Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKYG_06g0012740 OGI:06032740 | 16/16 KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) Chr06:11343181-11346279
Gene Symbol -
DNA seq

CGGAGAAAAAGGGGATGGTTAGGGGAGTTATTGATTGATGATTTGTAATGTAACAGTATCATTCAATTCTTCAAAAGGGAATGCTACAGAGCACTAAAATGTGATACCGTGGCCCAAAAAACAATATCCAAGTCCTAAAACGAAAAATGGATATCCTTGGTCAGTAAATCTCAACTCCCGTGTCAAAACTTGCTACCTTCACTACGGATATGGATACTTTGTGATCCAGAAACCAACCTAAATCAAGAAAAGACAAGAAAAATAAGATTATAACATAAATAATGAATTTTATGAGCGATGATAATGACCATTATGAAAGCATACCTCCAAAGTATGTACCTCTGAATACTTCCTGGTCATCTATGTCTTTCCACAGCAACAACTCTGTTTTCCATGACATGCTATTAGTTAATATAGCTTTCTAAGAGAGTAAAAACAGTGGCAAAAACTTTGAGAATATAGTAACGTACCAAAACCCAAGAGATGACCTGTCCCGATGTTACTACAACTGCAATTATCTCGTAGGTCCTAACCAATTGCCATGCAAACCCTGGGTCGGCCGGAGCTGGAGGTGCAGAGTGCCCAGTCATCTCCAGTGTAGGATCAAGTGCCATTCGATACAGGCAGTACAAGACAAACAGTGAAAAAAGCATGAAGCCTACTCGTGCAACACTCTCCACAGCAAGTCTGCCACTTGTTTGAGCCAAAAAGAGCACAAGGCAGAGCAATGCAGCAGCAACCCACTACAATGCTAAATGCTATCACTATTGTGCTGAGATACTCATAGGGGAGCCAAGGTAGGAATGGGAACAGAAGGGTCAGTCCAGATATCAGTACGGCAAGAATCACGATCTGGACCTTATCCCAGCGAGAGTCGTCCTACAAGAATTATAAAGAGTTACTGAGCAAAATTGAATTAGCATGGGTAACTCCGTGCTAATCATTTAAATCACTTATCCACCCTAAGCAGCCCACAATTAAAGGTGGGGAAAAAAGAGTACTCCAACTTACCACCAAGGAGGTAAAAGTGGTGGATTAATCTGAACCATTCATTATTTAGGTGCATGGGGTCAAATTATCAACATGCAAGAGGTTAGCCGGTTGACTTTTCATGTGCAATGTAGAAGGTTCATCTAATTCCCTGCAATTCTAGCTTATGTAAAAGAAAATATATTGCTCAGGACCATGTTACACGCACAAAACATTCTGGAAGTTGATGGTCCTATGTGCTATGGGATTTACATTTCAAGCATTCATTTTGAATCATATGGGACAATGTATAACTATGCTATAAGCATGCATACTGATATTAGATATATTTTTTTATAGAAACACGATTTCATGGATAATGCAGAAATTTCTTCATAAAAGAGAAATTCAAAAGTCTTGGAAAAAATTTGTAATACCTTCTTTTCCTCGGGTGCCAAAAGTGATTTGTGCAATCCTTGCACTGATTCCTCTCGCATCTCAATCATCTTTTCACGTCTCTTTAAAGCATGTTCTTGACGCCGTAGCTGAGCAGCCTTCAGGCGGAGGTTACCTAAGTCACTAGCGTGCTGTGCTGACAGTTCTATTGAACCTTCAAAAAATAACCAAACTTAGTAAGGTACACCCTGTTTTATTCTGTGGTACATATATATGGTATAGGAACATTTCTAGCTTCTAATGTCATTCAACGTACAGTGATACAGGCTTGGAAGAATTATGTCTAATTTTTGCATATGGTATAGGAACATTTCTACCTGCGTGAAGTGACGGAGGTAGCTTCCAAAGCTGTACTTGGCGCCAAGAGAGTGGCTGCAGCGAGCGGGAGCGAACAATTGGCTGCAAAAGCTGGTAATGTTCATCGACAAAGTGAATAACCATCTTCTTGTACAGATTGACGCCAAACAGGTGATGCTCCAGAAAGAAGTAAACCAAATCAGGGTTGCTGGGGTGTATGCCTGCAAGGATTGGGACCTGGTTGGGCAAACCCGTTGCCTTGTAGGTCTCATTCTCCCAAATGTCCCCAAGAAATGCCATGCAATTGGTCTTCCAATACGACATGCTTCTCGGACCGCAGATCAGCACCCAAACAACAACAGTAGTTGACTCAACTGGAGCATTGTGTACACGGGTTATCTCCACGTAGCGCAATCTCTCTTTGCTAACCCTGACACAGCGATCAGCCTCAATATCACGCTGTGATTTGTTTTGGTCTTCTATCGGGATATGCTCTGGGAGCTGGTGAAACTGCAGAACAGGATGATCACTGAACGGGTTGCAGCTGATGAGACCCCTCCACAGATTAACAAACCAAAGGTTCCCATCGAACGAAATGACATCATCGTTGTGCCACCCCCAGTGCAAATTACTTCGTCCGGGCATGTCAGGGCGGATGAGACGACTCACTGCCCAAGCGGGAGTTCCAGAACGGAAGACAATCAGCTTGGCGAGTTCGGCGCCGGCCTCGATCTGCAACTCAGCGATGGCGTAGTCCTTGCCGCCGGTTCCAGGGGAGGTGAGGAAGCCGACGTTCTTGAGGTTGGAGATGTGGGGCACGGATCCGCCGACTCGCTCCGGGACACGCTCGGCGATTCCGGTGGCCTCGTGGGGGTTGCTGGCCCCGACGGGGAGGAATTCGCGAAGCACGGCGAAGCTACCGGGTGGGTCGTCGTCGAGGTTGAGGCCGCAGGAGGGGCTCGCCGCGGTGTGGACGAGGAGGCCGAAGGGGTCGGCGGCGGCGACGTACGGTAGCTCGTCCGGGTTGCTCGGGAGAGCGTGGAACTTGGCCGGCACGGTGAGCGTCGACAGACGCGGCGGCTCGGCGACGTTGAGGGCGACCTCCCGCGGATCTTCCTCGTCGTCCACGCACGCGACGCGATCGAGTATGACCCACCCCCGCGCCAGCTCCTCCGCCGCAGACGAGCTCCCCTCCTCCATTCCGCACCACCACCGGCACCGGCGGACACCGGCGAGGTGGCGAGACGGAGAGGAAGAGGACGAAGATTGGGAGATGGGAGAGGAAGAGGGGTTTGGGTTTGAGTTTTTTTTTTTTTTTTGAGAGGAGTTTCGTTTTTTCTTTTTTGATTGATGATACGGAGAGGAAGATTATTGGGT

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CDS seq

ATGGAGGAGGGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCGTGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGTCTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTACCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCCTGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTCCCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGAGTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCTGGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTCGCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGCCCTGACATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCGTTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTCAGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAAAACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTGCGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTTTGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTTCTTGGGGACATTTGGGAGAATGAGACCTACAAGGCAACGGGTTTGCCCAACCAGGTCCCAATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCACCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCAGCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCGCCAAGTACAGCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGCTAGTGACTTAGGTAACCTCCGCCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTTAAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAATCACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGATTCTTGCCGTACTGATATCTGGACTGACCCTTCTGTTCCCATTCCTACCTTGGCTCCCCTATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTGCTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGTGTTGCACGAGTAGGCTTCATGCTTTTTTCACTGTTTGTCTTGTACTGCCTGTATCGAATGGCACTTGA

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Protein seq

MEEGSSSAAEELARGWVILDRVACVDDEEDPREVALNVAEPPRLSTLTVPAKFHALPSNPDELPYVAAADPFGLLVHTAASPSCGLNLDDDPPGSFAVLREFLPVGASNPHEATGIAERVPERVGGSVPHISNLKNVGFLTSPGTGGKDYAIAELQIEAGAELAKLIVFRSGTPAWAVSRLIRPDMPGRSNLHWGWHNDDVISFDGNLWFVNLWRGLISCNPFSDHPVLQFHQLPEHIPIEDQNKSQRDIEADRCVRVSKERLRYVEITRVHNAPVESTTVVVWVLICGPRSMSYWKTNCMAFLGDIWENETYKATGLPNQVPILAGIHPSNPDLVYFFLEHHLFGVNLYKKMVIHFVDEHYQLLQPIVRSRSLQPLSWRQVQLWKLPPSLHAGSIELSAQHASDLGNLRLKAAQLRRQEHALKRREKMIEMREESVQGLHKSLLAPEEKKDDSRWDKVQIVILAVLISGLTLLFPFLPWLPYEYLSTIVIAFSIVVGCCCIALPCALFGSNKWQTCCGECCTSRLHAFFTVCLVLPVSNGT

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKYG_06g0012740 OsKYG_06g0012740.02 Chr06 11343197 11346279 - NAM
CDS seq

ATGGAGGAGGGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCGTGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGTCTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTACCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCCTGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTCCCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGAGTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCTGGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTCGCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGCCCTGACATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCGTTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTCAGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAAAACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTGCGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTTTGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTTCTTGGGGACATTTGGGAGAATGAGACCTACAAGGCAACGGGTTTGCCCAACCAGGTCCCAATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCACCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCAGCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCGCCAAGTACAGCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGCTAGTGACTTAGGTAACCTCCGCCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTTAAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAATCACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGATTCTTGCCGTACTGATATCTGGACTGACCCTTCTGTTCCCATTCCTACCTTGGCTCCCCTATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTGCTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGTGTTGCACGAGTAGGCTTCATGCTTTTTTCACTGTTTGTCTTGTACTGCCTGTATCGAATGGCACTTGA

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Protein seq

MEEGSSSAAEELARGWVILDRVACVDDEEDPREVALNVAEPPRLSTLTVPAKFHALPSNPDELPYVAAADPFGLLVHTAASPSCGLNLDDDPPGSFAVLREFLPVGASNPHEATGIAERVPERVGGSVPHISNLKNVGFLTSPGTGGKDYAIAELQIEAGAELAKLIVFRSGTPAWAVSRLIRPDMPGRSNLHWGWHNDDVISFDGNLWFVNLWRGLISCNPFSDHPVLQFHQLPEHIPIEDQNKSQRDIEADRCVRVSKERLRYVEITRVHNAPVESTTVVVWVLICGPRSMSYWKTNCMAFLGDIWENETYKATGLPNQVPILAGIHPSNPDLVYFFLEHHLFGVNLYKKMVIHFVDEHYQLLQPIVRSRSLQPLSWRQVQLWKLPPSLHAGSIELSAQHASDLGNLRLKAAQLRRQEHALKRREKMIEMREESVQGLHKSLLAPEEKKDDSRWDKVQIVILAVLISGLTLLFPFLPWLPYEYLSTIVIAFSIVVGCCCIALPCALFGSNKWQTCCGECCTSRLHAFFTVCLVLPVSNGT

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Gene Transcript Chromosome Start End Strand Source
OsKYG_06g0012740 OsKYG_06g0012740.01 Chr06 11343181 11346279 - NAM
CDS seq

ATGGAGGAGGGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCGTGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGTCTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTACCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCCTGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTCCCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGAGTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCTGGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTCGCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGCCCTGACATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCGTTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTCAGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAAAACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTGCGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTTTGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTTCTTGGGGACATTTGGGAGAATGAGACCTACAAGGCAACGGGTTTGCCCAACCAGGTCCCAATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCACCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCAGCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCGCCAAGTACAGCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGCTAGTGACTTAGGTAACCTCCGCCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTTAAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAATCACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGATTCTTGCCGTACTGATATCTGGACTGACCCTTCTGTTCCCATTCCTACCTTGGCTCCCCTATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTGCTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGTGTTGCACGAGTAGGCTTCATGCTTTTTTCACTGTTTGTCTTGTACTGCCTGTATCGAATGGCACTTGA

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Protein seq

MEEGSSSAAEELARGWVILDRVACVDDEEDPREVALNVAEPPRLSTLTVPAKFHALPSNPDELPYVAAADPFGLLVHTAASPSCGLNLDDDPPGSFAVLREFLPVGASNPHEATGIAERVPERVGGSVPHISNLKNVGFLTSPGTGGKDYAIAELQIEAGAELAKLIVFRSGTPAWAVSRLIRPDMPGRSNLHWGWHNDDVISFDGNLWFVNLWRGLISCNPFSDHPVLQFHQLPEHIPIEDQNKSQRDIEADRCVRVSKERLRYVEITRVHNAPVESTTVVVWVLICGPRSMSYWKTNCMAFLGDIWENETYKATGLPNQVPILAGIHPSNPDLVYFFLEHHLFGVNLYKKMVIHFVDEHYQLLQPIVRSRSLQPLSWRQVQLWKLPPSLHAGSIELSAQHASDLGNLRLKAAQLRRQEHALKRREKMIEMREESVQGLHKSLLAPEEKKDDSRWDKVQIVILAVLISGLTLLFPFLPWLPYEYLSTIVIAFSIVVGCCCIALPCALFGSNKWQTCCGECCTSRLHAFFTVCLVLPVSNGT

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A5 Chr06 11343564 11343669 - OsKYG_06g0012740.01 OsKYG_06g0012740.01,OsKYG_06g0012740.02 All

Expression

Leaf Root Panicle
FPKM 0.134874 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0307900 RBH 0.259176 0.0 0.854394
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g20310 RBH 0.165710 0.0 0.229624
Nipponbare | IRGSP 1.0 | RAP-db Os06g0307900 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0012790 RBH 0.169621 0.0 2.269566
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0012620 RBH 0.0 0.0 0.312114
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0012690 RBH 0.000000 0.0 1.002098
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0012740 RBH 0.033528 0.043947 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0012870 RBH 0.0 0.0 1.078435
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0190200 RBH 0.4035725 0.033049 4.903389
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0012330 RBH 0.0 0.0 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0186500 RBH 0.156241 0.0269225 4.8424675
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0012870 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0012530 RBH 1.404725 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0013010 RBH 0.000000 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0012620 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G012490 RBH 0.166395 0.943951 1.448440
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0012810 RBH 0.0 0.000000 0.845358
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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