Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_Ung0001910 | OGI:99006790 | 1/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | ChrUN-Ctg32:129928-133495 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GAAACCAAATCCAAACCCAAACCCATCCATCACCGCATCTCATCGTCTCCGTCTCCGTCTCCGGCGATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGGGGGGCCCGCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGTATGCGTAGCACCGATTGGTAGACTTGTTGAGCTTTCTTTCCGCATTGCGTACCCTGGCCTTACCTTAACTTTGTTGCTGCTGCTGCTGCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGGTCAGCTTCCTTCCTTCCTTCCTAAATCCTTCTCCCTCCACTGTTATTTCTCAGTGCTTTGTACACCGAGTATGTTGTTGCTGTTGTATGCAGGTTATCATCTTCTCAGTTTTTGGCTCAAAAACCTGAATCTTTACACATTTTTCCTTGGCAAGATCAACGCTCGCGTCTACGCTGGAGTTCATTTTACTCAACATTTTAAAGTAGATAAAATCATAACCAACTGATGTTCCAAGACCATGGCTGAGAGCCCTGGGATCCTGGGGCTATTAGTCTTCTAATTTTCACTTTTCACATAATAGGAACGGTTCCTGATGTAATAGAGCTGAATTGCACTCAACAACATTGCTGCTTCTTTAGCTCATACTTCTGCTGTTTTGCAGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTAAGTAAATGGGTTCAGTAATGCACAAGGCAGGGGGAAAACTTTCATCACTCTTGTCTCATCTTTATATACTCATCATTTACTTTGATTCAGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGTATGAATTCTTTCCTCTTTTTTTTTAGATAATGGAAGAGTACATGAATTCTTTCCTGCAACATTCATTTGGAATTTTAGTATGAACATAGCATTAAAACTTAAAATACTTACAAATCTTCACAGGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAACGTAAGATTTTGCTCCTTCTTATGTAACCTTCTTCAAGCTACTCTTTCTCTGGACCAGCATCAATTTTTTGTTATTTTTGCTAGTCACCTTGCCTTCAATTTTGTTTGCCACTTTGATTTTGAACCATAACCAGTCTTTGTATTTTTACTGGGTGGTAAAACATAGTGTTTGAACTTTGAAACCTCACTTGTTTCCTTTCAGCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAAGAGTTGAATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCAGTGAGTAATGCGTCTGTGCGCTCTCTTTGTTATCAGCATTTTGTTTGGAAGTGCTGAAATATTTCATAATAACAACAGCCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGTAAGTATTTTAAGCTTGTCTAGTTGATGTTTTTTTCTTTAGTATTTCATATGTTATCTGAATTATGAATTTAGGAGAAGGTGGGGGGCATATGAGTTTTGTGTATATCTTTTTTAAGTTGCACAGCTATTTGCTCTTTATTCATTTCAGTCTGTAGTGGTCTAGCTTCTACTGTTCTGTTACGAAGAAGCTAAACCATGCTGGGTTTCTTGGATGGTTGCTCTACTTAGCTTTTTTTGAACATTTTAGAGTGGATAATCAGAGTGTTGAGCTGAAAATCTGATTAGTTTATTCTATGCTTCTGGGCCAAGATTTTGCTTTCTCTAGCTTCTAATAACTCTGAAAGAGGTGTTTGTTCTCCCCTGGAGGCTTCCCCCCCCCCCCCCTTTTCTTGCCTAGTAAACTAATTTTGGGATTTTGTTATTCCATTGACCATTAATTATTTCTGCAGGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGTAATGTTAGGATTGATCGCCCTTTTACCCCGTTTTAGATTAGTGGCCTTGCATCTTCTACCAGATGAAAGCTTACATCAAATAATGGAACCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGTAAACTCATAACTATAAATGTCATTATCTTTTTTGGAAGAAGAGAAAGAAATGTTTTTTTGTCTGTGTATTTATTCTTCTTGTACCAAGACAAACATTTTTCTCTTGTGCAGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGTAGTAATCCTTATGTGCCTTTCCCTTCTCAAGCAGCTTAAATGTGTGGCATCGTAAAAATAGAACATTGAAGCATCATATGGTTTCTTTTCAATGGTGGTAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAAACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTTCCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTTGTCTTTGCTGCTGCTGTTTTTGTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCCCTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCTTCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCATGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGCACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCACCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTATGTTTTGTTATCTACGTGGAGTTATTTTGGACATCTGAACCTTTAGATTCCAGTGGAGATGATATCATCTCCAAAAAGATCTTGTCATGGAGTTGACTATCAATGTTTTGGCGGACAGGAAAAAAATGAAATTAAATTTGGATA
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| CDS seq | ATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGGGGGGCCCGCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAACCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAAGAGTTGAATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAA
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| Protein seq | MATKPRRRSPSLSSSSSTSYSRSPASPSSSPSRSRSPPRPAGGARSPSPPPPPPPPRKASPPPESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKALLYLDGGQIDGNVVKVRFALPPQQQRAAASPKALHPSPKRDVVDHNKVGPSAEKATKQQPRKPSPQRKPAPSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRRPGSPIRRRSPSPPPRRLRSPRHLSPRRDRGSPIRRRSPLPRRRLTPPRRMWSPPRRPQSLRHRSRSPIHRPIRSPSRSISPRRGRGPPVRRGRSSSSYSDSPTPPRRGPRRVLRSRSPRRPLRGRSASSYSRSSSSSGSPIRN |
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| Function | Serine/arginine-rich splicing factor SR45 [UniProtKB/Swiss-Prot:Q9SEE9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_Ung0001910 | OsKYG_Ung0001910.02 | ChrUN-Ctg32 | 129928 | 133387 | + | NAM | ||
| CDS seq | ATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGGGGGGCCCGCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAAGAGTTGAATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAG
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| Protein seq | MATKPRRRSPSLSSSSSTSYSRSPASPSSSPSRSRSPPRPAGGARSPSPPPPPPPPRKASPPPESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKALLYLDGGQIDGNVVKVRFALPPQQQRAAASPKALHPSPKRDVVDHNKVGPSAEKATKQQPRKPASPQRKPAPSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRRPGSPIRRRSPSPPPRRLRSPRHLSPRRDRGSPIRRRSPLPRLLQGGCGVLPEDHSHFAIAVDLPFTDQFAPLPDRFLHAGTKKGAQKSQS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_Ung0001910 | OsKYG_Ung0001910.01 | ChrUN-Ctg32 | 129928 | 133495 | + | NAM | ||
| CDS seq | ATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGCGCTCCCCCGCATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGGGGGGGGCCCGCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGAAAGCGTCTCCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGCAGCCCAGGAAACCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTCCTCCAAGTCGAAGAGTTGAATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAA
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| Protein seq | MATKPRRRSPSLSSSSSTSYSRSPASPSSSPSRSRSPPRPAGGARSPSPPPPPPPPRKASPPPESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKALLYLDGGQIDGNVVKVRFALPPQQQRAAASPKALHPSPKRDVVDHNKVGPSAEKATKQQPRKPSPQRKPAPSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRRPGSPIRRRSPSPPPRRLRSPRHLSPRRDRGSPIRRRSPLPRRRLTPPRRMWSPPRRPQSLRHRSRSPIHRPIRSPSRSISPRRGRGPPVRRGRSSSSYSDSPTPPRRGPRRVLRSRSPRRPLRGRSASSYSRSSSSSGSPIRN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | ChrUN-Ctg32 | 131243 | 131448 | + | OsKYG_Ung0001910.02 | OsKYG_Ung0001910.02,OsKYG_Ung0001910.01 | All |
| SE | ChrUN-Ctg32 | 132376 | 132657 | + | OsKYG_Ung0001910.01 | OsKYG_Ung0001910.02,OsKYG_Ung0001910.01 | All |
| A5 | ChrUN-Ctg32 | 131798 | 132260 | + | OsKYG_Ung0001910.01 | OsKYG_Ung0001910.02,OsKYG_Ung0001910.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.294566 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0105900 | SBH | 1.916974 | 3.343771 | 5.314577 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g01540 | SBH | 1.220422 | 1.965069 | 1.158791 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0105900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0000460 | SBH | 0.609737 | 4.320593 | 10.041445 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0000450 | SBH | 0.503957 | 2.054094 | 5.864076 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0000480 | SBH | 0.923815 | 11.631597 | 17.489538 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0000460 | SBH | 0.337889 | 0.287735 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0000460 | SBH | 2.530299 | 1.857503 | 20.024275 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0004900 | SBH | 2.995616 | 9.1411135 | 10.175304 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0000470 | SBH | 0.702319 | 0.443938 | 1.998512 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0000480 | SBH | 0.044113 | 0.480498 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0000430 | RBH | 0.193837 | 1.525494 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0000450 | SBH | 6.665135 | 3.433362 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0000480 | SBH | 1.076841 | 0.733531 | 1.769956 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0000480 | SBH | 0.665322 | 4.262145 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G000440 | SBH | 0.375100 | 1.759073 | 4.909905 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0000470 | SBH | 3.397593 | 23.838415 | 14.006028 |
