Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsKYG_04g0018770		OGI:04080300 \| 16/16			KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)			Chr04:26450468-26455105		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		ACAGAATGGCATTTGTATGAGTCAGTTTTATTTATCTCCCTAGAAATATGACATAAAGAATGAATGCAAACTCCCAAAAAATTCCTACATAAGTAAACAGAGAGAGGGAGCAAAAGGGCATTGCCCTGACTAGAACATATATAAATACATCATAAGTTATCCTTCTTTGAAGAATGATCAGAAGCAGGCGAGGATGAAGAGCTCATCCTGGCCCTATCTCTAGACTCACTTAACATAACTACAACATTCCGCATCGGTGGTCTGTCATATGGAGACATACTAGTACATAGCAATGCAATTTTCAAGACCTCAATCATATGATCGACAGACGTTTTGTCTTCCAAATTCAGATTCTTATCAAGAATCCCTGGACCCAAAGAATTGTCCCTGATGTAATTCTTTACCCATGTTACCAGATCACCTCCCAGTTCTAATGGTTGTACAGGGGCACGTCCGGTTAGCAGCTCCAGCAGTACGACGCCGTAACTGTATATGTCACTTTTTTCAGTAACCTTCATGGTGTATGCATATTCTGATCAAAGGAGAACTAGGTTAGTACTTTGTAGGAAACAATCACATGTACTTTCTGCTAGTATAAAGCAATCAAGTGGTATAGTAGCCTAGGATTTTACAAGCAATTTCAAGTAAAAGAGATAAGAGCTATAACAGGAATAAGTATGCAAAGTAACAGTAGAAGACTCACCAGGTGCTATATATCCATATGAACCAGCAATTGCAGACATTGATTTTGAGTATGGCATGTCTATCACCTTTGCCAATCCAAAGTCACCAACATGAGCTTCAAAGTTCTCATCAAGTAAAATGTTATTTGATTTTATATCACGGTGGATGATGCGAGGTTTGCAATCGTGATGCAAGTAAGATAGCCCTTCAGCTGATCCTAGGGCTATCATGAAGCGTGTCTCCCAATCAAGTGAAGACGAAGATTGCCCATGAAGTAACTCCCCAAGGCTTCCTCTTGGCATGTATTCATACAACAGAAGGTTGGAACCCTGGTGATAGATGAACCCATATAACTTCACAATATTACGATGCCTTATCTTTCCTAGAGTAAGGATCTCTGCACGAAAACTATTGTCTGTGTTGCTTCCCTCTCTGTTAGAAGCCAGCTTCTTTACAGCAATTGTCTGTCCAGCTTTCAAGATGGCTCTGTACACTGTTCCACATGCACCTCTTCCAATAACACAACTCTCGTCAAAATTATTTGTGGCAGAAACCAATTCCTGAAATGTATATGCATCCTTGGTAGAAACCTGCATGTTAGACCCAGCAGAAAATATTTGCTTGTCTTGCAAAGGAGCTACTGTTTCTAGTGGTTTTCTCATATGATACACAATTATAACGATAAGAATAAGTGAAATTCCTCCAATAACAGCAGCAACAATTGCTATGACCTTGCCCAAAGGGGGGCTGCCTGAATTGGATGACTGGGAAGAAGATATTGACTCAGACCCACATTTGCCAAGTTGTCCGCCACATAGTCCTTTGTTTCCAAGAAAGCTGGTTGACGCCATGTTATCAAAAAGTGGTATAGTGGGGAGAGCGCCGGTGAGATTATTGTAGGAGACATTGAACTCAAGCAAACTAGACAGATTTGCAAAGGTATCTGGGATTTCACCTGTCAGCTTGTTATTATTGAGAAACAAATTTTCCAATAATGCAAGATTACCAAGCTCTGATGGTATGTTGCCAGAGAGATTGTTATAACTCAAATTCATGGCGATCTGCAAACTTGAGAGTAGTCCAAGCTCCTTCGGTATTCCACCAGAGAATTGATTGCCACCAATCTGTAGAGCTGTCAAATGTGAAAGTTTACCAAGAATAGGTGGTATCTCTCCAGAGAGCCTATTGTCAGCAAATGATAGCAGCTCCAGCTGAGGCAGGCTGCCAACTTCATTTGGCAATGAACCTTCGAAGCTATTTTGGCTGAGATCTAGGCGTTGCAACATAGTGCAATTGAAAATTTCTAATGGTATGCTTCCGCCTAGTCTATTGGATGATATATTGAAGACGACGAGCTTTGACAGATTACCTATTTCTTGAGGCAACTCTGATGTGAAATAGTTATTTGTTAGGTCAAGCCTTTGGAGAGACTTGCAATTGCCTATCTGAGGAGGAATAGGACCATTGAACTTGTTTCGACCCAGCTCAATTGTTGTCAAATTCACCAGATTGCAGAGATCAGTTGGGAAGCTTCCTGTCAGACTGTTATCAGCGAGACGAAGCTGCACCAAGGATTTACAACTGGTGATTCCATGGGGGATGTTCCCAATCAGCTTGTTAGCCCCCAAATTCAACAAAATAAGGTTCGACTGCCTGCAAAGATCTCGAGGTATCTGCCCGGTTATATTATTATTTGAGAAATCCACCACCCAAAGCCGGCTATAGATACCAAATCTTGGAGGTATGTCACCTGACAGCATATTGTTGAATAGTTGCAATTGGATTAGTCTGCTCATGTACTGAAAACAGGCTGGAATTGGGCCACTGAGTGTATTGATCGAAAGATCAAGCTTACTCAAATTCCTCAATACACACAACTCGGTAGGAATAGGGCCAGTGAGTTGGTTTTGGAAGAGATAGAGTAAATACAATCGTGGTATCTTGCCAAATTCCTTTGGTACCCCTCCAGTTAAAACATTCTCTGAAAAGTCAATCTCCTCTGCAAGAGAAAGATTGCCAATTTCTAACGGAATCGTACCATTTAATAAATTCCTGTAGAGGTATAGCCTCTGAAGGTTCTGGATGTTCCCGATTGTTGCAGGAATAGGCCCAACCAGATTATTGTCATAAAGGGCAATTGTCCTAAGATTTATGCAGTTTCCAATCTCTGGGGGAATCACACTAGAAAGCTGATTTCCCCACAATATTAAGTCTGTCATATTTGTCAGTTTCCCAATCTCCTTAGGCAATGGCCCTCCTAACTTGTTTTGTGCAAGACCAAACACCACCAGGTTGAGGCATTCACCTATCTCGACAGGAATGTTACCAGATATTGCATTCTGACCTAACCGGACGGTTTTCAGGTTCTTAAGCCTACCAATAGTATGAGGTATAGAGCCAGAGAGATTATTGCTGTACCCTACCAGGTCCTCGAGTGATGCCATATTACCAATCTCATCAGGTATTGCACCAAAGAGCTTGTTGTTGCACAGGTTGAATGTGATCATCATAGCCAGCTTCCCGAGCTCAGCGGGGATTGTGCCCTGGAACTGGTTGTTGTTCAAGTTGAGCCCCGTCAACTTCGAGCAATTCCCAATCTCTGCAGGGATAGTGCCAGAAAACCCATTGAATGACAGATCAAGGTTAGTCAGCTCAGCCAGGCCACCAATGCTCGGGTCGACGGTGCCCGACAGGTTCATGTTGCTGAGGTTGAGGGACACCACCGCCGGCGTAGACCCCGACGAGCAGTTGACGCCCTTCCACCCGCACGGCGATGGATCCTCGGGGTTCCAGTCGTCAAGGTGGTGGAAGGTGTCAACTATCTGCTTCCTCAGCGTCAGGAGAAGCCAGCCTTCATGGTTCAGGCCATGGCAGGTAGTGGCCAGCAGGAAGGCCAGCGCCACGCCGAGCTGCAGAGCCCAGGGCGTGCGAGCCGCCGCCGCAGAGCCCATCTTCCCTTCACAATGGTCGCAGTGGAACCAGAGCCGAACCCCCCCCCCCCCCCCCTCCCTACGACCTCGTGCGCTGCCGCATCTCTACGACCTGGAATAGGATGCAAAGAGGAGTTTAGAACATGCAGCAAGAGACGTGAAAAGATCAGCTTTTGGATTGGAAAAAAGATTCTTAGGACCAGGAACTGTCTGCAAGCTAACAAGGAACTACTTTTGCATTGTCTGGACACTAAAAAACAAGGCAGCACAAATCCATCTGAACTCATCTAATCTAAACCCCCCCGAAGGTCAGAGAATCATCCAAAGCTGGGACCGAATTGAGGCCATCCGAATCAAGAAGCACGGCCAAAAACAGCAAGAATCCGATCCCTCTGACCAGGAATGGTACCCGGGCTGGGCTTCAGCTCATCAAGAATCTGAACAGGAGCGGGCGGCCACCCAATCACACCCACCATTTCCCAGCAGTGAAGGGATTTTAGCGCCCAGGGAAACCCCACCTCCCCCCCGAATCACGGGAGCCCCCACCCCATCATCCCCGGCGGGTCCCAGGAACACACCGCCGCGCACCACCCACCGGAAGCAGATCGGGGAGAGAGAGAAAAAGAATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAACCGAGTCTTTCCCGACGCGACGCGAGCTCCGCGGTTGCAGAAGCCAAGCCATGCCGCACTGCAACAGCGAGGAGCACACCCACCGGGGAGCACGGTAATGCAAGGTATGCGCGCGCGAACTCACCGCTCACCGACGCGTGCTCTCTCGCCGCCGCCGCCGCCGCGGATGGGTCGCCGCTGTCGGCTGGCACGCTGGAGCACCGTTGCGACGGCGAGGTCGGGCCGGGCGCGTCCACCGGCGGGAGCTAGTAGTGGTAGTATTAGGAGGAGGAATGGGCGAGGAAGAGAGAAGAAACCTCGTCGTGGCTCGCCGTGGAGGGAGGGGGGAGAAGAGGTGGCGGAGGTGGGAGATGGAGATG More
CDS seq		ATGGGCTCTGCGGCGGCGGCTCGCACGCCCTGGGCTCTGCAGCTCGGCGTGGCGCTGGCCTTCCTGCTGGCCACTACCTGCCATGGCCTGAACCATGAAGGCTGGCTTCTCCTGACGCTGAGGAAGCAGATAGTTGACACCTTCCACCACCTTGACGACTGGAACCCCGAGGATCCATCGCCGTGCGGGTGGAAGGGCGTCAACTGCTCGTCGGGGTCTACGCCGGCGGTGGTGTCCCTCAACCTCAGCAACATGAACCTGTCGGGCACCGTCGACCCGAGCATTGGTGGCCTGGCTGAGCTGACTAACCTTGATCTGTCATTCAATGGGTTTTCTGGCACTATCCCTGCAGAGATTGGGAATTGCTCGAAGTTGACGGGGCTCAACTTGAACAACAACCAGTTCCAGGGCACAATCCCCGCTGAGCTCGGGAAGCTGGCTATGATGATCACATTCAACCTGTGCAACAACAAGCTCTTTGGTGCAATACCTGATGAGATTGGTAATATGGCATCACTCGAGGACCTGGTAGGGTACAGCAATAATCTCTCTGGCTCTATACCTCATACTATTGGTAGGCTTAAGAACCTGAAAACCGTCCGGTTAGGTCAGAATGCAATATCTGGTAACATTCCTGTCGAGATAGGTGAATGCCTCAACCTGGTGGTGTTTGGTCTTGCACAAAACAAGTTAGGAGGGCCATTGCCTAAGGAGATTGGGAAACTGACAAATATGACAGACTTAATATTGTGGGGAAATCAGCTTTCTAGTGTGATTCCCCCAGAGATTGGAAACTGCATAAATCTTAGGACAATTGCCCTTTATGACAATAATCTGGTTGGGCCTATTCCTGCAACAATCGGGAACATCCAGAACCTTCAGAGGCTATACCTCTACAGGAATTTATTAAATGGTACGATTCCGTTAGAAATTGGCAATCTTTCTCTTGCAGAGGAGATTGACTTTTCAGAGAATGTTTTAACTGGAGGGGTACCAAAGGAATTTGGCAAGATACCACGATTGTATTTACTCTATCTCTTCCAAAACCAACTCACTGGCCCTATTCCTACCGAGTTGTGTGTATTGAGGAATTTGAGTAAGCTTGATCTTTCGATCAATACACTCAGTGGCCCAATTCCAGCCTGTTTTCAGTACATGAGCAGACTAATCCAATTGCAACTATTCAACAATATGCTGTCAGGTGACATACCTCCAAGATTTGGTATCTATAGCCGGCTTTGGGTGGTGGATTTCTCAAATAATAATATAACCGGGCAGATACCTCGAGATCTTTGCAGGCAGTCGAACCTTATTTTGTTGAATTTGGGGGCTAACAAGCTGATTGGGAACATCCCCCATGGAATCACCAGTTGTAAATCCTTGGTGCAGCTTCGTCTCGCTGATAACAGTCTGACAGGAAGCTTCCCAACTGATCTCTGCAATCTGGTGAATTTGACAACAATTGAGCTGGGTCGAAACAAGTTCAATGGTCCTATTCCTCCTCAGATAGGCAATTGCAAGTCTCTCCAAAGGCTTGACCTAACAAATAACTATTTCACATCAGAGTTGCCTCAAGAAATAGGTAATCTGTCAAAGCTCGTCGTCTTCAATATATCATCCAATAGACTAGGCGGAAGCATACCATTAGAAATTTTCAATTGCACTATGTTGCAACGCCTAGATCTCAGCCAAAATAGCTTCGAAGGTTCATTGCCAAATGAAGTTGGCAGCCTGCCTCAGCTGGAGCTGCTATCATTTGCTGACAATAGGCTCTCTGGAGAGATACCACCTATTCTTGGTAAACTTTCACATTTGACAGCTCTACAGATTGGTGGCAATCAATTCTCTGGTGGAATACCGAAGGAGCTTGGACTACTCTCAAGTTTGCAGATCGCCATGAATTTGAGTTATAACAATCTCTCTGGCAACATACCATCAGAGCTTGGTAATCTTGCATTATTGGAAAATTTGTTTCTCAATAATAACAAGCTGACAGGTGAAATCCCAGATACCTTTGCAAATCTGTCTAGTTTGCTTGAGTTCAATGTCTCCTACAATAATCTCACCGGCGCTCTCCCCACTATACCACTTTTTGATAACATGGCGTCAACCAGCTTTCTTGGAAACAAAGGACTATGTGGCGGACAACTTGGCAAATGTGGGTCTGAGTCAATATCTTCTTCCCAGTCATCCAATTCAGGCAGCCCCCCTTTGGGCAAGAACTTTGAAGCTCATGTTGGTGACTTTGGATTGGCAAAGGTGATAGACATGCCATACTCAAAATCAATGTCTGCAATTGCTGGTTCATATGGATATATAGCACCTGAATATGCATACACCATGAAGGTTACTGAAAAAAGTGACATATACAGTTACGGCGTCGTACTGCTGGAGCTGCTAACCGGACGTGCCCCTGTACAACCATTAGAACTGGGAGGGAGATAA More
Protein seq		MGSAAAARTPWALQLGVALAFLLATTCHGLNHEGWLLLTLRKQIVDTFHHLDDWNPEDPSPCGWKGVNCSSGSTPAVVSLNLSNMNLSGTVDPSIGGLAELTNLDLSFNGFSGTIPAEIGNCSKLTGLNLNNNQFQGTIPAELGKLAMMITFNLCNNKLFGAIPDEIGNMASLEDLVGYSNNLSGSIPHTIGRLKNLKTVRLGQNAISGNIPVEIGECLNLVVFGLAQNKLGGPLPKEIGKLTNMTDLILWGNQLSSVIPPEIGNCINLRTIALYDNNLVGPIPATIGNIQNLQRLYLYRNLLNGTIPLEIGNLSLAEEIDFSENVLTGGVPKEFGKIPRLYLLYLFQNQLTGPIPTELCVLRNLSKLDLSINTLSGPIPACFQYMSRLIQLQLFNNMLSGDIPPRFGIYSRLWVVDFSNNNITGQIPRDLCRQSNLILLNLGANKLIGNIPHGITSCKSLVQLRLADNSLTGSFPTDLCNLVNLTTIELGRNKFNGPIPPQIGNCKSLQRLDLTNNYFTSELPQEIGNLSKLVVFNISSNRLGGSIPLEIFNCTMLQRLDLSQNSFEGSLPNEVGSLPQLELLSFADNRLSGEIPPILGKLSHLTALQIGGNQFSGGIPKELGLLSSLQIAMNLSYNNLSGNIPSELGNLALLENLFLNNNKLTGEIPDTFANLSSLLEFNVSYNNLTGALPTIPLFDNMASTSFLGNKGLCGGQLGKCGSESISSSQSSNSGSPPLGKNFEAHVGDFGLAKVIDMPYSKSMSAIAGSYGYIAPEYAYTMKVTEKSDIYSYGVVLLELLTGRAPVQPLELGGR
Function		Probable leucine-rich repeat receptor-like protein kinase At2g33170 [UniProtKB/Swiss-Prot:O49318]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsKYG_04g0018770	OsKYG_04g0018770.01	Chr04	26450499	26455105	-	NAM
CDS seq	ATGGGCTCTGCGGCGGCGGCTCGCACGCCCTGGGCTCTGCAGCTCGGCGTGGCGCTGGCCTTCCTGCTGGCCACTACCTGCCATGGCCTGAACCATGAAGGCTGGCTTCTCCTGACGCTGAGGAAGCAGATAGTTGACACCTTCCACCACCTTGACGACTGGAACCCCGAGGATCCATCGCCGTGCGGGTGGAAGGGCGTCAACTGCTCGTCGGGGTCTACGCCGGCGGTGGTGTCCCTCAACCTCAGCAACATGAACCTGTCGGGCACCGTCGACCCGAGCATTGGTGGCCTGGCTGAGCTGACTAACCTTGATCTGTCATTCAATGGGTTTTCTGGCACTATCCCTGCAGAGATTGGGAATTGCTCGAAGTTGACGGGGCTCAACTTGAACAACAACCAGTTCCAGGGCACAATCCCCGCTGAGCTCGGGAAGCTGGCTATGATGATCACATTCAACCTGTGCAACAACAAGCTCTTTGGTGCAATACCTGATGAGATTGGTAATATGGCATCACTCGAGGACCTGGTAGGGTACAGCAATAATCTCTCTGGCTCTATACCTCATACTATTGGTAGGCTTAAGAACCTGAAAACCGTCCGGTTAGGTCAGAATGCAATATCTGGTAACATTCCTGTCGAGATAGGTGAATGCCTCAACCTGGTGGTGTTTGGTCTTGCACAAAACAAGTTAGGAGGGCCATTGCCTAAGGAGATTGGGAAACTGACAAATATGACAGACTTAATATTGTGGGGAAATCAGCTTTCTAGTGTGATTCCCCCAGAGATTGGAAACTGCATAAATCTTAGGACAATTGCCCTTTATGACAATAATCTGGTTGGGCCTATTCCTGCAACAATCGGGAACATCCAGAACCTTCAGAGGCTATACCTCTACAGGAATTTATTAAATGGTACGATTCCGTTAGAAATTGGCAATCTTTCTCTTGCAGAGGAGATTGACTTTTCAGAGAATGTTTTAACTGGAGGGGTACCAAAGGAATTTGGCAAGATACCACGATTGTATTTACTCTATCTCTTCCAAAACCAACTCACTGGCCCTATTCCTACCGAGTTGTGTGTATTGAGGAATTTGAGTAAGCTTGATCTTTCGATCAATACACTCAGTGGCCCAATTCCAGCCTGTTTTCAGTACATGAGCAGACTAATCCAATTGCAACTATTCAACAATATGCTGTCAGGTGACATACCTCCAAGATTTGGTATCTATAGCCGGCTTTGGGTGGTGGATTTCTCAAATAATAATATAACCGGGCAGATACCTCGAGATCTTTGCAGGCAGTCGAACCTTATTTTGTTGAATTTGGGGGCTAACAAGCTGATTGGGAACATCCCCCATGGAATCACCAGTTGTAAATCCTTGGTGCAGCTTCGTCTCGCTGATAACAGTCTGACAGGAAGCTTCCCAACTGATCTCTGCAATCTGGTGAATTTGACAACAATTGAGCTGGGTCGAAACAAGTTCAATGGTCCTATTCCTCCTCAGATAGGCAATTGCAAGTCTCTCCAAAGGCTTGACCTAACAAATAACTATTTCACATCAGAGTTGCCTCAAGAAATAGGTAATCTGTCAAAGCTCGTCGTCTTCAATATATCATCCAATAGACTAGGCGGAAGCATACCATTAGAAATTTTCAATTGCACTATGTTGCAACGCCTAGATCTCAGCCAAAATAGCTTCGAAGGTTCATTGCCAAATGAAGTTGGCAGCCTGCCTCAGCTGGAGCTGCTATCATTTGCTGACAATAGGCTCTCTGGAGAGATACCACCTATTCTTGGTAAACTTTCACATTTGACAGCTCTACAGATTGGTGGCAATCAATTCTCTGGTGGAATACCGAAGGAGCTTGGACTACTCTCAAGTTTGCAGATCGCCATGAATTTGAGTTATAACAATCTCTCTGGCAACATACCATCAGAGCTTGGTAATCTTGCATTATTGGAAAATTTGTTTCTCAATAATAACAAGCTGACAGGTGAAATCCCAGATACCTTTGCAAATCTGTCTAGTTTGCTTGAGTTCAATGTCTCCTACAATAATCTCACCGGCGCTCTCCCCACTATACCACTTTTTGATAACATGGCGTCAACCAGCTTTCTTGGAAACAAAGGACTATGTGGCGGACAACTTGGCAAATGTGGGTCTGAGTCAATATCTTCTTCCCAGTCATCCAATTCAGGCAGCCCCCCTTTGGGCAAGAACTTTGAAGCTCATGTTGGTGACTTTGGATTGGCAAAGGTGATAGACATGCCATACTCAAAATCAATGTCTGCAATTGCTGGTTCATATGGATATATAGCACCTGAATATGCATACACCATGAAGGTTACTGAAAAAAGTGACATATACAGTTACGGCGTCGTACTGCTGGAGCTGCTAACCGGACGTGCCCCTGTACAACCATTAGAACTGGGAGGGAGATAA More
Protein seq	MGSAAAARTPWALQLGVALAFLLATTCHGLNHEGWLLLTLRKQIVDTFHHLDDWNPEDPSPCGWKGVNCSSGSTPAVVSLNLSNMNLSGTVDPSIGGLAELTNLDLSFNGFSGTIPAEIGNCSKLTGLNLNNNQFQGTIPAELGKLAMMITFNLCNNKLFGAIPDEIGNMASLEDLVGYSNNLSGSIPHTIGRLKNLKTVRLGQNAISGNIPVEIGECLNLVVFGLAQNKLGGPLPKEIGKLTNMTDLILWGNQLSSVIPPEIGNCINLRTIALYDNNLVGPIPATIGNIQNLQRLYLYRNLLNGTIPLEIGNLSLAEEIDFSENVLTGGVPKEFGKIPRLYLLYLFQNQLTGPIPTELCVLRNLSKLDLSINTLSGPIPACFQYMSRLIQLQLFNNMLSGDIPPRFGIYSRLWVVDFSNNNITGQIPRDLCRQSNLILLNLGANKLIGNIPHGITSCKSLVQLRLADNSLTGSFPTDLCNLVNLTTIELGRNKFNGPIPPQIGNCKSLQRLDLTNNYFTSELPQEIGNLSKLVVFNISSNRLGGSIPLEIFNCTMLQRLDLSQNSFEGSLPNEVGSLPQLELLSFADNRLSGEIPPILGKLSHLTALQIGGNQFSGGIPKELGLLSSLQIAMNLSYNNLSGNIPSELGNLALLENLFLNNNKLTGEIPDTFANLSSLLEFNVSYNNLTGALPTIPLFDNMASTSFLGNKGLCGGQLGKCGSESISSSQSSNSGSPPLGKNFEAHVGDFGLAKVIDMPYSKSMSAIAGSYGYIAPEYAYTMKVTEKSDIYSYGVVLLELLTGRAPVQPLELGGR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsKYG_04g0018770	OsKYG_04g0018770.02	Chr04	26450468	26451286	-	IsoSeq
CDS seq	ATGCCCTTTTGCTCCCTCTCTCTGTTTACTTATGTAGGAATTTTTTGGGAGTTTGCATTCATTCTTTATGTCATATTTCTAGGG
Protein seq	MPFCSLSLFTYVGIFWEFAFILYVIFLG

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.197257	27.203178	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0534166	RBH	0.000000	0.000000	0.0
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g42700	RBH	0.082613	0.168246	0.931966
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0534166	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0019210	RBH	0.250173	18.465075	7.961412
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0019990	RBH	0.000000	2.878314	4.202378
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0019710	RBH	0.197623	7.386014	13.799141
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0019430	RBH	0.087951	0.232958	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0019640	RBH	0.000000	0.000000	20.992216
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0520300	SBH	0	0	0
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0018450	RBH	0.073557	1.009289	1.709794
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0396400	RBH	4.3406925	25.181985	14.2297315
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0018920	RBH	0.003662	0.270175	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_02g0028300	RBH	0.0	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0018900	RBH	0.000000	26.699585	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0019270	RBH	0.534934	1.201555	1.513428
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0019440	RBH	0.082115	8.156088	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G018720	RBH	0.283235	4.341980	3.325762
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0018670	RBH	0.181856	16.725006	10.295066

Custom TreePlot

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.