Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_12g0002250 | OGI:12004300 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr12:1586602-1587306 | ||||||||
| Gene Symbol | SDRLK-57, RLCK360, OsRLCK360, SDK3 | ||||||||||
| DNA seq | ATGTGGGGATTTTGTTCGGAAGGAATACATAGGATTTTAGTCTATGAGTACATTGAGAATGGATCATTGGCCAAAGTACTATTTGATAGGAGAGATTCCAGCAAGTTTCTTGGATGGAAGCAAAGGTTCAACATTGCTCTAGGTGTGGCCAAGGGGTTGGCATATCTTCACAATGAATGCCTAGAGTGGATCATCCATTGTGACATGAAGCCCGAGAACATATTGTTGGATGAAGATATGGAGCCTAAAATCACTGACTTTGGCTTGTCCAAGTTGTTGAACAGAGATGGGTCTGGTTCTGAAATGTCACGGATTCGGGGGACGAGAGGATATATGGCTCCCGAGTGGGTTTCTAGCCTTCCCATCACCGAGAAGGTTGATGTGTATAGTTATGGAGTTGTTCTTCTTGAGCTGGTGAAAGGGAGGAGGATTATAGAATGGGTAGTGGATGGGAAAGATGGAGTAGAAACTGATGTGAGAAGCGTGGTTAAGATGGTTGTTGACAAACTGGACAGCAAGAATGAATCATGGATTATGGACTTAATTGATGATCAATTTGGTGGTGAATTTAATCATTTGCAGGCTCAGCTAGTTATAAAATTGGCCATTTCATGCCTGGAAGAAGATAGAAACAGGAGGCCAAGCATGAAGTACATAGTGCAAATGCTCATTTCTGCTGAAGATGAAGGTCATGCTTTTACCTAA
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| CDS seq | ATGTGGGGATTTTGTTCGGAAGGAATACATAGGATTTTAGTCTATGAGTACATTGAGAATGGATCATTGGCCAAAGTACTATTTGATAGGAGAGATTCCAGCAAGTTTCTTGGATGGAAGCAAAGGTTCAACATTGCTCTAGGTGTGGCCAAGGGGTTGGCATATCTTCACAATGAATGCCTAGAGTGGATCATCCATTGTGACATGAAGCCCGAGAACATATTGTTGGATGAAGATATGGAGCCTAAAATCACTGACTTTGGCTTGTCCAAGTTGTTGAACAGAGATGGGTCTGGTTCTGAAATGTCACGGATTCGGGGGACGAGAGGATATATGGCTCCCGAGTGGGTTTCTAGCCTTCCCATCACCGAGAAGGTTGATGTGTATAGTTATGGAGTTGTTCTTCTTGAGCTGGTGAAAGGGAGGAGGATTATAGAATGGGTAGTGGATGGGAAAGATGGAGTAGAAACTGATGTGAGAAGCGTGGTTAAGATGGTTGTTGACAAACTGGACAGCAAGAATGAATCATGGATTATGGACTTAATTGATGATCAATTTGGTGGTGAATTTAATCATTTGCAGGCTCAGCTAGTTATAAAATTGGCCATTTCATGCCTGGAAGAAGATAGAAACAGGAGGCCAAGCATGAAGTACATAGTGCAAATGCTCATTTCTGCTGAAGATGAAGGTCATGCTTTTACCTAA
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| Protein seq | MWGFCSEGIHRILVYEYIENGSLAKVLFDRRDSSKFLGWKQRFNIALGVAKGLAYLHNECLEWIIHCDMKPENILLDEDMEPKITDFGLSKLLNRDGSGSEMSRIRGTRGYMAPEWVSSLPITEKVDVYSYGVVLLELVKGRRIIEWVVDGKDGVETDVRSVVKMVVDKLDSKNESWIMDLIDDQFGGEFNHLQAQLVIKLAISCLEEDRNRRPSMKYIVQMLISAEDEGHAFT |
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| Function | Putative receptor protein kinase ZmPK1 [UniProtKB/Swiss-Prot:P17801] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_12g0002250 | OsKYG_12g0002250.01 | Chr12 | 1586602 | 1587306 | + | NAM | ||
| CDS seq | ATGTGGGGATTTTGTTCGGAAGGAATACATAGGATTTTAGTCTATGAGTACATTGAGAATGGATCATTGGCCAAAGTACTATTTGATAGGAGAGATTCCAGCAAGTTTCTTGGATGGAAGCAAAGGTTCAACATTGCTCTAGGTGTGGCCAAGGGGTTGGCATATCTTCACAATGAATGCCTAGAGTGGATCATCCATTGTGACATGAAGCCCGAGAACATATTGTTGGATGAAGATATGGAGCCTAAAATCACTGACTTTGGCTTGTCCAAGTTGTTGAACAGAGATGGGTCTGGTTCTGAAATGTCACGGATTCGGGGGACGAGAGGATATATGGCTCCCGAGTGGGTTTCTAGCCTTCCCATCACCGAGAAGGTTGATGTGTATAGTTATGGAGTTGTTCTTCTTGAGCTGGTGAAAGGGAGGAGGATTATAGAATGGGTAGTGGATGGGAAAGATGGAGTAGAAACTGATGTGAGAAGCGTGGTTAAGATGGTTGTTGACAAACTGGACAGCAAGAATGAATCATGGATTATGGACTTAATTGATGATCAATTTGGTGGTGAATTTAATCATTTGCAGGCTCAGCTAGTTATAAAATTGGCCATTTCATGCCTGGAAGAAGATAGAAACAGGAGGCCAAGCATGAAGTACATAGTGCAAATGCTCATTTCTGCTGAAGATGAAGGTCATGCTTTTACCTAA
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| Protein seq | MWGFCSEGIHRILVYEYIENGSLAKVLFDRRDSSKFLGWKQRFNIALGVAKGLAYLHNECLEWIIHCDMKPENILLDEDMEPKITDFGLSKLLNRDGSGSEMSRIRGTRGYMAPEWVSSLPITEKVDVYSYGVVLLELVKGRRIIEWVVDGKDGVETDVRSVVKMVVDKLDSKNESWIMDLIDDQFGGEFNHLQAQLVIKLAISCLEEDRNRRPSMKYIVQMLISAEDEGHAFT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0130300 | SBH | 0.0 | 0.0 | 0.260378 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g03650 | RBH | 0.0 | 0.0 | 0.067026 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0130300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0002000 | RBH | 0.0 | 0.0 | 0.252874 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0002200 | RBH | 0.0 | 0.0 | 0.374046 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0002220 | RBH | 0.330282 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0002030 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0002220 | SBH | 0.000000 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0026300 | RBH | 0.0146065 | 2.3622525 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0002230 | SBH | 0.118008 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0027200 | RBH | 0.017123 | 3.1356365 | 0.0060645 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0002070 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0002210 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0002240 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0002140 | SBH | 0.072488 | 0.0 | 0.059450 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0002220 | SBH | 0.049379 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G002130 | RBH | 0.235437 | 0.0 | 0.148408 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0002350 | SBH | 1.537756 | 0.0 | 0.180390 |
