Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_05g0004990 | OGI:08000190 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr05:4161566-4162762 | ||||||||
| Gene Symbol | GA2OX10, OsGA2ox10 | ||||||||||
| DNA seq | CTAGGACTGAAGTTCGCCAATGCATAGACCAATGACAATATCCTTGCACGAAGAGGTTTCTCCAAAACGGTGCCCCCAAGGAGGATGCAACGTGGATCGCCACCACCGCTCGTTTGGAACCGAAGCAAGGTTTTCACCCGGAGAATATGGTAGGGAAAGGAAAGGGGTATGCTAAAACAACACCTCCAAGGAGGGGAACGACACCAAAAGGCGTCACCGTTGTCAGCCGGCCAAATGGCTCGGCAATGCTTTCACCCACGATTCCCAGTCCAAACCCACACCACCAATCCGCACAAGAAGTATCGTCGTCGATCAACAACATTGTCCCTTTAGCGATTCGGCCAAGGCCACCACCCACAATTGTTCCCGCCGTCAACGGCACGCCCGCACCCGGACTCCTTCCCCGCCGCTAGACCCCTTCCCCACCTCCACATACCGCTGCCGATGACGACGCACCGTCAGCCGGATGATGGCCTTCAACCATCGCCGCCATAGGTACCGTCGTTGACAGCCGCCACCGCCACTGCCACAGCCACCACCATCGCCAGCCGCCACCGTCAGCCACCATCGCCACCGCCACCGCCACCGCCACAGACACCCTCGTCCAGCCACCACCGTCCAGCCGCCACCGTCAGCCGCCACCGTCGCTAGCCAGCGCCGCCATACGCCAGCCGTCCAGATCCGGCCGGGTTGGCGTGGATTGGAGGTGCAGCGCGAAGCGTAGGTCGCCGGCATCATGGAGGAAGGCGACACGGGCATGGCGTTCACAGCCGGAGCATTGACGAGGGCGCCGCGCCTCCCTCGTGGCGGCGAGGTTCTTGACGAGGGCCGCCGTCGCGGCACGCGTCGCAGTCCGGCGCCGTCGTCGCCAACTTCGTCGCCGCCACATCCGCCACCATCACCGCCGCTAGCCACCCCCCCTGCCAGGTCCGCGGAGCGGCGCCGGCGTCGACCGAGCCCGTCGCCGATCACCCCGGCCAAGCGGGGAGACCAGATCTGGCAGCGCCGTCGCCCGTCGCTGGAGCCGCGGAGAGCCGACACCGTGGAGCACCCCACCGCCGCGCCCAACGCCGCGCCGTCGCCGCGCCGTCCCCGTTGCCACGACCTCGCCGTCTCACCGCCCTCGTCGCCACGCCCGCGCCGGGGCGAGGTAATATGAGAGAAAATTTTATAAGAAAAAAAAGTAATGTATAACAT
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| CDS seq | ATGTTATACATTACTTTTTTTTCTTATAAAATTTTCTCTCATATTACCTCGCCCCGGCGCGGGCGTGGCGACGAGGGCGGTGAGACGGCGAGGTCGTGGCAACGGGGACGGCGCGGCGACGGCGCGGCGTTGGGCGCGGCGGTGGGGTGCTCCACGGTGTCGGCTCTCCGCGGCTCCAGCGACGGGCGACGGCGCTGCCAGATCTGGTCTCCCCGCTTGGCCGGGGTGATCGGCGACGGGCTCGGTCGACGCCGGCGCCGCTCCGCGGACCTGGCAGGGGGGGTGGCTAGCGGCGGTGATGGTGGCGGATGTGGCGGCGACGAAGTTGGCGACGACGGCGCCGGACTGCGACGCGTGCCGCGACGGCGGCCCTCGTCAAGAACCTCGCCGCCACGAGGGAGGCGCGGCGCCCTCGTCAATGCTCCGGCTGTGAACGCCATGCCCGTGAGTCCGGGTGCGGGCGTGCCGTTGACGGCGGGAACAATTGTGGGTGGTGGCCTTGGCCGAATCGCTAAAGGGACAATGTTGTTGATCGACGACGATACTTCTTGTGCGGATTGGTGGTGTGGGTTTGGACTGGGAATCGTGGGTGAAAGCATTGCCGAGCCATTTGGCCGGCTGACAACGGTGACGCCTTTTGGTGTCGTTCCCCTCCTTGGAGGTGTTCATACCCCTTTCCTTTCCCTACCATATTCTCCGGGTGAAAACCTTGCTTCGGTTCCAAACGAGCGGTGGTGGCGATCCACGTTGCATCCTCCTTGGGGGCACCGTTTTGGAGAAACCTCTTCGTGCAAGGATATTGTCATTGGTCTATGCATTGGCGAACTTCAGTCCTAG
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| Protein seq | MLYITFFSYKIFSHITSPRRGRGDEGGETARSWQRGRRGDGAALGAAVGCSTVSALRGSSDGRRRCQIWSPRLAGVIGDGLGRRRRRSADLAGGVASGGDGGGCGGDEVGDDGAGLRRVPRRRPSSRTSPPRGRRGALVNAPAVNAMPVSPGAGVPLTAGTIVGGGLGRIAKGTMLLIDDDTSCADWWCGFGLGIVGESIAEPFGRLTTVTPFGVVPLLGGVHTPFLSLPYSPGENLASVPNERWWRSTLHPPWGHRFGETSSCKDIVIGLCIGELQS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_05g0004990 | OsKYG_05g0004990.01 | Chr05 | 4161566 | 4162762 | - | NAM | ||
| CDS seq | ATGTTATACATTACTTTTTTTTCTTATAAAATTTTCTCTCATATTACCTCGCCCCGGCGCGGGCGTGGCGACGAGGGCGGTGAGACGGCGAGGTCGTGGCAACGGGGACGGCGCGGCGACGGCGCGGCGTTGGGCGCGGCGGTGGGGTGCTCCACGGTGTCGGCTCTCCGCGGCTCCAGCGACGGGCGACGGCGCTGCCAGATCTGGTCTCCCCGCTTGGCCGGGGTGATCGGCGACGGGCTCGGTCGACGCCGGCGCCGCTCCGCGGACCTGGCAGGGGGGGTGGCTAGCGGCGGTGATGGTGGCGGATGTGGCGGCGACGAAGTTGGCGACGACGGCGCCGGACTGCGACGCGTGCCGCGACGGCGGCCCTCGTCAAGAACCTCGCCGCCACGAGGGAGGCGCGGCGCCCTCGTCAATGCTCCGGCTGTGAACGCCATGCCCGTGAGTCCGGGTGCGGGCGTGCCGTTGACGGCGGGAACAATTGTGGGTGGTGGCCTTGGCCGAATCGCTAAAGGGACAATGTTGTTGATCGACGACGATACTTCTTGTGCGGATTGGTGGTGTGGGTTTGGACTGGGAATCGTGGGTGAAAGCATTGCCGAGCCATTTGGCCGGCTGACAACGGTGACGCCTTTTGGTGTCGTTCCCCTCCTTGGAGGTGTTCATACCCCTTTCCTTTCCCTACCATATTCTCCGGGTGAAAACCTTGCTTCGGTTCCAAACGAGCGGTGGTGGCGATCCACGTTGCATCCTCCTTGGGGGCACCGTTTTGGAGAAACCTCTTCGTGCAAGGATATTGTCATTGGTCTATGCATTGGCGAACTTCAGTCCTAG
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| Protein seq | MLYITFFSYKIFSHITSPRRGRGDEGGETARSWQRGRRGDGAALGAAVGCSTVSALRGSSDGRRRCQIWSPRLAGVIGDGLGRRRRRSADLAGGVASGGDGGGCGGDEVGDDGAGLRRVPRRRPSSRTSPPRGRRGALVNAPAVNAMPVSPGAGVPLTAGTIVGGGLGRIAKGTMLLIDDDTSCADWWCGFGLGIVGESIAEPFGRLTTVTPFGVVPLLGGVHTPFLSLPYSPGENLASVPNERWWRSTLHPPWGHRFGETSSCKDIVIGLCIGELQS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0208500 | SBH | 0.844956 | 0.284359 | 7.707777 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0208500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0009800 | SBH | 0 | 0 | 0.0137105 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0004920 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0023900 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0005080 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0024000 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0024040 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
