Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0023750 | OGI:11081480 | 12/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:27647470-27656469 | ||||||||
| Gene Symbol | WRKY125, OsWRKY125, - | ||||||||||
| DNA seq | ttaatgaaatatccatttttctaaaaaaagggtgttggtcctagtaaattggcaatgctgaattcttagtgtgacaaattcataccttctgtcaacaaatttatgtgcttcttcgtcgtgctcgttttgtagaactgcagatttctcacttaagtcttctttcacaaaatgctcctgtttcattggagtcctacattcttcctctcgtgtccccacacagtcattatccttatcatgaaaggtccaatccacacaccgtatgttgacgctaggacgtcctggatgcatcataaaggcgttagtcaaagctgactctgcaaatcttctacaatgatcatgagcagtacaggcgaccctaatttttgcagagatctcttcaagtccagacagatgttcgatgccaacaggaataatatcatgctgatctgctatatggacatcaaaacctagcttgagcttccttagactaggcattgcacccatctcaaatttcatccatgctacactgcatataaactcgaagtatttgaggattgagaaccctgcattgtcaaagacaatcctttctgcaggctttgtgtggacataaagtgacaaaacagtgagtttcggtaatactcctagaacatcaatactattacttgttacttcccttatcccaatcttcaaaatgcagaggtttccaagctgcccaatccaatttgggaggttagaaaagatgcaaacacatggtaacaactcaaacctctgaagaagggctggtggagaggacacactgctccagccatcaacattgatcctcgtcctgtcaatatgtagagtatctggacaggaagagccaggaggcgataaagttatagatgtgagattacggagtttccccagaatggatccaagatatttcatattatccttcagattgtcagaatgtatttcagaataggtgagctgcaaatcccggagattgctcagctcaccaaggctccatagattctccgctgagttacagctgagatcaaaatatccaattgtacgaagcgatgtcatgtggacaattccactgggcaggtttgtcttagcaggaagagtaagatgcagcaaacatggcaaataaatgtctgttggaacttcacttattgtcccatctattttcagtgtctccaaatatggtagaccttgcatctgggttggcagttttacggtgacattagaggtgaccttcaaatatctcagtcgaacaagttctgaaattttagtgagatcaaaaatgccgatgctatcctcatcacccaaaatatgtagaactagaactttaataagtcgaaactccataacgaaaggcatatacttcaagaccccgaagaaggcaactgtccgaacttgggacaatctcatactggtaggcggagttgcatcttctacgttactaaagtggatagataatcgtcgaaccttgtcagcaaatcttatagttgcctgtgaatggtctattgcaataataaaattttcttctattgacttgtatgtaacgaaattgagtaccatatggtgaactacacaggacaaaacctcaccactgtcatcgatatgtacaggctggatgatttttctgcccacaagctcatcaaaataggcccttgaaatttcttccttgtcatgcccttcagttgcacagataaaaccttcagctatccattgactcactaaatcatctttccaaattatgtgatcttcttgatacatactaagatacaacatgcataccttcaaatgctgaggaagattgttgtaacaaatgttcagtagttgtttcatcccttccaaagtaggatttgccatcaaaccgtaacctaaggatttgtttatataatccaattgttcttgtttctcaagctggcttgctaaaagactagcaacagtgacaatagctagcggcaaaccaccacatttccttacaatatcatataatgtttcactgacttctggaggacacttagaatgagagccaaagactatactgaaaaatagttttcttgagtcaccctcaccaaaaggtttcatcttgaaaataaatttcaagtcataactacaagattgcaaagctagatcctcaatttctgttgtggttagtattctgctggaactattaccatccggcaaagcgcacttaataacatcccatgtggatgtagcccataaaccatcaattatgatcaagtacctgcgattaaggggagaatttttaacataactaaatggaagctccacttgttgttagtattctgctagaatttgcatgatgaaatggtaaacattaggtgtaagacggatttttctctcgattttgtacactatgcaacttataacagccatcttgaggctaaaaatgattagaagacatgatgaaatataagaggtaggattagaataggaaatgagtggattgttaagataaaataaggtgacaggaatggatggctaccattaaaccttaccctttgatgggtgggatatcttttcccaatctcatttgctaaatgagccctaattgtggctaaggctgatatcagggatagcaagcaacagacacaccctgctattgttatgttatacattacatataatttagtagtatagacttcagaggagctggtatctgtctttcttatctatctgccacttcaatgaaatattgaacccatgcattcaatccttgactaaaaaatttgtatttatacttatgaagataatattagtatcagtacaacagtcaaatgcaccgattaacaattagtagcagacacaaacaaaaacaaggaaatagtcagtttcacaccccgaaaacattgtacgtacctcttatcttgcagatgtgtcctgatactggaaattaggctatgcaccttccaattgtcaggtgactggtgcggctgaacctgtgagaggatattgatgagaagcctcctcatatcagtcttctgagatgtctgcacaaatgcccagcactcgaactgccgctgaagcttgcagtacagcttgttggcgagcgtagtcttgccaactcctccaactcccacgatggacaccaccttgagcttctcctctccgcacacatcgagcaagttttcaagcttgttcaccgcggcgttgatgccaacaagacccgcggactccatgaaccgcgtgggttgcctagatgaggtagaagatacatcacctctagtggtagtagaagtagtggtgataccagtgggtatgtttttgagcttgttcaggatggcttccacatcggggtggatatgacgcactttattggcgtgctccctgaactgcacgagagaagcagtcgggatactagcgagcaagtttttgagcttgttcaggtcattcagggcagcttccataccatcggcgtctataccgacagaacagacgttgtcggtgtgctctctgaactgcgtgggatgccaaggtgttgcagagcatacatctcctccagtagtagaagcaatggtgatgccaccaaggttgttgtacatggtgtggcgttgaagcgcctcctgggtgcgcaggctgaattctctgatcttgttggccatccacaaccgctgcttaagtttccagggaacccaagggatcatctttccatgccgctgattgaacttacggcgacaaatattaggtccagtatgtgaccgggtggcagtggcggcatgctcatactggtcgatgcaatcctcgatgtcataagagagctcacgtacctccttcatccagcacctgaccaccatggcatggtcctccagctttggcttgctacagtgaccatggaggacggagattatttcctcgagatcttgcttgatgagaggtatctcctcctctgcccccttgggcagcatgctgccatgacgacgcaggagccggtcgagccttcctgggaggttgaacatggagccctccattgatatcttctctgtaaacaaatcaagtgcatgttacagatttgcatggcatggggcattaaatgactgcaaacaaagagctgaaaaagaaggaaataatacaatggaatcactaaaacagacaagagagggattactgaacctacaagctgaaggcatcaaatgatcagagtagcatgagcgagctctccaagcggttggacttaggagagagttcttccattttgcttcattcctagcttccaaatccaatgctttcctctccttgaggattagctttcggtttgcagccaacagtggtcgtctggtcaattcagccattcaacaatattttcttcagaataaatgatcgattggccactgtgtggtgtagctgttggacacttcaataatcactacttgacaagcactgaagcacctttcaagatatatgctttacacaccaatcctcaagtatccctgaaattgagaattacatatcaatgctcaaacttcacattatttacatttgtctcaaaatgcagactcatctgtcaaagtttcacaatttacacacactgccccatattatgttttgcacattttatgatttacaaatgcatgatacgctggactatcgacaaaaaatatctatcttaaataactaaaaacctgaatggcaaagagcaaaacgattagtaaacaggcttttacactaaacgtaaagggattagtagacaagcttttgcacacactaaaacaaatcctttctcaataaaagcgcgcttattttgtactgaaatgtgaaatatgttatgaatttatgaacaaaaacctttcagagatatatgtcctgtattatgaacaagattcttaagtaccttatcgatataaagctactgatctgattatctgaatatttaaaatggcatttaatgatcagcagtttgtgtaaaaaaacacatacttgtcaacaaagatattgtaatatgattttgcactcagttgggggtatccacgcatatacacatatgcatggtgagctattgacttgctgaagacttagaggttgcatgcttgcagctgctgctgctcctccctctagcagtctgtctgatccacaaaagtatctctgcatctcttgtgtgagccaggtcgcatgcaagcaacaaaacacgcccatacttgtccatagagtctgctgcggcgagtgctttctgggaggccatcatggggaagctgttcatggtgctggagaaccagtacaacaagcacaaggtcctcgagcaagaaatcagctccctccagcaagagttccgcatgattgccgccgtcatggacgaccagctcctttctatgggcaggagcgaagcacgcacatctgttgcatggctgcacaacgaggagatgctcgatcttgagcatgacattgaggactgcgtcgaccgtttcatgcacctcctcacctgcaagcatcatcgtggtggggtgcgccagatggcacatgaggtaaagatccgctcgagcttcagtgaagagatccagaagctcaggaggcgcctcagtgaggtgcgccagtgagtcgtcaacatcaattcacctattgcccgtcaatcagccaggtcatcgtcatcgactccgtatcgtgctgcgcacagtctggtgggcattaggcagcccatggaggagctcctctcgctgctagatgaagtggagggcgagccaaagcagttgagggtgacctccatcgtggggttcagtggcttggggaagaccaccctcgccaaggcggtctacgatagccctcatgcaaaggataaattctgcctccgtgcgtggatcaccgctgatggctcaccggaaacgagcaattggatgaaggagatcctgcgcggtgtactccagcaagtgcgtcccggcgatgccatggatgtcgatggccagcatcttgaagcctcgctcaaggagtacctcaaggacaagaggtgaacctcaccgttaggcgcttttatttttatttcctttacaagaacatttttcatttttaagtacaccaataactcttcacgtggaatgttcttggttcaattagctaatttaattatctaaaagattgttcactaatgaccattgcatatgaaaatttatttttacttaaccttttcaccttgtttttcaatttgaccctcttaatattcctcctcaattctcaatttggttattaggtatttaattatcatcgatgacatcaggatggatcaatggaggatcataagttcagcctttgaaaataatggtacaggcagcaggatattacttaccacaactattcagtcagtaactaataggtgcagccatggcaatggttatgtgtatcaaatgaacacacttggtaaagaagactctgaggaactagctttttcagtgcttagatcacctgagttggagaaccattcagaatcattactagggaaatgtgatggtcttcctcttgctctggtcagtgtctctgattatctgaagagctcaactgaggcaacgggagagttgtgtgcaaagctatgccgtgatctgggttctcatctgacaggaaaccatggccatgacaacttttcagaactcaggaaggtgcttcttggcaactatgacagtttttccggctctgctctgagttgcttgctgtatcttggtatattcccaaacaatcatcctctcaggaagaaagttctaatccggcggtggttagctgaaggaaacgcaagaagtgatgacccttggcgcagtgaagaggacactgcagatgacaatttcagtaaccttattgaccagaatatcattcagccagttgacacaagaaacaattctgaagtgaagacgtgcaaaactcatggaattatgcatgaatttttgctgaacaggtccttggccaagagattcatcacgacatcaccgcatgatccaagagttggaatcaatactaccaattcacgccacctttctgttgatgctgctaaacagacaaaatgcatggcatctgacgaggaattatctcgagtccgatctctgacaatctttggggatgcaggtgatgcaatttcttatcttcacaagtgcaatctgatacgagtcttggatctacaagaatgcagtgatttgaacgataatcatctgaaacgcatatgtgtactgtcaccgtggcatctgaaatacctgaaccttgggggcaatatcagtgagcttccaaggagtattgaagggctgcattgtttagagacactggatttaagggaaacagagataaagtttttgcccattgaaggtatcatgctgccccacttagctcacttgtttggaaagtttatgcttcacaaagatgatctgaacaatgtgaagaagataagtaaactattaaaattgttttcatcaaataaaagcaacttgcaaactttagcaggatttatcactgacgggaggaaaggatttcttcaacttattggtcatatgaaaaaactgaggaaggttaagatatggtgcaggcatgttgaaggtagcagtaattacattgctgatctttcaaaggccattcaggaatttaccaaggctcccattgacatggacagagtccgttctctctcaattgattccgaagaatactgtgaaaaattcctaagttcacttgatttggagccatgctctgaatattcgaaataccatctaagttcactaaagatacatggcaagttactccggttgcctccattttttagttctttgtcaggtctcattgatctgtgtattacaccagctactctgacacaagatcatctatcagcactgataaatctgaacagactgctgtacctcaaactgattgctgacaagctcgagaatttagagataaaacatgaagcactactgagcctgagacgcctgtgctttgtggtgaaaagtgtggcgttagcgcagccaaaaatcgagcaaggagctctaccaaaccttgtttcacttcagctgctctgtcaaggactagttggtctttccggcattgagatcagacacctgaaacatcttaaggaaatcaccatcgactctgcagtgactgtacaaacaagacaagattgggaacaggcagcaaagaaccacccaaacaggccaagagttctgttgttcagaaaggttgatccagtggaaagcgaggaaccgggaagaccctgtgccataagggggagggggaaaagttctataggccaagaaagttcagaagatggttcagattctagccttaagaggatgagacttgcagagccttcttcttcttcgcagcttcaggtgaccggccatccgcatccggtggtggtagcagccaccgaagcagcatcccagccttccatggcaaatctctagcacatttatacaacttaagcagacaggctgcaataaagactgtaatattgaccttttgcagagttaaatgtatcctatatatcgggatacccaaattatgaaccgagtttcgtgtaaaaaacatgggttaatgtctgaaatttctgcttttcttactgaaacaaaaactgaatgtagttgaagttcaactttaaggactactagtagttcttcttacgaagaatgtaaaacacgcatgatgacttaatcagtgtgccctcgtcgatcaaaacaaagtcccccaagttgtaaattctgacggagcttccttctcatctcatctcaccagaataatgcaacaaatcaataggacaacaccgctattcagatcctgtgtggaggactcaccgaatccggcggccggccggccgcgatgcagacgagggctccctccgccccatccgcccatcgaggatcgaccagatggacggacggaggaagaagaatggacgggcgcagaagaacaagatggagctccccccctcgtactcgcaggtagcgtgcctccattgccgtgggaattgggacgcggcggtgcgcgccgccgctcttcccctccccatcccctcgtcgtcgtcgggctccaggttgtcgatcttaggggacctaaagt
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| CDS seq | atggagggctccatgttcaacctcccaggaaggctcgaccggctcctgcgtcgtcatggcagcatgctgcccaagggggcagaggaggagatacctctcatcaagcaagatctcgaggaaataatctccgtcctccatggtcactgtagcaagccaaagctggaggaccatgccatggtggtcaggtgctggatgaaggaggtacgtgagctctcttatgacatcgaggattgcatcgaccagtatgagcatgccgccactgccacccggtcacatactggacctaatatttgtcgccgtaagttcaatcagcggcatggaaagatgatcccttgggttccctggaaacttaagcagcggttgtggatggccaacaagatcagagaattcagcctgcgcacccaggaggcgcttcaacgccacaccatgtacaacaaccttggtggcatcaccattgcttctactactggaggagatgtatgctctgcaacaccttggcatcccacgcagttcagagagcacaccgacaacgtctgttctgtcggtatagacgccgatggtatggaagctgccctgaatgacctgaacaagctcaaaaacttgctcgctagtatcccgactgcttctctcgtgcagttcagggagcacgccaataaagtgcgtcatatccaccccgatgtggaagccatcctgaacaagctcaaaaacatacccactggtatcaccactacttctactaccactagaggtgatgtatcttctacctcatctaggcaacccacgcggttcatggagtccgcgggtcttgttggcatcaacgccgcggtgaacaagcttgaaaacttgctcgatgtgtgcggagaggagaagctcaaggtggtgtccatcgtgggagttggaggagttggcaagactacgctcgccaacaagctgtactgcaagcttcagcggcagttcgagtgctgggcatttgtgcagacatctcagaagactgatatgaggaggcttctcatcaatatcctctcacaggttcagccgcaccagtcacctgacaattggaaggtgcatagcctaatttccagtatcaggacacatctgcaagataagaggtacttgatcataattgatggtttatgggctacatccacatgggatgttattaagtgcgctttgccggatggtaatagttccagcagaatactaaccacaacagaaattgaggatctagctttgcaatcttgtagttatgacttgaaatttattttcaagatgaaaccttttggtgagggtgactcaagaaaactatttttcagtatagtctttggctctcattctaagtgtcctccagaagtcagtgaaacattatatgatattgtaaggaaatgtggtggtttgccgctagctattgtcactgttgctagtcttttagcaagccagcttgagaaacaagaacaattggattatataaacaaatccttaggttacggtttgatggcaaatcctactttggaagggatgaaacaactactgaacatttgttacaacaatcttcctcagcatttgaaggtatgcatgttgtatcttagtatgtatcaagaagatcacataatttggaaagatgatttagtgagtcaatggatagctgaaggttttatctgtgcaactgaagggcatgacaaggaagaaatttcaagggcctattttgatgagcttgtgggcagaaaaatcatccagcctgtacatatcgatgacagtggtgaggttttgtcctgtgtagttcaccatatggtactcaatttcgttacatacaagtcaatagaagaaaattttattattgcaatagaccattcacaggcaactataagatttgctgacaaggttcgacgattatctatccactttagtaacgtagaagatgcaactccgcctaccagtatgagattgtcccaagttcggacagttgccttcttcggggtcttgaagtatatgcctttcgttatggagtttcgacttattaaagttctagttctacatattttgggtgatgaggatagcatcggcatttttgatctcactaaaatttcagaacttgttcgactgagatatttgaaggtcacctctaatgtcaccgtaaaactgccaacccagatgcaaggtctaccatatttggagacactgaaaatagatgggacaataagtgaagttccaacagacatttatttgccatgtttgctgcatcttactcttcctgctaagacaaacctgcccagtggaattgtccacatgacatcgcttcgtacaattggatattttgatctcagctgtaactcagcggagaatctatggagccttggtgagctgagcaatctccgggatttgcagctcacctattctgaaatacattctgacaatctgaaggataatatgaaatatcttggatccattctggggaaactccgtaatctcacatctataactttatcgcctcctggctcttcctgtccagatactctacatattgacaggacgaggatcaatgttgatggctggagcagtgtgtcctctccaccagcccttcttcagaggtttgagttgttaccatgtgtttgcatcttttctaacctcccaaattggattgggcagcttggaaacctctgcattttgaagattgggataagggaagtaacaagtaatagtattgatgttctaggagtattaccgaaactcactgttttgtcactttatgtccacacaaagcctgcagaaaggattgtctttgacaatgcagggttctcaatcctcaaatacttcgagtttatatgcagtgtagcatggatgaaatttgagatgggtgcaatgcctagtctaaggaagctcaagctaggttttgatgtccatatagcagatcagcatgatattattcctgttggcatcgaacatctgtctggacttgaagagatctctgcaaaaattagggtcgcctgtactgctcatgatcattgtagaagatttgcagagtcagctttgactaacgcctttatgatgcatccaggacgtcctagcgtcaacatacggtgtgtggattggacctttcatgataaggataatgactgtgtggggacacgagaggaagaatgtaggactccaatgaaacaggagcattttgtgaaagaagacttaagtgagaaatctgcagttctacaaaacgagcacgacgaagaagcacataaatttgttgacagaaggtatgaatttgtcacactaagaattcagcattgccaatttactaggaccaacaccctttttttagaaaaatggatatttcattaa
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| Protein seq | MEGSMFNLPGRLDRLLRRHGSMLPKGAEEEIPLIKQDLEEIISVLHGHCSKPKLEDHAMVVRCWMKEVRELSYDIEDCIDQYEHAATATRSHTGPNICRRKFNQRHGKMIPWVPWKLKQRLWMANKIREFSLRTQEALQRHTMYNNLGGITIASTTGGDVCSATPWHPTQFREHTDNVCSVGIDADGMEAALNDLNKLKNLLASIPTASLVQFREHANKVRHIHPDVEAILNKLKNIPTGITTTSTTTRGDVSSTSSRQPTRFMESAGLVGINAAVNKLENLLDVCGEEKLKVVSIVGVGGVGKTTLANKLYCKLQRQFECWAFVQTSQKTDMRRLLINILSQVQPHQSPDNWKVHSLISSIRTHLQDKRYLIIIDGLWATSTWDVIKCALPDGNSSSRILTTTEIEDLALQSCSYDLKFIFKMKPFGEGDSRKLFFSIVFGSHSKCPPEVSETLYDIVRKCGGLPLAIVTVASLLASQLEKQEQLDYINKSLGYGLMANPTLEGMKQLLNICYNNLPQHLKVCMLYLSMYQEDHIIWKDDLVSQWIAEGFICATEGHDKEEISRAYFDELVGRKIIQPVHIDDSGEVLSCVVHHMVLNFVTYKSIEENFIIAIDHSQATIRFADKVRRLSIHFSNVEDATPPTSMRLSQVRTVAFFGVLKYMPFVMEFRLIKVLVLHILGDEDSIGIFDLTKISELVRLRYLKVTSNVTVKLPTQMQGLPYLETLKIDGTISEVPTDIYLPCLLHLTLPAKTNLPSGIVHMTSLRTIGYFDLSCNSAENLWSLGELSNLRDLQLTYSEIHSDNLKDNMKYLGSILGKLRNLTSITLSPPGSSCPDTLHIDRTRINVDGWSSVSSPPALLQRFELLPCVCIFSNLPNWIGQLGNLCILKIGIREVTSNSIDVLGVLPKLTVLSLYVHTKPAERIVFDNAGFSILKYFEFICSVAWMKFEMGAMPSLRKLKLGFDVHIADQHDIIPVGIEHLSGLEEISAKIRVACTAHDHCRRFAESALTNAFMMHPGRPSVNIRCVDWTFHDKDNDCVGTREEECRTPMKQEHFVKEDLSEKSAVLQNEHDEEAHKFVDRRYEFVTLRIQHCQFTRTNTLFLEKWIFH |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:F7J0N2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0023750 | OsCMeo_11g0023750.01 | Chr11 | 27647470 | 27656469 | - | NAM | ||
| CDS seq | atggagggctccatgttcaacctcccaggaaggctcgaccggctcctgcgtcgtcatggcagcatgctgcccaagggggcagaggaggagatacctctcatcaagcaagatctcgaggaaataatctccgtcctccatggtcactgtagcaagccaaagctggaggaccatgccatggtggtcaggtgctggatgaaggaggtacgtgagctctcttatgacatcgaggattgcatcgaccagtatgagcatgccgccactgccacccggtcacatactggacctaatatttgtcgccgtaagttcaatcagcggcatggaaagatgatcccttgggttccctggaaacttaagcagcggttgtggatggccaacaagatcagagaattcagcctgcgcacccaggaggcgcttcaacgccacaccatgtacaacaaccttggtggcatcaccattgcttctactactggaggagatgtatgctctgcaacaccttggcatcccacgcagttcagagagcacaccgacaacgtctgttctgtcggtatagacgccgatggtatggaagctgccctgaatgacctgaacaagctcaaaaacttgctcgctagtatcccgactgcttctctcgtgcagttcagggagcacgccaataaagtgcgtcatatccaccccgatgtggaagccatcctgaacaagctcaaaaacatacccactggtatcaccactacttctactaccactagaggtgatgtatcttctacctcatctaggcaacccacgcggttcatggagtccgcgggtcttgttggcatcaacgccgcggtgaacaagcttgaaaacttgctcgatgtgtgcggagaggagaagctcaaggtggtgtccatcgtgggagttggaggagttggcaagactacgctcgccaacaagctgtactgcaagcttcagcggcagttcgagtgctgggcatttgtgcagacatctcagaagactgatatgaggaggcttctcatcaatatcctctcacaggttcagccgcaccagtcacctgacaattggaaggtgcatagcctaatttccagtatcaggacacatctgcaagataagaggtacttgatcataattgatggtttatgggctacatccacatgggatgttattaagtgcgctttgccggatggtaatagttccagcagaatactaaccacaacagaaattgaggatctagctttgcaatcttgtagttatgacttgaaatttattttcaagatgaaaccttttggtgagggtgactcaagaaaactatttttcagtatagtctttggctctcattctaagtgtcctccagaagtcagtgaaacattatatgatattgtaaggaaatgtggtggtttgccgctagctattgtcactgttgctagtcttttagcaagccagcttgagaaacaagaacaattggattatataaacaaatccttaggttacggtttgatggcaaatcctactttggaagggatgaaacaactactgaacatttgttacaacaatcttcctcagcatttgaaggtatgcatgttgtatcttagtatgtatcaagaagatcacataatttggaaagatgatttagtgagtcaatggatagctgaaggttttatctgtgcaactgaagggcatgacaaggaagaaatttcaagggcctattttgatgagcttgtgggcagaaaaatcatccagcctgtacatatcgatgacagtggtgaggttttgtcctgtgtagttcaccatatggtactcaatttcgttacatacaagtcaatagaagaaaattttattattgcaatagaccattcacaggcaactataagatttgctgacaaggttcgacgattatctatccactttagtaacgtagaagatgcaactccgcctaccagtatgagattgtcccaagttcggacagttgccttcttcggggtcttgaagtatatgcctttcgttatggagtttcgacttattaaagttctagttctacatattttgggtgatgaggatagcatcggcatttttgatctcactaaaatttcagaacttgttcgactgagatatttgaaggtcacctctaatgtcaccgtaaaactgccaacccagatgcaaggtctaccatatttggagacactgaaaatagatgggacaataagtgaagttccaacagacatttatttgccatgtttgctgcatcttactcttcctgctaagacaaacctgcccagtggaattgtccacatgacatcgcttcgtacaattggatattttgatctcagctgtaactcagcggagaatctatggagccttggtgagctgagcaatctccgggatttgcagctcacctattctgaaatacattctgacaatctgaaggataatatgaaatatcttggatccattctggggaaactccgtaatctcacatctataactttatcgcctcctggctcttcctgtccagatactctacatattgacaggacgaggatcaatgttgatggctggagcagtgtgtcctctccaccagcccttcttcagaggtttgagttgttaccatgtgtttgcatcttttctaacctcccaaattggattgggcagcttggaaacctctgcattttgaagattgggataagggaagtaacaagtaatagtattgatgttctaggagtattaccgaaactcactgttttgtcactttatgtccacacaaagcctgcagaaaggattgtctttgacaatgcagggttctcaatcctcaaatacttcgagtttatatgcagtgtagcatggatgaaatttgagatgggtgcaatgcctagtctaaggaagctcaagctaggttttgatgtccatatagcagatcagcatgatattattcctgttggcatcgaacatctgtctggacttgaagagatctctgcaaaaattagggtcgcctgtactgctcatgatcattgtagaagatttgcagagtcagctttgactaacgcctttatgatgcatccaggacgtcctagcgtcaacatacggtgtgtggattggacctttcatgataaggataatgactgtgtggggacacgagaggaagaatgtaggactccaatgaaacaggagcattttgtgaaagaagacttaagtgagaaatctgcagttctacaaaacgagcacgacgaagaagcacataaatttgttgacagaaggtatgaatttgtcacactaagaattcagcattgccaatttactaggaccaacaccctttttttagaaaaatggatatttcattaa
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| Protein seq | MEGSMFNLPGRLDRLLRRHGSMLPKGAEEEIPLIKQDLEEIISVLHGHCSKPKLEDHAMVVRCWMKEVRELSYDIEDCIDQYEHAATATRSHTGPNICRRKFNQRHGKMIPWVPWKLKQRLWMANKIREFSLRTQEALQRHTMYNNLGGITIASTTGGDVCSATPWHPTQFREHTDNVCSVGIDADGMEAALNDLNKLKNLLASIPTASLVQFREHANKVRHIHPDVEAILNKLKNIPTGITTTSTTTRGDVSSTSSRQPTRFMESAGLVGINAAVNKLENLLDVCGEEKLKVVSIVGVGGVGKTTLANKLYCKLQRQFECWAFVQTSQKTDMRRLLINILSQVQPHQSPDNWKVHSLISSIRTHLQDKRYLIIIDGLWATSTWDVIKCALPDGNSSSRILTTTEIEDLALQSCSYDLKFIFKMKPFGEGDSRKLFFSIVFGSHSKCPPEVSETLYDIVRKCGGLPLAIVTVASLLASQLEKQEQLDYINKSLGYGLMANPTLEGMKQLLNICYNNLPQHLKVCMLYLSMYQEDHIIWKDDLVSQWIAEGFICATEGHDKEEISRAYFDELVGRKIIQPVHIDDSGEVLSCVVHHMVLNFVTYKSIEENFIIAIDHSQATIRFADKVRRLSIHFSNVEDATPPTSMRLSQVRTVAFFGVLKYMPFVMEFRLIKVLVLHILGDEDSIGIFDLTKISELVRLRYLKVTSNVTVKLPTQMQGLPYLETLKIDGTISEVPTDIYLPCLLHLTLPAKTNLPSGIVHMTSLRTIGYFDLSCNSAENLWSLGELSNLRDLQLTYSEIHSDNLKDNMKYLGSILGKLRNLTSITLSPPGSSCPDTLHIDRTRINVDGWSSVSSPPALLQRFELLPCVCIFSNLPNWIGQLGNLCILKIGIREVTSNSIDVLGVLPKLTVLSLYVHTKPAERIVFDNAGFSILKYFEFICSVAWMKFEMGAMPSLRKLKLGFDVHIADQHDIIPVGIEHLSGLEEISAKIRVACTAHDHCRRFAESALTNAFMMHPGRPSVNIRCVDWTFHDKDNDCVGTREEECRTPMKQEHFVKEDLSEKSAVLQNEHDEEAHKFVDRRYEFVTLRIQHCQFTRTNTLFLEKWIFH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0023750 | OsCMeo_11g0023750.02 | Chr11 | 27647470 | 27651670 | - | NAM | ||
| CDS seq | atggagggctccatgttcaacctcccaggaaggctcgaccggctcctgcgtcgtcatggcagcatgctgcccaagggggcagaggaggagatacctctcatcaagcaagatctcgaggaaataatctccgtcctccatggtcactgtagcaagccaaagctggaggaccatgccatggtggtcaggtgctggatgaaggaggtacgtgagctctcttatgacatcgaggattgcatcgaccagtatgagcatgccgccactgccacccggtcacatactggacctaatatttgtcgccgtaagttcaatcagcggcatggaaagatgatcccttgggttccctggaaacttaagcagcggttgtggatggccaacaagatcagagaattcagcctgcgcacccaggaggcgcttcaacgccacaccatgtacaacaaccttggtggcatcaccattgcttctactactggaggagatgtatgctctgcaacaccttggcatcccacgcagttcagagagcacaccgacaacgtctgttctgtcggtatagacgccgatggtatggaagctgccctgaatgacctgaacaagctcaaaaacttgctcgctagtatcccgactgcttctctcgtgcagttcagggagcacgccaataaagtgcgtcatatccaccccgatgtggaagccatcctgaacaagctcaaaaacatacccactggtatcaccactacttctactaccactagaggtgatgtatcttctacctcatctaggcaacccacgcggttcatggagtccgcgggtcttgttggcatcaacgccgcggtgaacaagcttgaaaacttgctcgatgtgtgcggagaggagaagctcaaggtggtgtccatcgtgggagttggaggagttggcaagactacgctcgccaacaagctgtactgcaagcttcagcggcagttcgagtgctgggcatttgtgcagacatctcagaagactgatatgaggaggcttctcatcaatatcctctcacaggttcagccgcaccagtcacctgacaattggaaggtgcatagcctaatttccagtatcaggacacatctgcaagataagaggtacttgatcataattgatggtttatgggctacatccacatgggatgttattaagtgcgctttgccggatggtaatagttccagcagaatactaaccacaacagaaattgaggatctagctttgcaatcttgtagttatgacttgaaatttattttcaagatgaaaccttttggtgagggtgactcaagaaaactatttttcagtatagtctttggctctcattctaagtgtcctccagaagtcagtgaaacattatatgatattgtaaggaaatgtggtggtttgccgctagctattgtcactgttgctagtcttttagcaagccagcttgagaaacaagaacaattggattatataaacaaatccttaggttacggtttgatggcaaatcctactttggaagggatgaaacaactactgaacatttgttacaacaatcttcctcagcatttgaaggtatgcatgttgtatcttagtatgtatcaagaagatcacataatttggaaagatgatttagtgagtcaatggatagctgaaggttttatctgtgcaactgaagggcatgacaaggaagaaatttcaagggcctattttgatgagcttgtgggcagaaaaatcatccagcctgtacatatcgatgacagtggtgaggttttgtcctgtgtagttcaccatatggtactcaatttcgttacatacaagtcaatagaagaaaattttattattgcaatagaccattcacaggcaactataagatttgctgacaaggttcgacgattatctatccactttagtaacgtagaagatgcaactccgcctaccagtatgagattgtcccaagttcggacagttgccttcttcggggtcttgaagtatatgcctttcgttatggagtttcgacttattaaagttctagttctacatattttgggtgatgaggatagcatcggcatttttgatctcactaaaatttcagaacttgttcgactgagatatttgaaggtcacctctaatgtcaccgtaaaactgccaacccagatgcaaggtctaccatatttggagacactgaaaatagatgggacaataagtgaagttccaacagacatttatttgccatgtttgctgcatcttactcttcctgctaagacaaacctgcccagtggaattgtccacatgacatcgcttcgtacaattggatattttgatctcagctgtaactcagcggagaatctatggagccttggtgagctgagcaatctccgggatttgcagctcacctattctgaaatacattctgacaatctgaaggataatatgaaatatcttggatccattctggggaaactccgtaatctcacatctataactttatcgcctcctggctcttcctgtccagatactctacatattgacaggacgaggatcaatgttgatggctggagcagtgtgtcctctccaccagcccttcttcagaggtttgagttgttaccatgtgtttgcatcttttctaacctcccaaattggattgggcagcttggaaacctctgcattttgaagattgggataagggaagtaacaagtaatagtattgatgttctaggagtattaccgaaactcactgttttgtcactttatgtccacacaaagcctgcagaaaggattgtctttgacaatgcagggttctcaatcctcaaatacttcgagtttatatgcagtgtagcatggatgaaatttgagatgggtgcaatgcctagtctaaggaagctcaagctaggttttgatgtccatatagcagatcagcatgatattattcctgttggcatcgaacatctgtctggacttgaagagatctctgcaaaaattagggtcgcctgtactgctcatgatcattgtagaagatttgcagagtcagctttgactaacgcctttatgatgcatccaggacgtcctagcgtcaacatacggtgtgtggattggacctttcatgataaggataatgactgtgtggggacacgagaggaagaatgtaggactccaatgaaacaggagcattttgtgaaagaagacttaagtgagaaatctgcagttctacaaaacgagcacgacgaagaagcacataaatttgttgacagaaggtatgaatttgtcacactaagaattcagcattgccaatttactaggaccaacaccctttttttagaaaaatggatatttcattaa
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| Protein seq | MEGSMFNLPGRLDRLLRRHGSMLPKGAEEEIPLIKQDLEEIISVLHGHCSKPKLEDHAMVVRCWMKEVRELSYDIEDCIDQYEHAATATRSHTGPNICRRKFNQRHGKMIPWVPWKLKQRLWMANKIREFSLRTQEALQRHTMYNNLGGITIASTTGGDVCSATPWHPTQFREHTDNVCSVGIDADGMEAALNDLNKLKNLLASIPTASLVQFREHANKVRHIHPDVEAILNKLKNIPTGITTTSTTTRGDVSSTSSRQPTRFMESAGLVGINAAVNKLENLLDVCGEEKLKVVSIVGVGGVGKTTLANKLYCKLQRQFECWAFVQTSQKTDMRRLLINILSQVQPHQSPDNWKVHSLISSIRTHLQDKRYLIIIDGLWATSTWDVIKCALPDGNSSSRILTTTEIEDLALQSCSYDLKFIFKMKPFGEGDSRKLFFSIVFGSHSKCPPEVSETLYDIVRKCGGLPLAIVTVASLLASQLEKQEQLDYINKSLGYGLMANPTLEGMKQLLNICYNNLPQHLKVCMLYLSMYQEDHIIWKDDLVSQWIAEGFICATEGHDKEEISRAYFDELVGRKIIQPVHIDDSGEVLSCVVHHMVLNFVTYKSIEENFIIAIDHSQATIRFADKVRRLSIHFSNVEDATPPTSMRLSQVRTVAFFGVLKYMPFVMEFRLIKVLVLHILGDEDSIGIFDLTKISELVRLRYLKVTSNVTVKLPTQMQGLPYLETLKIDGTISEVPTDIYLPCLLHLTLPAKTNLPSGIVHMTSLRTIGYFDLSCNSAENLWSLGELSNLRDLQLTYSEIHSDNLKDNMKYLGSILGKLRNLTSITLSPPGSSCPDTLHIDRTRINVDGWSSVSSPPALLQRFELLPCVCIFSNLPNWIGQLGNLCILKIGIREVTSNSIDVLGVLPKLTVLSLYVHTKPAERIVFDNAGFSILKYFEFICSVAWMKFEMGAMPSLRKLKLGFDVHIADQHDIIPVGIEHLSGLEEISAKIRVACTAHDHCRRFAESALTNAFMMHPGRPSVNIRCVDWTFHDKDNDCVGTREEECRTPMKQEHFVKEDLSEKSAVLQNEHDEEAHKFVDRRYEFVTLRIQHCQFTRTNTLFLEKWIFH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr11 | 27651445 | 27651581 | - | OsCMeo_11g0023750.02 | OsCMeo_11g0023750.01,OsCMeo_11g0023750.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.966452 | 2.168166 | 3.543668 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0684100 | RBH | 3.183960 | 2.189007 | 2.015002 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45750 | RBH | 2.154246 | 1.370123 | 0.517376 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0684100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024250 | RBH | 0.858141 | 0.000000 | 1.780773 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024210 | RBH | 0.198599 | 2.936731 | 2.884382 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023820 | RBH | 0.0 | 2.615624 | 1.016197 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023600 | SBH | 0.021435 | 0.193460 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024060 | RBH | 5.791612 | 0.0 | 11.852215 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0437900 | SBH | 0.023882 | 1.4003845 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024450 | RBH | 0.156799 | 0.040792 | 0.934761 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0436000 | RBH | 3.5425875 | 3.616399 | 5.6041285 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024280 | RBH | 0.232568 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024310 | RBH | 0.874429 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023740 | SBH | 2.832259 | 19.498186 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023590 | RBH | 1.869972 | 0.0 | 2.139541 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0023970 | RBH | 0.182915 | 0.802238 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023960 | RBH | 0.599942 | 0.867437 | 1.404776 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024170 | RBH | 1.211280 | 7.063657 | 4.711861 |
