Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKYG_02g0029820 OGI:02081330 | 16/16 KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) Chr02:30377729-30383580
Gene Symbol CDKF;4, CDKF;4, Orysa;CDKF;4
DNA seq

GCCGGAGACGGGACGGGTTTGAGGTTGGGGAGTATGGTTATAAAAAGTAACGGGGCGCGACGCGGGTAGAAACCGTGGTGGAGGCAAAGGCGCCGCGGGCTTGGCTTGGCTGGCACCCTCTCCTCCTCGTCTTCGGCTTCGTCTTCCCCCGTCAAACCCACCCACGCCGGCCGCCGACGCCGCCGCCGTTGCGGCGGGTGCTTCCCCCGCTCGCGTCGGTGCCGGGGGGAAGAGGGGGAGGGGGAGGGAAGGCACGCGGCTGACCTCGTGGGGGAGGGGAGGGGGGGAACGGGGCGACACCACCCACCCACCGCCACCATATGCTCGTTGCCCGCCTGGTAAGGTATGGTATCTGTTTCATTCCATTGCCCCCCATCTTTCTCGTGCTTGCGCCCCTGCCCCCGCCGCTGTACTTTCGCGTGCCCTGGATTAGCTGGTTGGTTCATCTGCTTGTTGCGGCGCGCGGCGGATCTGTGCCTCCAGCCGCCGGATCTGGGTGGTTCGCGGGCGTTCGGTGCAATGCGAGTCTGCGCGTAAGTTTTTTTTTGTGTGTTGTGGTGAACAGTGGTGATAATTATTGCAGGGTGTTTTTTTTATCTTGTGGGGGTCGTGTCCCTGTTGGGACCTCGGATCTGTTCTTGTTTCGTGGCTAATTTGGATTTTATGGCAGAAGGAAGACGTTTTGTCACAATAGATTGAGAACGCTCTCTTTTTCCTTCCCATGGATGGTCATAATCTGTGCCTTTTGGTGCTTAGCGTTGTAATTTGTGATTAGGGTAGCAATGCAGATTGTTTCACATCATGTTCCAACCCAAGGCAATGCTTCTGAGTTACGAAATGTTTGTAATATTTATGACCTTGCTGTCTTGCCATGCTTGATCGATCATTGTTGTTAAATTGGATACCCGCATTACTTCCAATTTTTTTGCACTTCTTAGGTAGTTAGGGGTATAGGATGATCATTCCATGTCGACGCCTTATTGCAACTGATTGAATAGTAGCATCGGTGTCAATATTTTGTCAATGCAGCAGCAACACTCTACCTTATCAGGCAATGTTACCTATAGTGCATTTTTTTTTATTCTAGGAGGAAGTGTATTTGATTGCTGCCAAGAAGGCAGTGCTTCATTTTGCACACATCAGTTTTGGTAATTGCATCATGTGGCCTGTACATCATTGTTCGCAAAGAAGAGAAAACTGAAGCGCTATAAATCCTTCAAGCAGTTTTTTCGGTCTAAACCCAGCCATATCTGAGTATGTTAGAATGATTATTATGTGCAAGGTTTCTGTCGGTTTTGATTGTGATCCTCAGACATACCTTGTGACGCAGATATTCATGCTGAGTTGATTCCTTCTAGTCACTTTGCATGTACCTATAGTTTGAACATGTGCACGGAAGTAATGATCTTTGACTGTGTTATATGTTTCTGACTTAAATCTGTTATATTAGATTGGACCAGCTGTGATTTGGGGAGCTTAAAGTGTTGATCAGAGACATGGAAAAAGTGATCTTCTGGGCACATCTCCTTAAATGCAAGCTTTTTCTTTCAAAAGAAACTCTTGATTGGTGTGTTTTAGCTCGTGGGAACACCCACCACTTCTCTCTGGTGAACTACACATAGTGGTTTTATGCTCCTTTATGCTCAAGAAACATTTGGCTGATTCAATCTTTTTCCTGAAGCCATATTTCAAGTCTGCCAAACATCTACATGTAATGCACCTACTTCATAGCTTGTTCTTCCTTCATTTTGTGTCATATGGACTAATTTAGCTAACCACCATCTTTTTATTCTACTAGCACGTCATCTCTAAAGAAGCTTCCTTTAAGTTGTAGATGCTGATCATATAAGCTGGGTATGCCTCTTTTTACTGTTCATTGATGCATTTATTGGCATTTAGAGAAATAAATTCTTGCAACTTGAAATATTCTAAACAACTTACTCCTTCCCTTATTTTGTAGGGTTAATACCTTTGCTCATTTGTTTGTCATCTGTTGCTCCCTAGTTAATTACCACTAGTGTTGCATTGAGGTCAGGGTTCATCCTTGCTATAGTATGCAACTATATACTATGGTTGCTGCTTGATCTTCTGAGTGAACCAAGATCCAAGAAAACATAAGGTGCTGGGGCTACTGTTCAATTGACTGGTTGCATATATTTGTTCGTGCTAATCGATAGACTAGTCAATTGGAAGTGGTGGCAAACACCTGTCTTTGTGACTTGGCTGTCCAACAGGAAAAGGCTAGCACAAGGCTGACATTGACCGGCATAATGGACAGGTAACTTTCATATTGACTTACTATTTTTAGGTCACCTTTTTCTTATCAAGTATGTTGTCTTTGCAGATTCAAAATGATTAAGGAAGTTGGTGACGGGACTTTCGGGAGTGTATGGCGTGCTATAAATAAACAAAATGGTGAAGTTGTATGTATCTGAAGATAAATCCATAGGAGGAAATATGCATTTCATACTTTTGCAAAATATTCCCAGTGAAATAAATAACTGATTGTAAGCAAAATGTGCACTGATCTATAGGTGGCAGTTAAGAAAATGAAGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGGTATTTTAACTGAAAGATGTACCCTCTTTCCTGCTATGAACCTTCAACTGATATTTCTCCTATATTGAAGTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAAGGGAAAATGACATATTATACTTCATAATGGAATACATGGTACTTAAGGATGTCATATACCGCAAAAGTTTAATTAGCTCTGTATCGCTTTTGTTAAGTCTCCCATGTTCTTCCAGGAGTGCAATCTCTACCAACTTATGAAGGATAGAGTCAAGCCTTTCTCAGAGGCAGAAGTCCGGAATTGGTGCTTTCAGATTTTTCAGGCTCTTGCATACATGCACCAGAGGGGTTACTTTCATCGTGACCTGAAACCTGGTAGGTTCTCTTGTTTAGTCAACATCTTCACCTATATTTCTGTGGCAATCAAATTATGAAACTACGGATGAGTATCAGATGTAGGTATGCAGAATCAGGGTATTATTGTATTGAGAATATGAGACATTTAGCCTTTATTTTTACCACATCTACTTTGCAAACTGACCGAGATATACTTTCTAATAAATATATACTTTCATGTGGGATTGTATTGTGCTTATAGCTATGGCACTAATCACTGTACTAATGCAGAGAATCTGTTGGTTAGCAAAGATGTCATAAAGCTGGCGGACTTTGGTCTTGCAAGGGAAGTTACATCCGTGCCACCATACACAGAATATGTGTCAACTCGCTGGTTAGTAGCACTCTACTCGCACACGTGGACACAAATCCCTTTTCTTTGTTAATGTTGATCCACATGTGTTTGAACATCTCAGGTACCGAGCACCTGAAGTATTGCTCCAGTCATCTATCTATGATTCTGCAGTTGGTAAAGTTTCTACTATCTACTTTGTATTTTGGCACATATAGTACATACTAAGTCATGATTGGATGATCCCCTTTTTGCCAACTTGCAGATATGTGGGCTATGGGTGCCATAATGGCCGAGCTGTTGACACTTCATCCTCTTTTTCCTGGCACAAGGTATAATATGCATATATCATATGTATATGCATTGTTGTTATGATTTGTAGTCACGTATCTCTCTGTGCTTGCCATGTATTTTGGGCATCTGTTATTCTGTCTCTCTTATTATATTTCTTCTTTGTGGTGGTCATATTTGCTCATTGCTGTTCTCTTTATCCAACTGTTTAGTGAGGCTGATGAGATTCTGAAGATTTGCAATGTTATCGGTAGCCCAGATGAACAATCATGGCCACAAGGATTGTCTCTTGCAGAGACCATGAAGTTTCAGTTCCCTCAGGTCAGTATTCATCTTCCCCTTTTCCCTTTGCCTATATATGTTTTCTTTTGGGGGTAAGCTCTTTGTTGTGATTATACTTGTTTCTGAATGTGTCATGAATCTTTGATATGTGTTGAGCCCATTCTGCAACTGTTTATTTTAATCCCTTGGTCATTCTCTGATGAATTTTGTCCTTGTGCCTCCCTATCTCTCTAGACAATGGTGGAATTATATCACTTCGCATGCCTTACAATCTTTCATCTCCATTAGTCCATTGCCTCCTTTTCCTCGCATATTATCATAGGTTTAAAAGCGTAGTGTCTTGTTCTAACTTGATTCATGAGTTTGACATAGATTGTCCATAAATAGTGGCTTAACACTTAACTAATCTCATGTGGATCTTATCAATGCAGGTCAGTGGCAATCAACTGGCAGAGGTAATGACATCAGTCAGTAGTGAGGCAGTCGACCTGATTTCAGTAAGTTCTACAATTCTGTTGCCCCAGATGGCGTACTTAAAATCTTTAGATTATTTTATTATATTTGTTTCTTTCTACATCTGCAGTCACTGTGCTCATGGGACCCTTGCAAGAGACCAAAGGCTGCAGAAGTTCTCCAGCATACTTTCTTTCAGGTAAAATTACTATTCGAACTCCGTTGCTGTTGTCTGTACCTCTGTTGCAGAAGATAAATCAAATTTATTTTTGCCATCCACTAGGGCTGTACATTTGTTCCACCTACTGTCCGGTCAAAAGCTGGAGTGCTCCCTAAAACGCCTCCATGTGGTTAGTTTCCACACTGTTTTGCCTCACAACCTTGGTGTTCCTGGTACTCTTGTTATATCTATGATCTATTTGTTTCAGTTGGAGTAAAAGGAGTTTCGGAGCACGGCATGCCTCGAAGATACTCTACAGGAACTCTATCAACAACCAAACCTCATAGTAATGCATCTCTGAAATCAAGTGGCTTATCTAAGACCGGTAATATGTTTAATCTTTTTTCTCAATTGCTTGTTAGCTTGCATTGTAGGCTATATTTTTATTTCTCTTTCCACCTTCCAGGTGTACAAAGAAAACTTCAAATGGATCGTCAGGCGCCACAGAAGATTAAAAAACCTACTGAGAGTAATAATAAACTAACCACTAATCGAGTACCTGCAAGGAATAGCCCAGGCAAGTTTCCATAGTTGCTCTATTTGAATTCTACATCAATTTGTGGTTGACTTTGAAGATTTACATTCCCTTTGTGGCAATTATAGGTCACCCTGTATTAAGGCATTCACGCAGTTTACCTGAAACTGGCCGGGCAACAATGCACAAGGTTTCAACCCTTACCGAGAGATTATCTCATATGTCTGTTACCTCTCGAACGCGTACTACTCCCAAGCCTGCTGCCCCGTTACTGAAGGCTGGGCTCGGCAAGTCTGACTTACTGGGAAAAACAGACGAAATACCTCCTGCAAAGAGGTTGACAAGAAAATTAGTAAGCTAACGTAGCAGCATCCATACAGTGGAAGCTGGTTAGCTGGTGCAGAGAGGTGTTATAAGCTACAGAGCAAAATCCCGGTCTGCTGAAAATGATGGCACTGCCGGAGTGTTTGCCAAATTTGCTGCATCCAAGTGCCATAGTAGAATAAGTCGAGCCTGCCGATCCACGTGGATCTGCTTTTGCCCCAAGTTTGTTCCATGTTTGAATAGAACATGAGTGTGCTATATCGATTTGAATTGTTGTCGACCAGTGTTCACTCGCATATGCGGTCTGACAAATGGTAGACCCGCGAGCAGGAGGATGTTTGGCTTTTGCTTGTACAGTTTATGAGCTTTTGGGTGGCGGTCAAGTCTTTGTCGGGTCCTTGGCAAATGATACAATGCATAGTCTGGTTTTGACTTCGTCTGTGGCTCTATTCAGGTCTTTGTTTGAAGATGATGTCTCATTTCTCATGAACCTTCGAATGTTGGAAATGACCTGA

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CDS seq

ATGGACAGATTCAAAATGATTAAGGAAGTTGGTGACGGGACTTTCGGGAGTGTATGGCGTGCTATAAATAAACAAAATGGTGAAGTTGTGGCAGTTAAGAAAATGAAGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAAGGGAAAATGACATATTATACTTCATAATGGAATACATGGAGTGCAATCTCTACCAACTTATGAAGGATAGAGTCAAGCCTTTCTCAGAGGCAGAAGTCCGGAATTGGTGCTTTCAGATTTTTCAGGCTCTTGCATACATGCACCAGAGGGGTTACTTTCATCGTGACCTGAAACCTGAGAATCTGTTGGTTAGCAAAGATGTCATAAAGCTGGCGGACTTTGGTCTTGCAAGGGAAGTTACATCCGTGCCACCATACACAGAATATGTGTCAACTCGCTGGTACCGAGCACCTGAAGTATTGCTCCAGTCATCTATCTATGATTCTGCAGTTGATATGTGGGCTATGGGTGCCATAATGGCCGAGCTGTTGACACTTCATCCTCTTTTTCCTGGCACAAGTGAGGCTGATGAGATTCTGAAGATTTGCAATGTTATCGGTAGCCCAGATGAACAATCATGGCCACAAGGATTGTCTCTTGCAGAGACCATGAAGTTTCAGTTCCCTCAGGTCAGTGGCAATCAACTGGCAGAGGTAATGACATCAGTCAGTAGTGAGGCAGTCGACCTGATTTCATCACTGTGCTCATGGGACCCTTGCAAGAGACCAAAGGCTGCAGAAGTTCTCCAGCATACTTTCTTTCAGGGCTGTACATTTGTTCCACCTACTGTCCGGTCAAAAGCTGGAGTGCTCCCTAAAACGCCTCCATGTGTTGGAGTAAAAGGAGTTTCGGAGCACGGCATGCCTCGAAGATACTCTACAGGAACTCTATCAACAACCAAACCTCATAGTAATGCATCTCTGAAATCAAGTGGCTTATCTAAGACCGGTCACCCTGTATTAAGGCATTCACGCAGTTTACCTGAAACTGGCCGGGCAACAATGCACAAGGTTTCAACCCTTACCGAGAGATTATCTCATATGTCTGTTACCTCTCGAACGCGTACTACTCCCAAGCCTGCTGCCCCGTTACTGAAGGCTGGGCTCGGCAAGTCTGACTTACTGGGAAAAACAGACGAAATACCTCCTGCAAAGAGGTTGACAAGAAAATTAAACATGAGTGTGCTATATCGATTTGAATTGTTGTCGACCAGTGTTCACTCGCATATGCGGTCTGACAAATGGTCTTTGTTTGAAGATGATGTCTCATTTCTCATGAACCTTCGAATGTTGGAAATGACCTGA

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Protein seq

MDRFKMIKEVGDGTFGSVWRAINKQNGEVVAVKKMKRKYYSFEECMSLREVKSLRRMNHPNIVKLKEVIRENDILYFIMEYMECNLYQLMKDRVKPFSEAEVRNWCFQIFQALAYMHQRGYFHRDLKPENLLVSKDVIKLADFGLAREVTSVPPYTEYVSTRWYRAPEVLLQSSIYDSAVDMWAMGAIMAELLTLHPLFPGTSEADEILKICNVIGSPDEQSWPQGLSLAETMKFQFPQVSGNQLAEVMTSVSSEAVDLISSLCSWDPCKRPKAAEVLQHTFFQGCTFVPPTVRSKAGVLPKTPPCVGVKGVSEHGMPRRYSTGTLSTTKPHSNASLKSSGLSKTGHPVLRHSRSLPETGRATMHKVSTLTERLSHMSVTSRTRTTPKPAAPLLKAGLGKSDLLGKTDEIPPAKRLTRKLNMSVLYRFELLSTSVHSHMRSDKWSLFEDDVSFLMNLRMLEMT

Function Cyclin-dependent kinase F-4 [UniProtKB/Swiss-Prot:Q6Z8C8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKYG_02g0029820 OsKYG_02g0029820.01 Chr02 30377798 30383580 + NAM
CDS seq

ATGGACAGATTCAAAATGATTAAGGAAGTTGGTGACGGGACTTTCGGGAGTGTATGGCGTGCTATAAATAAACAAAATGGTGAAGTTGTGGCAGTTAAGAAAATGAAGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAAGGGAAAATGACATATTATACTTCATAATGGAATACATGGAGTGCAATCTCTACCAACTTATGAAGGATAGAGTCAAGCCTTTCTCAGAGGCAGAAGTCCGGAATTGGTGCTTTCAGATTTTTCAGGCTCTTGCATACATGCACCAGAGGGGTTACTTTCATCGTGACCTGAAACCTGAGAATCTGTTGGTTAGCAAAGATGTCATAAAGCTGGCGGACTTTGGTCTTGCAAGGGAAGTTACATCCGTGCCACCATACACAGAATATGTGTCAACTCGCTGGTACCGAGCACCTGAAGTATTGCTCCAGTCATCTATCTATGATTCTGCAGTTGATATGTGGGCTATGGGTGCCATAATGGCCGAGCTGTTGACACTTCATCCTCTTTTTCCTGGCACAAGTGAGGCTGATGAGATTCTGAAGATTTGCAATGTTATCGGTAGCCCAGATGAACAATCATGGCCACAAGGATTGTCTCTTGCAGAGACCATGAAGTTTCAGTTCCCTCAGGTCAGTGGCAATCAACTGGCAGAGGTAATGACATCAGTCAGTAGTGAGGCAGTCGACCTGATTTCATCACTGTGCTCATGGGACCCTTGCAAGAGACCAAAGGCTGCAGAAGTTCTCCAGCATACTTTCTTTCAGGGCTGTACATTTGTTCCACCTACTGTCCGGTCAAAAGCTGGAGTGCTCCCTAAAACGCCTCCATGTGTTGGAGTAAAAGGAGTTTCGGAGCACGGCATGCCTCGAAGATACTCTACAGGAACTCTATCAACAACCAAACCTCATAGTAATGCATCTCTGAAATCAAGTGGCTTATCTAAGACCGGTCACCCTGTATTAAGGCATTCACGCAGTTTACCTGAAACTGGCCGGGCAACAATGCACAAGGTTTCAACCCTTACCGAGAGATTATCTCATATGTCTGTTACCTCTCGAACGCGTACTACTCCCAAGCCTGCTGCCCCGTTACTGAAGGCTGGGCTCGGCAAGTCTGACTTACTGGGAAAAACAGACGAAATACCTCCTGCAAAGAGGTTGACAAGAAAATTAAACATGAGTGTGCTATATCGATTTGAATTGTTGTCGACCAGTGTTCACTCGCATATGCGGTCTGACAAATGGTCTTTGTTTGAAGATGATGTCTCATTTCTCATGAACCTTCGAATGTTGGAAATGACCTGA

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Protein seq

MDRFKMIKEVGDGTFGSVWRAINKQNGEVVAVKKMKRKYYSFEECMSLREVKSLRRMNHPNIVKLKEVIRENDILYFIMEYMECNLYQLMKDRVKPFSEAEVRNWCFQIFQALAYMHQRGYFHRDLKPENLLVSKDVIKLADFGLAREVTSVPPYTEYVSTRWYRAPEVLLQSSIYDSAVDMWAMGAIMAELLTLHPLFPGTSEADEILKICNVIGSPDEQSWPQGLSLAETMKFQFPQVSGNQLAEVMTSVSSEAVDLISSLCSWDPCKRPKAAEVLQHTFFQGCTFVPPTVRSKAGVLPKTPPCVGVKGVSEHGMPRRYSTGTLSTTKPHSNASLKSSGLSKTGHPVLRHSRSLPETGRATMHKVSTLTERLSHMSVTSRTRTTPKPAAPLLKAGLGKSDLLGKTDEIPPAKRLTRKLNMSVLYRFELLSTSVHSHMRSDKWSLFEDDVSFLMNLRMLEMT

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Gene Transcript Chromosome Start End Strand Source
OsKYG_02g0029820 OsKYG_02g0029820.02 Chr02 30377729 30383501 + IsoSeq
CDS seq

ATGGGACCCTTGCAAGAGACCAAAGGCTGCAGAAGTTCTCCAGCATACTTTCTTTCAGGGCTGTACATTTGTTCCACCTACTGTCCGGTCAAAAGCTGGAGTGCT

Protein seq

MGPLQETKGCRSSPAYFLSGLYICSTYCPVKSWSA

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
SE Chr02 30382591 30382870 + OsKYG_02g0029820.02 OsKYG_02g0029820.01,OsKYG_02g0029820.02 All

Expression

Leaf Root Panicle
FPKM 0.437247 41.506050 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0700600 RBH 2.051837 3.009068 26.007885
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g47220 RBH 1.025902 1.121897 6.035221
Nipponbare | IRGSP 1.0 | RAP-db Os02g0700600 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0030240 RBH 0.384334 94.858284 37.680092
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0030330 RBH 0.471104 13.926110 22.739553
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0030190 RBH 0.842514 71.670586 80.974892
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0029780 RBH 0.025781 1.978131 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0030000 RBH 2.644928 80.128044 73.014198
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0469300 RBH 19.5742855 42.136076 67.8799475
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0029770 RBH 0.238268 3.808028 19.830395
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0496400 RBH 24.7043145 16.1566445 95.9260255
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0030090 RBH 0.124778 0.687250 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0017450 SBH 1.602906 26.592688 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0030150 RBH 0.848383 78.474091 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0030000 RBH 0.556496 4.896557 7.662339
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0029670 RBH 0.158756 37.534065 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G030240 RBH 0.546507 24.224600 15.405527
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0030020 RBH 0.537813 70.923141 50.471336
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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