Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_11g0024440 | OGI:11081580 | 1/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr11:31489494-31490912 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCATTGCATGCTGCACCGGTCACCGCCACACTCAAAACCAGCCAAGGGAACGCAGGCGACCAAAAAAGTGTCGGATTTGGCTGTCACTGTCCTTGGATCAACTGACGAAGGCCACCTAGCCAACACACATATCATGATATTAGGCAACAACCCATGACCACCGTGTTGGTTCACCACCACCATGCACTTTCCCCACGCAGAGCTAGTTCAGGGCAAGGCAGATCCATCTATCCTCAGAAGAAATCTATCGTCGTCAACCACTACGACTGTGGGTGAGGCCCAAACCCAACGGGAGAGATCCTGTCGCGCCCCCTTTCTTGTGGTCACTCAGGCTTCCGGCTACCTGCTCCAGTGACGACGAGGTAGAGATAGAAGAGGGACAGGAGTAGTGGTATAAGGGCTCGCGAGTCATAGGGTTTTGAGTCTAAGTGCTCATTTGGTGTTGGTTTGTGTGAACCTTTTGTAACAAGTGAATTTATGCACTCTTGTTTAGTCGTTGGCTGTATACACCCGTTTTGGGGTGTAGAAGTTGGATTTTAATCCATTTTCTAAAAAAAATGAATTTTTAACTGGGAGCAAATAAGGAGATGAATCTCATTTGGTTGACAACGAGTACAATTAAAGGGTGGGTGGATTGGTTGGGGGGCATGGGGGATTAGACTTAGGCATCAGCATACCCAAAAAGAAGAGCAATGTTGTTTTAGGATTATGCATTAATTAATAGCCCTAACCAACGTTTACTGCAAATTGAAATTAATAGGAGTTCATTAAGATTGAAGACATGTTTTGTGATTTGTAGGCTTAGATCAAGTTGAATTGATTGAACTTAAACTTTGTTTGTATTTATGTGCATTCGTGGAGGCTATTGGATTTTGCTCTTGAGATGTGTATGTGCACATCTAGTGAAAGTTTTCTTATTTCTGACACTAGTCAGCCAAGAAAAGTTATGTTTTGTAGTTGGAGAAGAGTGACAATCTAGCGTTACAAAAACTGGTAATGAGTGCTCTTAGTGTGACAAATTTATCCATACCTGCTTTCATCCGATTTATTTGCTCCATCCCCACGATCCTTTTCTAGAACTGCAGACTTCTCAGTAGAGCTTTCTTTCACGATATTTTGTTGTTTTTTCAGAATCCTGCATTCTTCCTCCCGTGTCCCGGCATTGCTAACATCCATACCATCAAAGGTCCAATCTACACATCGGATGTTGACGCTAGGACGTCCTGGATGCATCCTAATAGCGTTAGTCAAAGCTGACTCTGCAAATCTTCTACAATGATCATGAGCAGTAGAAGCGACCCTAATTTTGGCAGAGATCTCTTCAAGTCCAGACAGATGTTCGATGCCAACAGGAATAATATCATGCTGATCTGCTCTATGGACATCAAAACCTAGCTTGAGCTTCCTTAGACTAGGCAT
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| CDS seq | ATGCCTAGTCTAAGGAAGCTCAAGCTAGGTTTTGATGTCCATAGAGCAGATCAGCATGATATTATTCCTGTTGGCATCGAACATCTGTCTGGACTTGAAGAGATCTCTGCCAAAATTAGGGTCGCTTCTACTGCTCATGATCATTGTAGAAGATTTGCAGAGTCAGCTTTGACTAACGCTATTAGGATGCATCCAGGACGTCCTAGCGTCAACATCCGATGTGTAGATTGGACCTTTGATGGTATGGATGTTAGCAATGCCGGGACACGGGAGGAAGAATGCAGGATTCTGAAAAAACAACAAAATATCGTGAAAGAAAGCTCTACTGAGAAGTCTGCAGTTCTAGAAAAGGATCGTGGGGATGGAGCAAATAAATCGGATGAAAGCAGGTGGCCTTCGTCAGTTGATCCAAGGACAGTGACAGCCAAATCCGACACTTTTTTGGTCGCCTGCGTTCCCTTGGCTGGTTTTGAGTGTGGCGGTGACCGGTGCAGCATGCAATGA
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| Protein seq | MPSLRKLKLGFDVHRADQHDIIPVGIEHLSGLEEISAKIRVASTAHDHCRRFAESALTNAIRMHPGRPSVNIRCVDWTFDGMDVSNAGTREEECRILKKQQNIVKESSTEKSAVLEKDRGDGANKSDESRWPSSVDPRTVTAKSDTFLVACVPLAGFECGGDRCSMQ |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_11g0024440 | OsKYG_11g0024440.01 | Chr11 | 31489494 | 31490912 | - | NAM | ||
| CDS seq | ATGCCTAGTCTAAGGAAGCTCAAGCTAGGTTTTGATGTCCATAGAGCAGATCAGCATGATATTATTCCTGTTGGCATCGAACATCTGTCTGGACTTGAAGAGATCTCTGCCAAAATTAGGGTCGCTTCTACTGCTCATGATCATTGTAGAAGATTTGCAGAGTCAGCTTTGACTAACGCTATTAGGATGCATCCAGGACGTCCTAGCGTCAACATCCGATGTGTAGATTGGACCTTTGATGGTATGGATGTTAGCAATGCCGGGACACGGGAGGAAGAATGCAGGATTCTGAAAAAACAACAAAATATCGTGAAAGAAAGCTCTACTGAGAAGTCTGCAGTTCTAGAAAAGGATCGTGGGGATGGAGCAAATAAATCGGATGAAAGCAGGTGGCCTTCGTCAGTTGATCCAAGGACAGTGACAGCCAAATCCGACACTTTTTTGGTCGCCTGCGTTCCCTTGGCTGGTTTTGAGTGTGGCGGTGACCGGTGCAGCATGCAATGA
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| Protein seq | MPSLRKLKLGFDVHRADQHDIIPVGIEHLSGLEEISAKIRVASTAHDHCRRFAESALTNAIRMHPGRPSVNIRCVDWTFDGMDVSNAGTREEECRILKKQQNIVKESSTEKSAVLEKDRGDGANKSDESRWPSSVDPRTVTAKSDTFLVACVPLAGFECGGDRCSMQ |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0686400 | SBH | 0.830266 | 0.567043 | 0.670688 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45750 | SBH | 2.154246 | 1.370123 | 0.517376 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0686400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024380 | SBH | 0.099646 | 2.008879 | 0.759783 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024210 | SBH | 0.198599 | 2.936731 | 2.884382 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023750 | SBH | 0.966452 | 2.168166 | 3.543668 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023600 | SBH | 0.021435 | 0.193460 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024160 | SBH | 2.927123 | 1.054704 | 2.802874 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0438400 | SBH | 0.0861995 | 0.1629875 | 0.368956 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024520 | SBH | 0.144832 | 0.687491 | 0.303780 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0436000 | SBH | 3.5425875 | 3.616399 | 5.6041285 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024430 | SBH | 0.082148 | 0.037677 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023740 | SBH | 2.832259 | 19.498186 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023590 | SBH | 1.869972 | 0.0 | 2.139541 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023970 | SBH | 0.182915 | 0.802238 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023960 | SBH | 0.599942 | 0.867437 | 1.404776 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024170 | SBH | 1.211280 | 7.063657 | 4.711861 |
