgagattccagcttccttgggcaatctttcccagctcaatgctcttggtattcaacataaccaattatctggtggcataccttcttctcttggtcacttgaacaaccttaccagtcttctcctacaagctaacggtctgatagggtccattcctcctaatatttgtaacatatcattcctaaaacatttttctgtagaaaacaatgagctcagtgggatgctaccaccgaacgtgttcaacacacttcctatgctcgagactttcgatgcgggggagaatatgtttcatggccatattccatcatcactggttaatgcctccaaactctctagatttcagatcgcgaaaaaccacttcagtggtgtaattcctccagagttaggagggttacagggtaccatcccaactagtttattcaacatcacaacactctcaatatatttggatatctcctacaatcacttagacgggtcaataccacctgaagttgggaatctaccgaatcttgtataccttgatgcccggtataatcaattatcaggggaaattcctattactttcgaaaaatgccagcttctccagattttgtatctgcaaaacaattcatttattggtaatatcccatcatcctttagtgagatgaagggtttagaaattctcgacctctctagtaacaatttttcaggccaaataccaaagttctttggacacttcctcacactctatgatttaaacctctcttacaataactttgatggtgaagtgccagtgtttggtgtttttgcaaatgctactggcatttcggtccaagggaacaacaagctttgtgggggcattccagatcttcacttgcctacatgttctcttaagatttccaagagaaggcatagagttccagggttggcgattgttgttccccttgttgctacaacaatatgtatcctttcattgctccttttcttccatgcttggtataagaaaagattaacaaaaagcccttcaacaatgtccatgcgagcccatcaacttgtctcctaccagcagttggtacatgcaacagatggcttctcgacgaccaatttgttgggtactgggagctatggatcagtctatagaggtaaattgttcgatgaaactggtgagaatgaaaatcttatcgctgtaaaagtattgaaacttcagacacctggggctcttaagagtttcacggcggaatgtgaagcgatgaagaacttaagacaccggaaccttgttaagatagttacagcatgctcaagcatggacttcaatggaaacgacttcaaagcaattgtgttcgacttcatgcccaatggttgcctagaagagtggctccatcctcagatagataaccaattggaagagaggcacttgaatcttgtccacagagtaggcatactctttgatgtggcttgtgcattggattatcttcatttccatggcactacacctgttgtgcactgcgatcttaaaccaagtaatgtgcttcttgatgctgatatggtagcacatgttggagattttgggctagccaagatactgtcttctcaaccctcaacgagctcgatgggatttagagggacaattggttatgctccacctgaatatggtgctggaaatatggtttcaactcacggagacatctatagctatggaattcttgttcttgaaatgattactggaaggcggcctacagataacacatgtgagcaaggatttagccttcgcaagtgcgttgagatggccctgaataatcgagcgatggacattctcgatgtagagctggtaacagagcttgaaaacgcgccgcctgcaacatccatggatggtccgtcagaaagggtgaactccctgatttcgctacttaaactcgggctgctctgctctggggaaatgccattgagtagaatgtcaaccaaagatatcatcaaggagctgcttgtaatcaaaagggcactcgcttaa
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| Protein seq | MNALVILLCSTLLLYSPAAVCTVGSSSSSTNATDKQAAALLSFRSMVSDPSGALTWWNASNHPCRWRGVACGRGRHAGSVVALSLGSSSLSGLISPFLGNLSFLRVLDLGVNQLVGQIPPELGRLGRLRELNLSGNSLEGGIPPALAIGCSELESLSLDSNHLRGEIPGEIAALRNLAYLNLRANNLSGEIPPSLGNLSSLYFLNLGFNMLFGEIPASLGNLSQLNALGIQHNQLSGGIPSSLGHLNNLTSLLLQANGLIGSIPPNICNISFLKHFSVENNELSGMLPPNVFNTLPMLETFDAGENMFHGHIPSSLVNASKLSRFQIAKNHFSGVIPPELGGLQGTIPTSLFNITTLSIYLDISYNHLDGSIPPEVGNLPNLVYLDARYNQLSGEIPITFEKCQLLQILYLQNNSFIGNIPSSFSEMKGLEILDLSSNNFSGQIPKFFGHFLTLYDLNLSYNNFDGEVPVFGVFANATGISVQGNNKLCGGIPDLHLPTCSLKISKRRHRVPGLAIVVPLVATTICILSLLLFFHAWYKKRLTKSPSTMSMRAHQLVSYQQLVHATDGFSTTNLLGTGSYGSVYRGKLFDETGENENLIAVKVLKLQTPGALKSFTAECEAMKNLRHRNLVKIVTACSSMDFNGNDFKAIVFDFMPNGCLEEWLHPQIDNQLEERHLNLVHRVGILFDVACALDYLHFHGTTPVVHCDLKPSNVLLDADMVAHVGDFGLAKILSSQPSTSSMGFRGTIGYAPPEYGAGNMVSTHGDIYSYGILVLEMITGRRPTDNTCEQGFSLRKCVEMALNNRAMDILDVELVTELENAPPATSMDGPSERVNSLISLLKLGLLCSGEMPLSRMSTKDIIKELLVIKRALA |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q2R2D5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0026460 | OsKeNa_02g0026460.01 | Chr02 | 25839025 | 25842647 | + | NAM | ||
| CDS seq | atgaatgctctagtgatcttgctatgctccacgttgcttttgtattcccctgcggcggtatgcacggtagggagcagcagcagcagcacaaacgccaccgacaagcaggcagccgcgctgctctccttcaggtccatggtgtccgacccatccggcgcgctcacctggtggaacgcctccaaccacccgtgcaggtggcgtggcgtcgcgtgcggccgcggccggcacgcgggcagcgtcgtcgcgctaagcctcggctcctcgtcgttgtccgggctcatctcgccgttcttgggtaacctctcgttcctgcgtgtgctagaccttggggtgaaccagctggttggccagattcctcccgagctggggcgtctcggtaggctccgagagcttaacctttctggcaactcgctagaagggggcatcccaccggcgttggcgataggatgtagcgagctcgagagccttagcctggactccaaccacctccgtggtgagatcccgggtgagatcgccgcgttgaggaatctagcgtacttgaatcttcgtgcaaataatctgtcgggagagatcccgccatccctgggtaacttgtcatcactttacttcttgaatctagggttcaacatgctatttggtgagattccagcttccttgggcaatctttcccagctcaatgctcttggtattcaacataaccaattatctggtggcataccttcttctcttggtcacttgaacaaccttaccagtcttctcctacaagctaacggtctgatagggtccattcctcctaatatttgtaacatatcattcctaaaacatttttctgtagaaaacaatgagctcagtgggatgctaccaccgaacgtgttcaacacacttcctatgctcgagactttcgatgcgggggagaatatgtttcatggccatattccatcatcactggttaatgcctccaaactctctagatttcagatcgcgaaaaaccacttcagtggtgtaattcctccagagttaggagggttacagggtaccatcccaactagtttattcaacatcacaacactctcaatatatttggatatctcctacaatcacttagacgggtcaataccacctgaagttgggaatctaccgaatcttgtataccttgatgcccggtataatcaattatcaggggaaattcctattactttcgaaaaatgccagcttctccagattttgtatctgcaaaacaattcatttattggtaatatcccatcatcctttagtgagatgaagggtttagaaattctcgacctctctagtaacaatttttcaggccaaataccaaagttctttggacacttcctcacactctatgatttaaacctctcttacaataactttgatggtgaagtgccagtgtttggtgtttttgcaaatgctactggcatttcggtccaagggaacaacaagctttgtgggggcattccagatcttcacttgcctacatgttctcttaagatttccaagagaaggcatagagttccagggttggcgattgttgttccccttgttgctacaacaatatgtatcctttcattgctccttttcttccatgcttggtataagaaaagattaacaaaaagcccttcaacaatgtccatgcgagcccatcaacttgtctcctaccagcagttggtacatgcaacagatggcttctcgacgaccaatttgttgggtactgggagctatggatcagtctatagaggtaaattgttcgatgaaactggtgagaatgaaaatcttatcgctgtaaaagtattgaaacttcagacacctggggctcttaagagtttcacggcggaatgtgaagcgatgaagaacttaagacaccggaaccttgttaagatagttacagcatgctcaagcatggacttcaatggaaacgacttcaaagcaattgtgttcgacttcatgcccaatggttgcctagaagagtggctccatcctcagatagataaccaattggaagagaggcacttgaatcttgtccacagagtaggcatactctttgatgtggcttgtgcattggattatcttcatttccatggcactacacctgttgtgcactgcgatcttaaaccaagtaatgtgcttcttgatgctgatatggtagcacatgttggagattttgggctagccaagatactgtcttctcaaccctcaacgagctcgatgggatttagagggacaattggttatgctccacctgaatatggtgctggaaatatggtttcaactcacggagacatctatagctatggaattcttgttcttgaaatgattactggaaggcggcctacagataacacatgtgagcaaggatttagccttcgcaagtgcgttgagatggccctgaataatcgagcgatggacattctcgatgtagagctggtaacagagcttgaaaacgcgccgcctgcaacatccatggatggtccgtcagaaagggtgaactccctgatttcgctacttaaactcgggctgctctgctctggggaaatgccattgagtagaatgtcaaccaaagatatcatcaaggagctgcttgtaatcaaaagggcactcgcttaa
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| Protein seq | MNALVILLCSTLLLYSPAAVCTVGSSSSSTNATDKQAAALLSFRSMVSDPSGALTWWNASNHPCRWRGVACGRGRHAGSVVALSLGSSSLSGLISPFLGNLSFLRVLDLGVNQLVGQIPPELGRLGRLRELNLSGNSLEGGIPPALAIGCSELESLSLDSNHLRGEIPGEIAALRNLAYLNLRANNLSGEIPPSLGNLSSLYFLNLGFNMLFGEIPASLGNLSQLNALGIQHNQLSGGIPSSLGHLNNLTSLLLQANGLIGSIPPNICNISFLKHFSVENNELSGMLPPNVFNTLPMLETFDAGENMFHGHIPSSLVNASKLSRFQIAKNHFSGVIPPELGGLQGTIPTSLFNITTLSIYLDISYNHLDGSIPPEVGNLPNLVYLDARYNQLSGEIPITFEKCQLLQILYLQNNSFIGNIPSSFSEMKGLEILDLSSNNFSGQIPKFFGHFLTLYDLNLSYNNFDGEVPVFGVFANATGISVQGNNKLCGGIPDLHLPTCSLKISKRRHRVPGLAIVVPLVATTICILSLLLFFHAWYKKRLTKSPSTMSMRAHQLVSYQQLVHATDGFSTTNLLGTGSYGSVYRGKLFDETGENENLIAVKVLKLQTPGALKSFTAECEAMKNLRHRNLVKIVTACSSMDFNGNDFKAIVFDFMPNGCLEEWLHPQIDNQLEERHLNLVHRVGILFDVACALDYLHFHGTTPVVHCDLKPSNVLLDADMVAHVGDFGLAKILSSQPSTSSMGFRGTIGYAPPEYGAGNMVSTHGDIYSYGILVLEMITGRRPTDNTCEQGFSLRKCVEMALNNRAMDILDVELVTELENAPPATSMDGPSERVNSLISLLKLGLLCSGEMPLSRMSTKDIIKELLVIKRALA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.127401 | 0.349557 | 1.909804 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0635600 | RBH | 0.644365 | 0.616778 | 1.988041 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42370 | RBH | 0.435753 | 0.414834 | 0.511760 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0635600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0026340 | RBH | 0.160648 | 2.597901 | 3.436844 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0021640 | SBH | 0.151433 | 4.625735 | 0.626385 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0026310 | RBH | 0.482582 | 2.556802 | 6.260698 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0025880 | RBH | 0.061118 | 0.033852 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0025990 | RBH | 1.501055 | 3.961113 | 10.076241 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0414600 | RBH | 1.9962675 | 0.875526 | 4.2756155 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0025810 | RBH | 0.055403 | 0.000000 | 0.801797 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0442900 | RBH | 2.0651085 | 0.8342395 | 6.221869 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0026160 | RBH | 0.118790 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0025840 | RBH | 0.417951 | 1.732746 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0026200 | RBH | 0.535453 | 6.893193 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0026030 | RBH | 0.264129 | 0.000000 | 0.691454 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0025680 | RBH | 0.125457 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G026320 | RBH | 0.044814 | 0.765208 | 0.886877 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0026070 | RBH | 0.407520 | 0.000000 | 2.625888 |
