Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_02g0005860 | OGI:02012550 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr02:4045258-4048587 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcacatgcaaaagcatagccacccactgccttctccccccaccccgcgtcgcgccacggtcaccgtcgccggccaccgccccgCcccgccgagccgagccgaagcgccatggcgcggcctcggccgcccggcctcatcgccgtcgctgccgccgccgccctcgtcgcctggtgtctttgcgggcctgcctccgccgccgccgccgccggtggcgaggcgggcggcggcgcggggcccgagggcgacgtgctgatcgcgttccgggagacgctgcgggggccggacggcgcgccgccggggccgctgcgagcgtggggcacgccggcggtgccgtgccgcggcaaggcgtcgcagtggttcggcgtgtcgtgccacgggaacggcagcgtgcaggggctgcagctggagcggctgggcttgtcgggcgcggcgcccgacctgggcctgctcgccgcgctcccGGggctccgcgtgctcagcctcgccaacaacgccatcgccggcgcgttccccaacgtgtcggcgctcgccatgctcaagatgctctacctctcccgcaaccgcttctccggcgtcgtccccgacggcaccttccacaccatgcgcggcctccgcaagctccacctctcctccaacgagctctccggCccgatccccagctccatcacctcgccgcggctgctcgagctgtcgctcgcgcacaaccagttcaacgggccattgccggacttctcccagccggagctccgctacgtcgacgtctccagcaacaacctctccggccctatccccgaaggcctcagccgcttcaacgccagcatgttctcaggtacgcagatctcgatcgatcacgacgtcttcttcttcctcctccgattcacgccattgatcgattcttgatcttggatttggatttgggtttgatcaggtaacgagtatctctgcggcaagccgctcgacacgccctgcgacaagctcgcctcgccgtcgaacatgtcgacgttcatgaccatcgccgttgtgctcatcgtcgtcggcgtgatcctcgccgcggcggggatcgcgacgggggtcatcggccgcaggaggcggaagcggcggcggcgacgccccgggcccggcgagcccggcggcgaccaGacgccctccaacccgaagctccacaccgcgccggccgtgaacatcaaccgtggatccgccaccgccgctgcctccaccgccgccgcagctggaacgtcggcctctggcggcggcggcggcgcggcggcgaagcgaggggggagacgggacgagcacgggcggctggtgttcgtccaggagagccggaagcggttcgagatcgaggacctgctgcgtgcgtcggcggaggtgctcggcagcggcaacttcgggtcgtcgtacaaggcgacgctccaggagcgccccgccgtggtggtgaagcggttcaaggacatgaacggcgtcgggcgcgaggacttctccgaacacatgcgccgcctcggccgcctctcccaccccaacctcctccccgtcgtcgcctacctctacaagaaagacgagaagctcctcatcaccgactacatcaccaatggcagcctcgcccatttcctccacggtaaccaaccattcattcctcaatctcgcaacaccatttcgtcttaccgacaacgttcaattccaagaaatatcatcgataagtgcaagttacataaaatactactctctccgtttcaggttacaagacgttttgactttggtcaaaatcaaactattttaagtttgactaagtttatagacaaatatagtataatatttataatattaaattagtgtcatcaaatcaataattgaatatattttcataataaatttgttttgggttaaaaatgctactacttttttctataaacttaatcaaacttaaagcacatcttgtaacctgaaatggagagtatcgtacatgcgactttgttccagaaaaatcatcgttgtaagggttttgttcatcccgcaccgttgaatgcaccgtttatcataactagtgataatagtatttctggaacaaaatagcttgtacgatcgatagcatttcttataattgaacgcttgtcttggatttttttctcttttttggcataatgaattgaggtgagatttttgtaacagggaatcggggatcggagttggattgggggaagaggctgaggataatcagggggacggcgagggggttggggcacctgtacgacgagctgccgatgctgacggtgccgcacggccacctcaagtcgtcgaacgtgctgctcgacggcgacatggaggcggtgctgtcggactacgcgctggtgccggtggtcacggcgagcgcggcggcgcaggtgatggtggcgtacaaggcgccggagtgcgtcgcggcggcggcggccggcaagccgtcgaagaagagcgacgtgtggagcctcgggatcctcatcctcgaggtgctcaccggcaagttcccggcgaactacctccgccaGGggGGCGGCAGGACAACGCCGACCTCGCCGGCTGGGTCAGCTCCGTCGTCAGCGAGGAGCGCACCGGCGAGGTGTTCGACAAGGACATGGCCGCCGCCGGCGCCGGCGCCGAGGACGACATGCTCAAGCTGCTCCACGTCGGCCTCGGCTGCTGCGACGCCGACGTCGACCAGAGGTGGGAGCTCAAGACGGCGATCGCGCGCATCGAGGAGATCAGGGTTCCGGACCCCACCCCCACCCCCGCCGCCGCCGCTGACGCCGCCGAGCCCTCGCCGTCGACGACGACGACGACGAACTCCGGCGAGACCCGGTCGTAACGTAACCCGATACACACGCGTATACGAAATCAAGCAGCTCCAATGATCGCCTCTTGGTCAACGGTCAGCGCCTTGCATGCGTGCCACGTGGCATGGTACGGTGAGCTATTGCATGGGCGAAACTGATTGGTGGTTAATGAGCTAAGCATGAAGATTATAATTTAACCCAGCTGATGCATGCATGGAAAATTCGAGCGTGTGTAGAATTGATTTTGGCAGAAATTGGTTTAGCTTAATTTAATGAAGGGATATATATGGCTAGCTAAGTTAGTAATTTTTTATTTTGCTGTACTGATTAGAGTGTAAGAGTTAGGAAATTAAGATGTTGGGATATTTTTTCTTTTCCTTTTTTTCTCttcttttcatatatacatacaaatttgttgttacactggaatttgttgctagctcgtagtttaagctccttgctagcttgtagtttaagctccttgtataaactttcgaagtataaaattctcagatttttgccat
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| CDS seq | atggcgcggcctcggccgcccggcctcatcgccgtcgctgccgccgccgccctcgtcgcctggtgtctttgcgggcctgcctccgccgccgccgccgccggtggcgaggcgggcggcggcgcggggcccgagggcgacgtgctgatcgcgttccgggagacgctgcgggggccggacggcgcgccgccggggccgctgcgagcgtggggcacgccggcggtgccgtgccgcggcaaggcgtcgcagtggttcggcgtgtcgtgccacgggaacggcagcgtgcaggggctgcagctggagcggctgggcttgtcgggcgcggcgcccgacctgggcctgctcgccgcgctcccGGggctccgcgtgctcagcctcgccaacaacgccatcgccggcgcgttccccaacgtgtcggcgctcgccatgctcaagatgctctacctctcccgcaaccgcttctccggcgtcgtccccgacggcaccttccacaccatgcgcggcctccgcaagctccacctctcctccaacgagctctccggCccgatccccagctccatcacctcgccgcggctgctcgagctgtcgctcgcgcacaaccagttcaacgggccattgccggacttctcccagccggagctccgctacgtcgacgtctccagcaacaacctctccggccctatccccgaaggcctcagccgcttcaacgccagcatgttctcaggtaacgagtatctctgcggcaagccgctcgacacgccctgcgacaagctcgcctcgccgtcgaacatgtcgacgttcatgaccatcgccgttgtgctcatcgtcgtcggcgtgatcctcgccgcggcggggatcgcgacgggggtcatcggccgcaggaggcggaagcggcggcggcgacgccccgggcccggcgagcccggcggcgaccaGacgccctccaacccgaagctccacaccgcgccggccgtgaacatcaaccgtggatccgccaccgccgctgcctccaccgccgccgcagctggaacgtcggcctctggcggcggcggcggcgcggcggcgaagcgaggggggagacgggacgagcacgggcggctggtgttcgtccaggagagccggaagcggttcgagatcgaggacctgctgcgtgcgtcggcggaggtgctcggcagcggcaacttcgggtcgtcgtacaaggcgacgctccaggagcgccccgccgtggtggtgaagcggttcaaggacatgaacggcgtcgggcgcgaggacttctccgaacacatgcgccgcctcggccgcctctcccaccccaacctcctccccaggctgaggataatcagggggacggcgagggggttggggcacctgtacgacgagctgccgatgctgacggtgccgcacggccacctcaagtcgtcgaacgtgctgctcgacggcgacatggaggcggtgctgtcggactacgcgctggtgccggtggtcacggcgagcgcggcggcgcaggtgatggtggcgtacaaggcgccggagtgcgtcgcggcggcggcggccggcaagccgtcgaagaagagcgacgtgtggagcctcgggatcctcatcctcgaggtgctcaccggcaagttcccggcgaactacctccgccaGGggGGCGGCAGGACAACGCCGACCTCGCCGGCTGGCTCCGTCGTCAGCGAGGAGCGCACCGGCGAGGTGTTCGACAAGGACATGGCCGCCGCCGGCGCCGGCGCCGAGGACGACATGCTCAAGCTGCTCCACGTCGGCCTCGGCTGCTGCGACGCCGACGTCGACCAGAGGTGGGAGCTCAAGACGGCGATCGCGCGCATCGAGGAGATCAGGGTTCCGGACCCCACCCCCACCCCCGCCGCCGCCGCTGACGCCGCCGAGCCCTCGCCGTCGACGACGACGACGACGAACTCCGGCGAGACCCGGTCGTAA
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| Protein seq | MARPRPPGLIAVAAAAALVAWCLCGPASAAAAAGGEAGGGAGPEGDVLIAFRETLRGPDGAPPGPLRAWGTPAVPCRGKASQWFGVSCHGNGSVQGLQLERLGLSGAAPDLGLLAALPGLRVLSLANNAIAGAFPNVSALAMLKMLYLSRNRFSGVVPDGTFHTMRGLRKLHLSSNELSGPIPSSITSPRLLELSLAHNQFNGPLPDFSQPELRYVDVSSNNLSGPIPEGLSRFNASMFSGNEYLCGKPLDTPCDKLASPSNMSTFMTIAVVLIVVGVILAAAGIATGVIGRRRRKRRRRRPGPGEPGGDQTPSNPKLHTAPAVNINRGSATAAASTAAAAGTSASGGGGGAAAKRGGRRDEHGRLVFVQESRKRFEIEDLLRASAEVLGSGNFGSSYKATLQERPAVVVKRFKDMNGVGREDFSEHMRRLGRLSHPNLLPRLRIIRGTARGLGHLYDELPMLTVPHGHLKSSNVLLDGDMEAVLSDYALVPVVTASAAAQVMVAYKAPECVAAAAAGKPSKKSDVWSLGILILEVLTGKFPANYLRQGGGRTTPTSPAGSVVSEERTGEVFDKDMAAAGAGAEDDMLKLLHVGLGCCDADVDQRWELKTAIARIEEIRVPDPTPTPAAAADAAEPSPSTTTTTNSGETRS |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 [UniProtKB/Swiss-Prot:C0LGR9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0005860 | OsKeNa_02g0005860.01 | Chr02 | 4045368 | 4048095 | + | NAM | ||
| CDS seq | atggcgcggcctcggccgcccggcctcatcgccgtcgctgccgccgccgccctcgtcgcctggtgtctttgcgggcctgcctccgccgccgccgccgccggtggcgaggcgggcggcggcgcggggcccgagggcgacgtgctgatcgcgttccgggagacgctgcgggggccggacggcgcgccgccggggccgctgcgagcgtggggcacgccggcggtgccgtgccgcggcaaggcgtcgcagtggttcggcgtgtcgtgccacgggaacggcagcgtgcaggggctgcagctggagcggctgggcttgtcgggcgcggcgcccgacctgggcctgctcgccgcgctcccGGggctccgcgtgctcagcctcgccaacaacgccatcgccggcgcgttccccaacgtgtcggcgctcgccatgctcaagatgctctacctctcccgcaaccgcttctccggcgtcgtccccgacggcaccttccacaccatgcgcggcctccgcaagctccacctctcctccaacgagctctccggCccgatccccagctccatcacctcgccgcggctgctcgagctgtcgctcgcgcacaaccagttcaacgggccattgccggacttctcccagccggagctccgctacgtcgacgtctccagcaacaacctctccggccctatccccgaaggcctcagccgcttcaacgccagcatgttctcaggtaacgagtatctctgcggcaagccgctcgacacgccctgcgacaagctcgcctcgccgtcgaacatgtcgacgttcatgaccatcgccgttgtgctcatcgtcgtcggcgtgatcctcgccgcggcggggatcgcgacgggggtcatcggccgcaggaggcggaagcggcggcggcgacgccccgggcccggcgagcccggcggcgaccaGacgccctccaacccgaagctccacaccgcgccggccgtgaacatcaaccgtggatccgccaccgccgctgcctccaccgccgccgcagctggaacgtcggcctctggcggcggcggcggcgcggcggcgaagcgaggggggagacgggacgagcacgggcggctggtgttcgtccaggagagccggaagcggttcgagatcgaggacctgctgcgtgcgtcggcggaggtgctcggcagcggcaacttcgggtcgtcgtacaaggcgacgctccaggagcgccccgccgtggtggtgaagcggttcaaggacatgaacggcgtcgggcgcgaggacttctccgaacacatgcgccgcctcggccgcctctcccaccccaacctcctccccaggctgaggataatcagggggacggcgagggggttggggcacctgtacgacgagctgccgatgctgacggtgccgcacggccacctcaagtcgtcgaacgtgctgctcgacggcgacatggaggcggtgctgtcggactacgcgctggtgccggtggtcacggcgagcgcggcggcgcaggtgatggtggcgtacaaggcgccggagtgcgtcgcggcggcggcggccggcaagccgtcgaagaagagcgacgtgtggagcctcgggatcctcatcctcgaggtgctcaccggcaagttcccggcgaactacctccgccaGGggGGCGGCAGGACAACGCCGACCTCGCCGGCTGGCTCCGTCGTCAGCGAGGAGCGCACCGGCGAGGTGTTCGACAAGGACATGGCCGCCGCCGGCGCCGGCGCCGAGGACGACATGCTCAAGCTGCTCCACGTCGGCCTCGGCTGCTGCGACGCCGACGTCGACCAGAGGTGGGAGCTCAAGACGGCGATCGCGCGCATCGAGGAGATCAGGGTTCCGGACCCCACCCCCACCCCCGCCGCCGCCGCTGACGCCGCCGAGCCCTCGCCGTCGACGACGACGACGACGAACTCCGGCGAGACCCGGTCGTAA
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| Protein seq | MARPRPPGLIAVAAAAALVAWCLCGPASAAAAAGGEAGGGAGPEGDVLIAFRETLRGPDGAPPGPLRAWGTPAVPCRGKASQWFGVSCHGNGSVQGLQLERLGLSGAAPDLGLLAALPGLRVLSLANNAIAGAFPNVSALAMLKMLYLSRNRFSGVVPDGTFHTMRGLRKLHLSSNELSGPIPSSITSPRLLELSLAHNQFNGPLPDFSQPELRYVDVSSNNLSGPIPEGLSRFNASMFSGNEYLCGKPLDTPCDKLASPSNMSTFMTIAVVLIVVGVILAAAGIATGVIGRRRRKRRRRRPGPGEPGGDQTPSNPKLHTAPAVNINRGSATAAASTAAAAGTSASGGGGGAAAKRGGRRDEHGRLVFVQESRKRFEIEDLLRASAEVLGSGNFGSSYKATLQERPAVVVKRFKDMNGVGREDFSEHMRRLGRLSHPNLLPRLRIIRGTARGLGHLYDELPMLTVPHGHLKSSNVLLDGDMEAVLSDYALVPVVTASAAAQVMVAYKAPECVAAAAAGKPSKKSDVWSLGILILEVLTGKFPANYLRQGGGRTTPTSPAGSVVSEERTGEVFDKDMAAAGAGAEDDMLKLLHVGLGCCDADVDQRWELKTAIARIEEIRVPDPTPTPAAAADAAEPSPSTTTTTNSGETRS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_02g0005860 | OsKeNa_02g0005860.02 | Chr02 | 4045258 | 4048587 | + | IsoSeq | ||
| CDS seq | atgcacatgcaaaagcatagccacccactgccttctccccccaccccgcgtcgcgccacggtcaccgtcgccggccaccgccccgCcccgccgagccgagccgaagcgccatggcgcggcctcggccgcccggcctcatcgccgtcgctgccgccgccgccctcgtcgcctggtgtctttgcgggcctgcctccgccgccgccgccgccggtggcgaggcgggcggcggcgcggggcccgagggcgacg
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| Protein seq | MHMQKHSHPLPSPPTPRRATVTVAGHRPAPPSRAEAPWRGLGRPASSPSLPPPPSSPGVFAGLPPPPPPPVARRAAARGPRAT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.717030 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0174400 | RBH | 0.091201 | 0.0 | 0.595187 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g07810 | RBH | 0.000000 | 0.0 | 0.147525 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0174400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0005750 | RBH | 0.0 | 0.0 | 0.308473 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0025150 | RBH | 0.0 | 0.461801 | 0.882557 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0005670 | RBH | 0.0 | 0.0 | 0.334901 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0005600 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0005630 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0069900 | RBH | 0.00672 | 0.1662065 | 0.181459 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0005600 | RBH | 0.0 | 0.0 | 0.209120 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0072100 | RBH | 0 | 0.0619535 | 0.083623 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006010 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0005580 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0005890 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0005820 | RBH | 0.0 | 0.0 | 0.114342 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0005600 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G005760 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0005720 | RBH | 0.0 | 0.000000 | 0.000000 |
