Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_12g0010910 | OGI:01022060 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr12:12731090-12731891 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGAGACACAGCCACTATACACACAGCAGCAAGTGCAAGACATTGTTCAGCAGGCAGTCACTAATGCTGTGCACAATGCTCATCAAGAACTAGCATCAAGGATAGAAAGGCTAGAGCAGACAGTGGGCAAGGATAAGACAGAAACTCATTCTCATGTAAGTATAAATTAAAGCTATTTTTGTTACCTAGAAAGAACATACTAACTGGTATTATTTTTCAAATCACAGGATGCAAATGGACCATCTTCTTCTGTTGTCCCTGAGTTCCTTCATGCACTTCTCATGGTATATACTGACTTCAATCTTTTTACTACTGTACATCCTTATTATTTATTCTCTTGAACAAACATTATGAAAAGTTTGGTTCTTGGACAACAATAGATCAATTTAAAAATGTTCTGCCAATGGTATGGCTTTAGTTGCGATACCAGTTAGTGAGTTCAATTTAGAAATGGACTGCTATGTATCATTCATAAGTTCAAACTTAGACCTACCCTTATAGTTTTTCAGTAACTTTGTAGCTTATTCTGTAATTTTATTTCAGAATGGGATGAACACTACTGAAGAGGCGCCACAAGCTGGTCATTGTGGAAGAACTTGTGAGAATGATGACCTCTGGCGTTTCTAGGATGTGCTAATGTCGAATTGCAAGCATTTAGAGATCAGGAATCCAGGATCATGTTATCAGACCTATTATAGTTGCTAGATTAATCAGTTTGATCAATTTACCATCTGAGACTATTTTATTTATGTGTTATTGTCTACAGACCTGTCTTAGATTAAATGCAAATATATTGTCTAC
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| CDS seq | ATGGAGACACAGCCACTATACACACAGCAGCAAGTGCAAGACATTGTTCAGCAGGCAGTCACTAATGCTGTGCACAATGCTCATCAAGAACTAGCATCAAGGATAGAAAGGCTAGAGCAGACAGTGGGCAAGGATAAGACAGAAACTCATTCTCATGATGCAAATGGACCATCTTCTTCTGTTGTCCCTGAGTTCCTTCATGCACTTCTCATGAATGGGATGAACACTACTGAAGAGGCGCCACAAGCTGGTCATTGTGGAAGAACTTGTGAGAATGATGACCTCTGGCGTTTCTAG |
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| Protein seq | METQPLYTQQQVQDIVQQAVTNAVHNAHQELASRIERLEQTVGKDKTETHSHDANGPSSSVVPEFLHALLMNGMNTTEEAPQAGHCGRTCENDDLWRF |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_12g0010910 | OsIR64_12g0010910.01 | Chr12 | 12731090 | 12731891 | + | NAM | ||
| CDS seq | ATGGAGACACAGCCACTATACACACAGCAGCAAGTGCAAGACATTGTTCAGCAGGCAGTCACTAATGCTGTGCACAATGCTCATCAAGAACTAGCATCAAGGATAGAAAGGCTAGAGCAGACAGTGGGCAAGGATAAGACAGAAACTCATTCTCATGATGCAAATGGACCATCTTCTTCTGTTGTCCCTGAGTTCCTTCATGCACTTCTCATGAATGGGATGAACACTACTGAAGAGGCGCCACAAGCTGGTCATTGTGGAAGAACTTGTGAGAATGATGACCTCTGGCGTTTCTAG
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| Protein seq | METQPLYTQQQVQDIVQQAVTNAVHNAHQELASRIERLEQTVGKDKTETHSHDANGPSSSVVPEFLHALLMNGMNTTEEAPQAGHCGRTCENDDLWRF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0006750 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0007370 | RBH | 0.0 | 0.0 | 0.209891 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0007140 | RBH | 0.0 | 0.0 | 0.905333 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0006790 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0010700 | RBH | 0.0 | 0.0 | 6.336389 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0184200 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0031630 | SBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0207800 | RBH | 0 | 0 | 0.010346 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0008580 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0032080 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0032080 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0013840 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0031860 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G031840 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0031690 | SBH | 0.0 | 0.0 | 0.0 |
