Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_11g0024580 | OGI:11081860 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr11:30139399-30140279 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAGGTGGCTGCTGCAAGCGCAGCTGTGAGAGGATGCTGATGAGAATCCTCCTTACATCAGGCTTCTGGGAGGAACGCACAAATGCCCAGCATTCGAACTGCCGCCGAAGCTTGCGGTACAGCTCGTTGGCGAGCGTGGTCTTGCCTATTCCTCCGACTCCTACAATGGACACCACCCTCAGCCTCTTCTGATCTTCATCATCACACGCAGTGAGCCAGTCTTCGAGCTTGTTCATGGCGACGTTGATACCGACATGAGGGACGCAGAAGTCGCGTTCCCTGAACCGCGTGGTGTGCCAACATATGGTAGAAGAAGAAGACGATGCGTCACCTGTAGCGGCAGTAGAGGAAGAAGCAGTACTGGTGGCTATGCCATTGCCACCGACGCTGCTGCAGAACATGGCATGGCGTTTGAGCGCGTCCTGGGTACGTAGGCTGAATTCTCTGATCTTGTTAGCCATCCATAACCGCTGCTTCAGCCTCTCTGGAATCCAGAGAGGAGTCGTACGCTGCCACCGCCGCCTGGTGATCTTACGGCGAGGAGGAATCCCGCCGCTGGCGGTTCGACCGCCCGCTGAACCGGCGGTGGCAGCGTGCTCGTAGTGGTCGATGCAGTCGTCGATGTCGTAGGACAGCTCGCGCACCTCCTTCGTCCAGCACCTCCTCCTCGCCCTCGTCGTCGCCGTGGCATCCTCCAGCTCCGGCGACTCGCTGTAATAGCCATTGAGTATGGAAATCATAAGATGGAGATCTCGCTTGATGAGCGGTATCTCCTCCTCGGCACCCTTGGGAAGAATGCTGCCATGGCGAAGGAGGACCCCGTCGAGCCTCCCGGGGAGGTTCAACACGGCGCCCCACAAACCACAGGTCGGTGCCTCCAT
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| CDS seq | ATGGAGGCACCGACCTGTGGTTTGTGGGGCGCCGTGTTGAACCTCCCCGGGAGGCTCGACGGGGTCCTCCTTCGCCATGGCAGCATTCTTCCCAAGGGTGCCGAGGAGGAGATACCGCTCATCAAGCGAGATCTCCATCTTATGATTTCCATACTCAATGGCTATTACAGCGAGTCGCCGGAGCTGGAGGATGCCACGGCGACGACGAGGGCGAGGAGGAGGTGCTGGACGAAGGAGGTGCGCGAGCTGTCCTACGACATCGACGACTGCATCGACCACTACGAGCACGCTGCCACCGCCGGTTCAGCGGGCGGTCGAACCGCCAGCGGCGGGATTCCTCCTCGCCGTAAGATCACCAGGCGGCGGTGGCAGCGTACGACTCCTCTCTGGATTCCAGAGAGGCTGAAGCAGCGGTTATGGATGGCTAACAAGATCAGAGAATTCAGCCTACGTACCCAGGACGCGCTCAAACGCCATGCCATGTTCTGCAGCAGCGTCGGTGGCAATGGCATAGCCACCAGTACTGCTTCTTCCTCTACTGCCGCTACAGGTGACGCATCGTCTTCTTCTTCTACCATATGTTGGCACACCACGCGGTTCAGGGAACGCGACTTCTGCGTCCCTCATGTCGGTATCAACGTCGCCATGAACAAGCTCGAAGACTGGCTCACTGCGTGTGATGATGAAGATCAGAAGAGGCTGAGGGTGGTGTCCATTGTAGGAGTCGGAGGAATAGGCAAGACCACGCTCGCCAACGAGCTGTACCGCAAGCTTCGGCGGCAGTTCGAATGCTGGGCATTTGTGCCAGCCACCTGA
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| Protein seq | MEAPTCGLWGAVLNLPGRLDGVLLRHGSILPKGAEEEIPLIKRDLHLMISILNGYYSESPELEDATATTRARRRCWTKEVRELSYDIDDCIDHYEHAATAGSAGGRTASGGIPPRRKITRRRWQRTTPLWIPERLKQRLWMANKIREFSLRTQDALKRHAMFCSSVGGNGIATSTASSSTAATGDASSSSSTICWHTTRFRERDFCVPHVGINVAMNKLEDWLTACDDEDQKRLRVVSIVGVGGIGKTTLANELYRKLRRQFECWAFVPAT |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0024580 | OsIR64_11g0024580.01 | Chr11 | 30139399 | 30140279 | - | NAM | ||
| CDS seq | ATGGAGGCACCGACCTGTGGTTTGTGGGGCGCCGTGTTGAACCTCCCCGGGAGGCTCGACGGGGTCCTCCTTCGCCATGGCAGCATTCTTCCCAAGGGTGCCGAGGAGGAGATACCGCTCATCAAGCGAGATCTCCATCTTATGATTTCCATACTCAATGGCTATTACAGCGAGTCGCCGGAGCTGGAGGATGCCACGGCGACGACGAGGGCGAGGAGGAGGTGCTGGACGAAGGAGGTGCGCGAGCTGTCCTACGACATCGACGACTGCATCGACCACTACGAGCACGCTGCCACCGCCGGTTCAGCGGGCGGTCGAACCGCCAGCGGCGGGATTCCTCCTCGCCGTAAGATCACCAGGCGGCGGTGGCAGCGTACGACTCCTCTCTGGATTCCAGAGAGGCTGAAGCAGCGGTTATGGATGGCTAACAAGATCAGAGAATTCAGCCTACGTACCCAGGACGCGCTCAAACGCCATGCCATGTTCTGCAGCAGCGTCGGTGGCAATGGCATAGCCACCAGTACTGCTTCTTCCTCTACTGCCGCTACAGGTGACGCATCGTCTTCTTCTTCTACCATATGTTGGCACACCACGCGGTTCAGGGAACGCGACTTCTGCGTCCCTCATGTCGGTATCAACGTCGCCATGAACAAGCTCGAAGACTGGCTCACTGCGTGTGATGATGAAGATCAGAAGAGGCTGAGGGTGGTGTCCATTGTAGGAGTCGGAGGAATAGGCAAGACCACGCTCGCCAACGAGCTGTACCGCAAGCTTCGGCGGCAGTTCGAATGCTGGGCATTTGTGCCAGCCACCTGA
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| Protein seq | MEAPTCGLWGAVLNLPGRLDGVLLRHGSILPKGAEEEIPLIKRDLHLMISILNGYYSESPELEDATATTRARRRCWTKEVRELSYDIDDCIDHYEHAATAGSAGGRTASGGIPPRRKITRRRWQRTTPLWIPERLKQRLWMANKIREFSLRTQDALKRHAMFCSSVGGNGIATSTASSSTAATGDASSSSSTICWHTTRFRERDFCVPHVGINVAMNKLEDWLTACDDEDQKRLRVVSIVGVGGIGKTTLANELYRKLRRQFECWAFVPAT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.312305 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0686900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45970 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0686900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024400 | RBH | 0.000000 | 29.162773 | 0.189769 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024250 | RBH | 0.0 | 2.672616 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023850 | RBH | 0.0 | 20.499672 | 0.864770 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023640 | RBH | 0.0 | 0.250670 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024190 | RBH | 0.0 | 2.872747 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0439700 | RBH | 0.012417 | 6.2325165 | 0.042705 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0016830 | SBH | 0.162466 | 0.145908 | 0.356196 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0437200 | RBH | 0.165827 | 7.2080135 | 0.327764 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024460 | RBH | 0.0 | 0.166721 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024470 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023790 | RBH | 0.0 | 25.134550 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023680 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024060 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024060 | RBH | 0.0 | 13.188508 | 0.285753 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024270 | RBH | 0.0 | 10.566753 | 0.0 |
