Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_11g0022470 | OGI:11048980 | 9/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr11:27958387-27965364 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCATAAATAGTATTTGATACTTTAATCCACTATTGGAATATCAACAATTACATGAATGTTACCTTCTGCAGGTTCATCGTTATTTAAGTATACTACTACAAGCAGTATCAAAATTTCGATATAAAAGGACTAATAACACACCAATTCTTAGATGCGGGAAGTAATGAACTTTAAAATAGCACGCACCAATTCTTAGATACGGGAAGTAATGAACTTTAAAATAACACGCACCAGTAATAAAATTTGTGGAGAATTACAATATAACGTAGTCACTCCAGTAGGTCATAATACTCATCACGGATTACTCTTGGCTTGTTAGCGAATTTTTTTGCTGCAGTTATCAGATCATCTATAATCAAGCTAGTCGTCTCACCTGCTTTGTCATTGACTCTCAGATGCACTTCTTTCAGACTTGTGAGATTGTCCATGCCAAAGAGGCCTTCCAACATTCTGAACTTCAGCTCGAGCCTTTTGAGCTTCGGCATTGCATTTTCTGAAAAACTCAGCAACGGCAGTATAGGGGCAGAGAAGCGGAGCAGCTGAAGACTCTGGAACCCATCTTGCAGTATGACAATCACCCCATCAGTGTATAGTTTGTTCTCCTCCAGAATGGCAACCAGCTCTGTGTTGTACTTTTCTGTGCTGAGTGAAAAGGTGAGAGAAAATAGGTGAGGTAAATCTTTAAGTAGCTCAAAATTATCTGTCCGCAGTGCTGTCACTGAAAGTGTTAACTTGGCGAGATCATTAAGAGCACTGATCCACTTAGGGAGCTTAAGCAATCGACCAGATAGCTCAAGTGCGTGAAGGTTTTTTGGAGGTGTGGATATAGACCCGAGCAAATCAAAGAAGTCAGAACACTCATCATCAATGGTGAGAGACTGTAGAGAGTAGCCACCAAGGTACTGTATAGCAGAGAGTAAATCTTCGAAGGCCTTGTTGTTATCGTAACACTTGTCTTTGTTAATGCCAAGCTGGTAAATGACAAGCTTTTTCAGCCCAGTAAAATTATGAAGGTTTGCTAGAACTGTTGACCCCTCAACGATCTCAATCCCTGAAAGTATGCGTAGGGCTCTCATGGTTTCATTCTTTATCTCTTCAGGTAACTTTAATGCTTTTCTTGTTATTTTGTTTCCACCAAGTATGTTACTCATCCGATTAAGCTGGCCTATAGATTTAGGAAGCTGCTCCACATTTGTCTCCCTTATGTCCAAGGTCTCTAAATATTGGAGTTGGCCGATGTATTCAGGGATTTTGTCAATGTCTGTCCTTCGGAGGCTCAAATATTTCAGAAGCAGCAATTTACTTATTTCCTTAATATGTTTCTGTTCAAAACCTGTGCAGCCTTCAAGGTCTAGAACTTGTACTAATCCAATCTTAAATGAATGAGACGGAAGTTGGTTTAAGCTTCCAAAAACAGATAGTGAGCGGAGGTGAGACAAATACATTTTCTCCACTGCTTTTCCATGGTTGGAATCAATACTTTGGAGCGATAACCGCCGGACTTTGTTGCTGTGCATTGGCACAAGCCAATGGCCACCTATCACAGTAGTGAAATTCTCTTCGTTTGACTTGGATACAATGTATTCCAAAACCATGTCATGAACCTGACAGGTTTTCACTTTTCCATTGATGCTGTGCTCCACAGGCCTAATTATCTTCCTTCTAACAAGATGATTAAAATATGACTCCGCAACATCCTCCACACTCAACCCCTGCTTCTCACTGACAAAACCTTCTGCTACCCATCGCCTTGTCAAACGCTTCCTGCTAATTTTGAAACCTTTTGGAAATATGCTTAAATAGAGTGAGCATGTCTTGAGATCAGCAGGTAAATCATTGTAGCAATAATTAAGAATCTTGGTAACCCCTTCTGGGTTCAGAGTATCTGACTTATTAAAACGAGTATCCAGCGTATCTGGAAATAGAGAGTTGCAAACATCATTCCATTTCCTCTGAGTTTTGTGTGGGTTGCAGGCTACATGACCAGCCATTGTAACAATCGCCAAAGGCAGACCTCCACATATTTCCCAGATTCTGTCAGGAGGTTTTTCATTTTTTTTCTTTTGACCAGCTTTAGTACTTCTGGATTCAGACACAACTTCCTCAAATAACATTGCAGCTTCTCTGTTGCCAAGAACTTCAATTGAATGGACCATATCCCTTCCCTTGTTTTGGTTACATGCTTTAGCAACGGCTTGAAATCTTGTGGTAACTATTATTTTACTACCAACTTTGCCTGGAGGCAAGCAAATTTTAATATTCTGCCATGTTGTTGCAGACCATATGTCATCAATTAAGAGGAGGTACCTGTCCGAATTTAACATAAGGAAAGGTCAGGAAAATGTATCATTAAAACAAACATATTTACCCAGTCTACAGAACAAACTGAAACAATTATCCAATATTTATCCAGGTTTATCTTCTGTATTATCCTCAAATAAGTTGACTGTATTACTTTGATGTTAAAACAAGACAACAATTCATTTGTTGCTACTACTTACTAGAGTATCAGAAAGAAGTCCATTTCATGTAAACATGCAGTTCAACATGGTTATTGCACTTGAAGACAATCCTTTCCTCCCTAATATTCTCTATTTTTTCTTAGTCGGTGCTGAAAGATGGGACCATGGGAGCAACACGGTACTGATAAAAGACCATTCTCAGTGTATACCTCAACAAACAACAAGGGATTTTACAGTCCTTAATAGGCATTTTGCTGAGATAGTGGCATTTTGTATCCAACAAGGGAGGTGTAGAGAGGTAGTGGCATTTTGTAGTGTTAATCATGAGGTACAATACCTTTACTGAGAAGTATCTGACTTCTGATTAACACAATAAATGCATATACCTCGCAAAAACCTCACAAAGACTGGAAAATAACTCCACAATAGCATATCCAAAACAAAGAAATGGACACTTAGGTCCAACTGTTCAGTGGCTCAGTAACCAGATCACAGCATGCTGGGCCAAGCATCAAATTGAAGAAAAACAATGTATAAATCCTTAGTTTTTATGATTTTATACAATACATTTAACAGCCTAAATGTTCTGCCTTTTATATAACTAGGAAGGAAGCCCGCGCAGATGCGCGGGTAATTTATTTATTGTTTATAAAACAATGCTAAAAGAGTCCTACCTCACCATATTCACTATAAAGATAGTAGAATACCTTATAATAAAAAAAGAAATATTTATACCGTGAAAGAGACCATAGATTTTGATAAGAGTGTCTATCATATTCAAACAAAAATCACTTTGTCCCAGTTATGTGTAAACTTGCCTATCACGACAACTTATTATCATTGTCATAAAAGCTGGGTGTCTTTTTAATAGATGAAAATACATTTGTACACAAAAATAAACCTAATGCATTGTTAATACAATAAAAAATTCATCTCCACTTCATACCAAGTGCCAATGTCTCATTTGTGTTCAAGTATATGCCTAAATATTTAAAATTACTGTATCTACCAATTAATGGGATAAAACCATTAAAATTAGATATAATGTCCTCTAGTGGTGAAGCCGACCGTAACCACCAAAGTTTTCTTTTTTGATGGCTTGAAACATGGGTTCCGTGTTTTGCCGTGCCCCTCAATATCAGCATGGAGCAAAATTTTAATGCTTAGTTCACTATCAGGACACTCATAAAGAGTTGAGCTTTATTGCCATCAGCGGGCTCTCATTGGGGCAACGTCGGCTCACCCATATGAAAACCTAGCAAACTCTGTTGTCCATGCTTGGCTCTTTTGGGAATGACAGAGACGAGATGGAGGTGATGAAAATATCTTTTAAAAAAAAAATAGACGATTTGTGATATAGAGTAGACACAATTTGTTTATTTGTTTATGTTGTTAATTGATACTACTGAATTTTAGTGGTACAGATACGATTTTCTCTTGTAAAAATGATTAAGTAGGATTGATCATTCAACACTACTTAAAAAACTAATATCTTCAGTGCTGATAACAACGTAGAAAAATATTTATTCAAGTAGTAATCCTTCACAAACATATGGGTTAATATGGGTTTTGATATTGTTTTCCTTGTACTATGGAGCTAATTCACCTATCCATGTTAGTCGGGTAATATACGATGGAATAATCCATGTTTTCAAATTTTCGTAAGGTAATATAAGATGGAATAATCTATATTGTAAAATTTATTTGTGCTGATTGTTAAGACTATTTCGGATGAGAGTGACTTCCATGTGATTTTTTTTTAATCAAGACATAGTTAACATATTTATAAATTTCCTACGTAAAATACAAGTGGTCAAGGTTTATAAATGAATATAATGCGTGTGGTTAGTTATTTTAAAAAAGGTAGTAATAGTTACGATTATTTGACGAGAAAGACATTAAAAAAGGCTAGAATATTATCCCATGTGATATTTTTAAAAAATATAGTTAACATAGGATATAATACGTATGCATAAATATAATAAAGTTTTAATCTTTAATTTTAGGATTAGGAGCGAAGGATTAATATAATTTCTTTTCAAGCATACAACGTATGTATGATCTTCTCAGTGAATATTAGTATCCCATACGTAAGTTTTACAGCTTTTTGTTTTTTACGAATTGTACGTATTTTTTTCTCGTAGGTACACATGAACCGGGCTTCGATGACTACATCCCTCCTAATCACACAGCATGTAATCGATCTCCATGTTGGTAATAGCATCGATGAAGTACGCTCGGATAGTTACTCACACTAAAGTATGTTTGCGAAAAACTACGTTTGCATATGGGCACTATGGATCTTTAATTAATATTTTAATTTTAAATAAAACAATGATTTTGATATATTCAAAATCTAATATGCGGTTTAAAAGTTATAATGATAAATTTGAATGAAACATATAACAAAATAATTTATTTTATTTTAAATTTTATATCTTGAAAATAGGGGAGAGTAGAGGCTAGGTAGCAAAGGTCGTGCGTACGTGTGGGAAGAGATCCCCACACACAGGGACGGAATGGGCATACGTCTGGTTTAGCATCTGTTTTGTTTGTTGTAGATCATCTAATCTAATCTCACGGTGCAGGTTACTAGACCCACTAATATAAGTGAAAATCAAGGGATGGATGCTTTGTTTTTTTCTCATAATTTCTTAATTTTTCCCTAATTTATTAGAGCGCCACGTGGCATCTTAGAAGCATTTATAGGAAATTTAATGGACTTTTAGTATATAATAGATGGCGGTTAGAAGGATAAAAAACAAATATATAATAAGATATCAAGAAACAAAAAATAATTGAATTCGAATGAACAAAACAAAAAACTCTGATTATTATGTTTAATCTTGTAGTTTTTGCCTGAAGAGAAAAGGAGATGTACCTATTGTTACCCAAGTGCACCTTCAGCTCATCTACAAGTTCGTCATGCTCACTTCTTCTGCCATGTTGCTTGCTGTAACCAGCACATGGCAAGGCTTGCACCAAAGTGTTTTTAAACAATGTTATAAAGGGTTTTTTCTCTGAGTTTCCTTGACCATTGTTGCTACCACTATCTCTCTTGTTTCCTACATAGTTGCTATGGGTCCATTGCATTTCCTCCAAGCTGCCCTTGTCACCCCTGCCTTCATGGCCACTGCTGCTACGCAAGTTGTGGCTATGGATCCGCTCCATGACACGGTTAATTTTATCTACGCTATCATTGCCACGACCTCCATCACGGGCATTGCTGTCCTGTTGCTCAATATCACGGGTCCTCGCCACTTTATCTTTTTCCACCAAGCTCCCTTCATCGTTGTCCCTTTTCTGCTTCGGATCATCCGAGCACAGCTTGACTGGGCACAATATGATTTTGAGGAAATTGTGTCTAGCCTTGGAGATAGCACCATGGCTAACTTCCTGCCCATGATTGGTGGCTTCTGGCTTCACTTGATCCAATATTTTCTTGAGAATTGCGTCCACGTCAGAGCCTTGGGATACTGTGACCATTGCACGGCGATCAAATTGATCACCATATTTGCGGTACAGCGCCATGGCAATAGTAGTCTTCCCCACACCGCCGAATCCAGAGATGGATAGAACCCCCATTTCCTTGTTGATGTCAGTTACCCACTTTTTCAGTTCCTTATTTTTATCCATCCCCACGGGCTCCTTGGTGCCTATCAGCTGAGCTGTTGCCAACTGATCCTCAGCTGCATCAAACCCAATGGATCGTCCGGCGGTGCCACTCCCGCTGGATTCCGGATTTTTGACGCCATACCTGGTGCGCCGTTCACCAACGTGCTGCGCCCGGTTCTTTAGGTCAGCGATCTCTCCAGCAATGTCGCGGCGGGTGCAGCAAGTCCAGAGCTCGCGTATACTCATGCGGATCTTGGCGAGGCACCCGCTGGCCCGGGGATCGTCGGGGAGGCGGCGGATGAGGTCGTCGATGCAGTCCTCGATGTCGTAGGCGATGTCGCGGACCTGCTTCATCCAGTCCCTGGTCTGCGCGTCGTGGTCGTCGCCGCCGGCGGCGCCGAGGTTGACGAGGAAGGCCTGCATGCTGGCCAGCTCGTCGTTGATGTACTGGATGTCGCCGCGGACGCCCCTGACGACGGCGTACTCCCGGGCCAGGAGGTCGCCCAGCTTGCCCAGGATGGCCTTCATGGTGGCCTGCGACGCGCCGACCACGAGCTCCATTGCGGCGGCGCTCCTCCTCCACGATGCAAATACGCAGATATTCGCCTCGACTTGGCCCCGGGGGAGGCGATTGGATCTGCGGGAAACGGCGAGCGGTGAGGTGAGTGCGGAAATGGGGGATTCTTGCAATTTTCTCATTCTACGTCGTCGCACAAATCGATCAAAAACAGCAAGATTCAAAGATGCGATACCTGATGGTAAGCAGTAGTGATGGATGCGCGCACGATTCGACTCCCGATTTGATCGATCGAAAGGGGCGCGGCGATGTCTGTCCGCCCCGGACCCGGAGATCTAGCTCCGCTTCCTGAGAGTGGACTCTCCTCAGTGGAGTCAGTGTGGA
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| CDS seq | ATGGAGCTCGTGGTCGGCGCGTCGCAGGCCACCATGAAGGCCATCCTGGGCAAGCTGGGCGACCTCCTGGCCCGGGAGTACGCCGTCGTCAGGGGCGTCCGCGGCGACATCCAGTACATCAACGACGAGCTGGCCAGCATGCAGGCCTTCCTCGTCAACCTCGGCGCCGCCGGCGGCGACGACCACGACGCGCAGACCAGGGACTGGATGAAGCAGGTCCGCGACATCGCCTACGACATCGAGGACTGCATCGACGACCTCATCCGCCGCCTCCCCGACGATCCCCGGGCCAGCGGGTGCCTCGCCAAGATCCGCATGAGTATACGCGAGCTCTGGACTTGCTGCACCCGCCGCGACATTGCTGGAGAGATCGCTGACCTAAAGAACCGGGCGCAGCACGTTGGTGAACGGCGCACCAGGTATGGCGTCAAAAATCCGGAATCCAGCGGGAGTGGCACCGCCGGACGATCCATTGGGTTTGATGCAGCTGAGGATCAGTTGGCAACAGCTCAGCTGATAGGCACCAAGGAGCCCGTGGGGATGGATAAAAATAAGGAACTGAAAAAGTGGGTAACTGACATCAACAAGGAAATGGGGGTTCTATCCATCTCTGGATTCGGCGGTGTGGGGAAGACTACTATTGCCATGGCGCTGTACCGCAAATATGGTGATCAATTTGATCGCCGTGCAATGGTCACAGTATCCCAAGGCTCTGACGTGGACGCAATTCTCAAGAAAATATTGGATCAAGTGAAGCCAGAAGCCACCAATCATGGGCAGGAAGTTAGCCATGGTGCTATCTCCAAGGCTAGACACAATTTCCTCAAAATCATATTGTGCCCAGTCAAGCTGTGCTCGGATGATCCGAAGCAGAAAAGGGACAACGATGAAGGGAGCTTGGTGGAAAAAGATAAAGTGGCGAGGACCCGTGATATTGAGCAACAGGACAGCAATGCCCGCAAAGTTGGTAGTAAAATAATAGTTACCACAAGATTTCAAGCCGTTGCTAAAGCATGTAACCAAAACAAGGGAAGGGATATGGTCCATTCAATTGAAGTTCTTGGCAACAGAGAAGCTGCAATGTTATTTGAGGAAGTTGTGTCTGAATCCAGAAGTACTAAAGCTGGTCAAAAGAAAAAAAATGAAAAACCTCCTGACAGAATCTGGGAAATATGTGGAGGTCTGCCTTTGGCGATTGTTACAATGGCTGGTCATGTAGCCTGCAACCCACACAAAACTCAGAGGAAATGGAATGATGTTTGCAACTCTCTATTTCCAGATACGCTGGATACTCGTTTTAATAAGTCAGATACTCTGAACCCAGAAGGGGTTACCAAGATTCTTAATTATTGCTACAATGATTTACCTGCTGATCTCAAGACATGCTCACTCTATTTAAGCATATTTCCAAAAGGTTTCAAAATTAGCAGGAAGCGTTTGACAAGGCGATGGGTAGCAGAAGGTTTTGTCAGTGAGAAGCAGGGGTTGAGTGTGGAGGATGTTGCGGAGTCATATTTTAATCATCTTGTTAGAAGGAAGATAATTAGGCCTGTGGAGCACAGCATCAATGGAAAAGTGAAAACCTGTCAGGTTCATGACATGGTTTTGGAATACATTGTATCCAAGTCAAACGAAGAGAATTTCACTACTGTGATAGGTGGCCATTGGCTTGTGCCAATGCACAGCAACAAAGTCCGGCGGTTATCGCTCCAAAGTATTGATTCCAACCATGGAAAAGCAGTGGAGAAAATGTATTTGTCTCACCTCCGCTCACTATCTGTTTTTGGAAGCTTAAACCAACTTCCGTCTCATTCATTTAAGATTGGATTAGTACAAGTTCTAGACCTTGAAGGCTGCACAGGTTTTGAACAGAAACATATTAAGGAAATAAGTAAATTGCTGCTTCTGAAATATTTGAGCCTCCGAAGGACAGACATTGACAAAATCCCTGAATACATCGGCCAACTCCAATATTTAGAGACCTTGGACATAAGGGAGACAAATGTGGAGCAGCTTCCTAAATCTATAGGCCAGCTTAATCGGATGAGTAACATACTTGGTGGAAACAAAATAACAAGAAAAGCATTAAAGTTACCTGAAGAGATAAAGAATGAAACCATGAGAGCCCTACGCATACTTTCAGGGATTGAGATCGTTGAGGGGTCAACAGTTCTAGCAAACCTTCATAATTTTACTGGGCTGAAAAAGCTTGTCATTTACCAGCTTGGCATTAACAAAGACAAGTGTTACGATAACAACAAGGCCTTCGAAGATTTACTCTCTGCTATACAGTACCTTGGTGGCTACTCTCTACAGTCTCTCACCATTGATGATGAGTGTTCTGACTTCTTTGATTTGCTCGGGTCTATATCCACACCTCCAAAAAACCTTCACGCACTTGAGCTATCTGGTCGATTGCTTAAGCTCCCTAAGTGGATCAGTGCTCTTAATGATCTCGCCAAGTTAACACTTTCAGTGACAGCACTGCGGACAGATAATTTTGAGCTACTTAAAGATTTACCTCACCTATTTTCTCTCACCTTTTCACTCAGCACAGAAAAGTACAACACAGAGCTGGTTGCCATTCTGGAGGAGAACAAACTATACACTGATGGGGTGATTGTCATACTGCAAGATGGGTTCCAGAGTCTTCAGCTGCTCCGCTTCTCTGCCCCTATACTGCCGTTGCTGAGTTTTTCAGAAAATGCAATGCCGAAGCTCAAAAGGCTCGAGCTGAAGTTCAGAATGTTGGAAGGCCTCTTTGGCATGGACAATCTCACAAGTCTGAAAGAAGTGCATCTGAGAGTCAATGACAAAGCAGGTGAGACGACTAGCTTGATTATAGATGATCTGATAACTGCAGCAAAAAAATTCGCTAACAAGCCAAGAGTAATCCGTGATGAGTATTATGACCTACTGGAGTGA
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| Protein seq | MELVVGASQATMKAILGKLGDLLAREYAVVRGVRGDIQYINDELASMQAFLVNLGAAGGDDHDAQTRDWMKQVRDIAYDIEDCIDDLIRRLPDDPRASGCLAKIRMSIRELWTCCTRRDIAGEIADLKNRAQHVGERRTRYGVKNPESSGSGTAGRSIGFDAAEDQLATAQLIGTKEPVGMDKNKELKKWVTDINKEMGVLSISGFGGVGKTTIAMALYRKYGDQFDRRAMVTVSQGSDVDAILKKILDQVKPEATNHGQEVSHGAISKARHNFLKIILCPVKLCSDDPKQKRDNDEGSLVEKDKVARTRDIEQQDSNARKVGSKIIVTTRFQAVAKACNQNKGRDMVHSIEVLGNREAAMLFEEVVSESRSTKAGQKKKNEKPPDRIWEICGGLPLAIVTMAGHVACNPHKTQRKWNDVCNSLFPDTLDTRFNKSDTLNPEGVTKILNYCYNDLPADLKTCSLYLSIFPKGFKISRKRLTRRWVAEGFVSEKQGLSVEDVAESYFNHLVRRKIIRPVEHSINGKVKTCQVHDMVLEYIVSKSNEENFTTVIGGHWLVPMHSNKVRRLSLQSIDSNHGKAVEKMYLSHLRSLSVFGSLNQLPSHSFKIGLVQVLDLEGCTGFEQKHIKEISKLLLLKYLSLRRTDIDKIPEYIGQLQYLETLDIRETNVEQLPKSIGQLNRMSNILGGNKITRKALKLPEEIKNETMRALRILSGIEIVEGSTVLANLHNFTGLKKLVIYQLGINKDKCYDNNKAFEDLLSAIQYLGGYSLQSLTIDDECSDFFDLLGSISTPPKNLHALELSGRLLKLPKWISALNDLAKLTLSVTALRTDNFELLKDLPHLFSLTFSLSTEKYNTELVAILEENKLYTDGVIVILQDGFQSLQLLRFSAPILPLLSFSENAMPKLKRLELKFRMLEGLFGMDNLTSLKEVHLRVNDKAGETTSLIIDDLITAAKKFANKPRVIRDEYYDLLE |
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| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0022470 | OsIR64_11g0022470.01 | Chr11 | 27958581 | 27965024 | - | NAM | ||
| CDS seq | ATGGAGCTCGTGGTCGGCGCGTCGCAGGCCACCATGAAGGCCATCCTGGGCAAGCTGGGCGACCTCCTGGCCCGGGAGTACGCCGTCGTCAGGGGCGTCCGCGGCGACATCCAGTACATCAACGACGAGCTGGCCAGCATGCAGGCCTTCCTCGTCAACCTCGGCGCCGCCGGCGGCGACGACCACGACGCGCAGACCAGGGACTGGATGAAGCAGGTCCGCGACATCGCCTACGACATCGAGGACTGCATCGACGACCTCATCCGCCGCCTCCCCGACGATCCCCGGGCCAGCGGGTGCCTCGCCAAGATCCGCATGAGTATACGCGAGCTCTGGACTTGCTGCACCCGCCGCGACATTGCTGGAGAGATCGCTGACCTAAAGAACCGGGCGCAGCACGTTGGTGAACGGCGCACCAGGTATGGCGTCAAAAATCCGGAATCCAGCGGGAGTGGCACCGCCGGACGATCCATTGGGTTTGATGCAGCTGAGGATCAGTTGGCAACAGCTCAGCTGATAGGCACCAAGGAGCCCGTGGGGATGGATAAAAATAAGGAACTGAAAAAGTGGGTAACTGACATCAACAAGGAAATGGGGGTTCTATCCATCTCTGGATTCGGCGGTGTGGGGAAGACTACTATTGCCATGGCGCTGTACCGCAAATATGGTGATCAATTTGATCGCCGTGCAATGGTCACAGTATCCCAAGGCTCTGACGTGGACGCAATTCTCAAGAAAATATTGGATCAAGTGAAGCCAGAAGCCACCAATCATGGGCAGGAAGTTAGCCATGGTGCTATCTCCAAGGCTAGACACAATTTCCTCAAAATCATATTGTGCCCAGTCAAGCTGTGCTCGGATGATCCGAAGCAGAAAAGGGACAACGATGAAGGGAGCTTGGTGGAAAAAGATAAAGTGGCGAGGACCCGTGATATTGAGCAACAGGACAGCAATGCCCGCAAAGTTGGTAGTAAAATAATAGTTACCACAAGATTTCAAGCCGTTGCTAAAGCATGTAACCAAAACAAGGGAAGGGATATGGTCCATTCAATTGAAGTTCTTGGCAACAGAGAAGCTGCAATGTTATTTGAGGAAGTTGTGTCTGAATCCAGAAGTACTAAAGCTGGTCAAAAGAAAAAAAATGAAAAACCTCCTGACAGAATCTGGGAAATATGTGGAGGTCTGCCTTTGGCGATTGTTACAATGGCTGGTCATGTAGCCTGCAACCCACACAAAACTCAGAGGAAATGGAATGATGTTTGCAACTCTCTATTTCCAGATACGCTGGATACTCGTTTTAATAAGTCAGATACTCTGAACCCAGAAGGGGTTACCAAGATTCTTAATTATTGCTACAATGATTTACCTGCTGATCTCAAGACATGCTCACTCTATTTAAGCATATTTCCAAAAGGTTTCAAAATTAGCAGGAAGCGTTTGACAAGGCGATGGGTAGCAGAAGGTTTTGTCAGTGAGAAGCAGGGGTTGAGTGTGGAGGATGTTGCGGAGTCATATTTTAATCATCTTGTTAGAAGGAAGATAATTAGGCCTGTGGAGCACAGCATCAATGGAAAAGTGAAAACCTGTCAGGTTCATGACATGGTTTTGGAATACATTGTATCCAAGTCAAACGAAGAGAATTTCACTACTGTGATAGGTGGCCATTGGCTTGTGCCAATGCACAGCAACAAAGTCCGGCGGTTATCGCTCCAAAGTATTGATTCCAACCATGGAAAAGCAGTGGAGAAAATGTATTTGTCTCACCTCCGCTCACTATCTGTTTTTGGAAGCTTAAACCAACTTCCGTCTCATTCATTTAAGATTGGATTAGTACAAGTTCTAGACCTTGAAGGCTGCACAGGTTTTGAACAGAAACATATTAAGGAAATAAGTAAATTGCTGCTTCTGAAATATTTGAGCCTCCGAAGGACAGACATTGACAAAATCCCTGAATACATCGGCCAACTCCAATATTTAGAGACCTTGGACATAAGGGAGACAAATGTGGAGCAGCTTCCTAAATCTATAGGCCAGCTTAATCGGATGAGTAACATACTTGGTGGAAACAAAATAACAAGAAAAGCATTAAAGTTACCTGAAGAGATAAAGAATGAAACCATGAGAGCCCTACGCATACTTTCAGGGATTGAGATCGTTGAGGGGTCAACAGTTCTAGCAAACCTTCATAATTTTACTGGGCTGAAAAAGCTTGTCATTTACCAGCTTGGCATTAACAAAGACAAGTGTTACGATAACAACAAGGCCTTCGAAGATTTACTCTCTGCTATACAGTACCTTGGTGGCTACTCTCTACAGTCTCTCACCATTGATGATGAGTGTTCTGACTTCTTTGATTTGCTCGGGTCTATATCCACACCTCCAAAAAACCTTCACGCACTTGAGCTATCTGGTCGATTGCTTAAGCTCCCTAAGTGGATCAGTGCTCTTAATGATCTCGCCAAGTTAACACTTTCAGTGACAGCACTGCGGACAGATAATTTTGAGCTACTTAAAGATTTACCTCACCTATTTTCTCTCACCTTTTCACTCAGCACAGAAAAGTACAACACAGAGCTGGTTGCCATTCTGGAGGAGAACAAACTATACACTGATGGGGTGATTGTCATACTGCAAGATGGGTTCCAGAGTCTTCAGCTGCTCCGCTTCTCTGCCCCTATACTGCCGTTGCTGAGTTTTTCAGAAAATGCAATGCCGAAGCTCAAAAGGCTCGAGCTGAAGTTCAGAATGTTGGAAGGCCTCTTTGGCATGGACAATCTCACAAGTCTGAAAGAAGTGCATCTGAGAGTCAATGACAAAGCAGGTGAGACGACTAGCTTGATTATAGATGATCTGATAACTGCAGCAAAAAAATTCGCTAACAAGCCAAGAGTAATCCGTGATGAGTATTATGACCTACTGGAGTGA
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| Protein seq | MELVVGASQATMKAILGKLGDLLAREYAVVRGVRGDIQYINDELASMQAFLVNLGAAGGDDHDAQTRDWMKQVRDIAYDIEDCIDDLIRRLPDDPRASGCLAKIRMSIRELWTCCTRRDIAGEIADLKNRAQHVGERRTRYGVKNPESSGSGTAGRSIGFDAAEDQLATAQLIGTKEPVGMDKNKELKKWVTDINKEMGVLSISGFGGVGKTTIAMALYRKYGDQFDRRAMVTVSQGSDVDAILKKILDQVKPEATNHGQEVSHGAISKARHNFLKIILCPVKLCSDDPKQKRDNDEGSLVEKDKVARTRDIEQQDSNARKVGSKIIVTTRFQAVAKACNQNKGRDMVHSIEVLGNREAAMLFEEVVSESRSTKAGQKKKNEKPPDRIWEICGGLPLAIVTMAGHVACNPHKTQRKWNDVCNSLFPDTLDTRFNKSDTLNPEGVTKILNYCYNDLPADLKTCSLYLSIFPKGFKISRKRLTRRWVAEGFVSEKQGLSVEDVAESYFNHLVRRKIIRPVEHSINGKVKTCQVHDMVLEYIVSKSNEENFTTVIGGHWLVPMHSNKVRRLSLQSIDSNHGKAVEKMYLSHLRSLSVFGSLNQLPSHSFKIGLVQVLDLEGCTGFEQKHIKEISKLLLLKYLSLRRTDIDKIPEYIGQLQYLETLDIRETNVEQLPKSIGQLNRMSNILGGNKITRKALKLPEEIKNETMRALRILSGIEIVEGSTVLANLHNFTGLKKLVIYQLGINKDKCYDNNKAFEDLLSAIQYLGGYSLQSLTIDDECSDFFDLLGSISTPPKNLHALELSGRLLKLPKWISALNDLAKLTLSVTALRTDNFELLKDLPHLFSLTFSLSTEKYNTELVAILEENKLYTDGVIVILQDGFQSLQLLRFSAPILPLLSFSENAMPKLKRLELKFRMLEGLFGMDNLTSLKEVHLRVNDKAGETTSLIIDDLITAAKKFANKPRVIRDEYYDLLE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0022470 | OsIR64_11g0022470.02 | Chr11 | 27958387 | 27965364 | - | IsoSeq | ||
| CDS seq | CACACTGACTCCACTGAGGAGAGTCCACTCTCAGGAAGCGGAGCTAGATCTCCGGGTCCGGGGCGGACAGACATCGCCGCGCCCCTTTCGATCGATCAAATCGGGAGTCGAATCGTGCGCGCATCCATCACTACTGCTTACCATCAGATCCAATCGCCTCCCCCGGGGCCAAGTCGAGGCGAATATCTGCGTATTTGCATCGTGGAGGAGGAGCGCCGCCGCAATGGAGCTCGTGGTCGGCGCGTCGCAGGCCACCATGAAGGCCATCCTGGGCAAGCTGGGCGACCTCCTGGCCCGGGAGTACGCCGTCGTCAGGGGCGTCCGCGGCGACATCCAGTACATCAACGACGAGCTGGCCAGCATGCAGGCCTTCCTCGTCAACCTCGGCGCCGCCGGCGGCGACGACCACGACGCGCAGACCAGGGACTGGATGAAGCAGGTCCGCGACATCGCCTACGACATCGAGGACTGCATCGACGACCTCATCCGCCGCCTCCCCGACGATCCCCGGGCCAGCGGGTGCCTCGCCAAGATCCGCATGAGTATACGCGAGCTCTGGACTTGCTGCACCCGCCGCGACATTGCTGGAGAGAT
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| Protein seq | HTDSTEESPLSGSGARSPGPGRTDIAAPLSIDQIGSRIVRASITTAYHQIQSPPPGPSRGEYLRICIVEEERRRNGARGRRVAGHHEGHPGQAGRPPGPGVRRRQGRPRRHPVHQRRAGQHAGLPRQPRRRRRRRPRRADQGLDEAGPRHRLRHRGLHRRPHPPPPRRSPGQRVPRQDPHEYTRALDLLHPPRHCWRD |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.101046 | 0.720416 | 0.426970 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0687900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g39260 | SBH | 0.0 | 0.012340 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0687900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0022040 | RBH | 0.592494 | 10.638247 | 3.385752 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022030 | RBH | 0.121768 | 1.749102 | 1.113316 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0019750 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023750 | SBH | 0.031370 | 0.014365 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024310 | SBH | 8.393654 | 11.443207 | 12.636646 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0391900 | SBH | 1.0437075 | 4.5810225 | 2.736945 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0022860 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0412900 | SBH | 0.0047 | 0.3506275 | 0.140692 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024840 | RBH | 0.090633 | 0.205190 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022340 | RBH | 0.171674 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023860 | SBH | 3.115633 | 4.969689 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023770 | SBH | 0.237856 | 0.0 | 0.151067 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024140 | SBH | 0.323227 | 4.796237 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G019590 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0022300 | RBH | 0.259339 | 14.287988 | 2.330554 |
