Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_11g0014260 | OGI:11049760 | 1/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr11:18802832-18808843 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCCTCGCGCCTTCCTCTCTCTCTCTCTCCTCGCTTCCCCGCGCCGCCGCCGCCGCCGCCTGAGCTCGGCGGCAGCAGGGGGACGATAGGTGGTGTGGTGCTTTGCTCCGGCGCAGCGTGCTGCTGATCGCGCGCGCGATGCCCGCGTGGTGGCCACGGAAGTCGAGGTCGAAGGCGAAGGGCGTGGGGAAGCCCCCCGGGGCAGGGGCGGCCTCCGCGGCGTCGTCCCCGCGCAAGTCGCTCGACCTCGTTGACCTCTCCGCCTCCCCCTCGGTGACCCCCCGGGCGAGGGAGAAGGCGCGCAGCCTCGACTCGCCGTCGGCCGCCGCGCCGCGGCATGGGGGCGGGCGGTGTGGTGGGGGGTTCGGGGAGGTCGGGTACAAGCTCCCCGTGCCCGTGGGTGACGCGGGGCCGGGGGGGCAGGGGCAGGGGCAGGAGCCGGAGTTGGAGCCGGCTCCTGTAAGGTTCGAGGAGAACGGGGATGTGGTGGGCGGCGTCGCCGGCGACGCCTCGTCGGAGGAGTTGAGCGTGTGCTCGCATGATTCGTCGGACGAGGCGACGGATCAGCAAGTATGTAGGTAAGTGTGCGATCGTGGAATACCTCAGCCTGTTCGATTTCTATTTCTCGGGGGGTGCAACGTGCAATTCCAGATATATAGGTATTGTGATCAAAATTTGGGGAATTTCATGATCTGATAAGCGTAGCATGTAGGCTTCGTGCGTTACTTTCCCCACTAATTTCGTGTGAATGGCTTTACTCGGCTTTGCTACTTGCTTTTAAGTGTTCCTAGTCAAGTGCAGAGTTGGGGACGTGATGAATGAACAGTGTGGCTTCGTACCAACTCTACAAGTTGACCTTTTCCCATGGTCGTTTCAGATTACTTCCAGTTCGGGAATCCTAAGCCATTTATTTTTCTTTTCTCTGCTAAATATGTATTGCACACAGGATTACTCGGGACGCTAAGGTGTGTTAATGGTTGGACAAAGAATTTTAAAAAGGCTGAATAGTTGTTTCTTTTGTTGCCCTGGAGTCACCATTCTGTTGAAACGTGTATTTGGTTCTTGTGCTAAATCATTGACGTTCTCTCAACAATAATGTACAGTGCTTTTCGTTAATCATTATGCTCTGAACTTAATTTGACAACTTCTTTGAGTTGGACAATTTGAGAACTTTTTGAAGTATATAAATTCATATGACGTGCCTATGTTTAGGGGTACTTAAATTAGCGTATTGTTCCACAGCACATTGTTACAGTATTTATATATTTCATTTCAAAATTTGTGTTGATATAATATCTGATGATTCTTGGCTGCTTGGTGTAATTTCTAGGTCTACGGATCCGGCGTCTTTTGTCAGGGGAAGAAATATGCCATCTGACTCACATAAGATCCTAAATGAAGACAATCATTTCATGTCCTATAGCATGCCACGGGAGCATCGGAAGTTCTTCGAGGTTCCTGTCACTAATATGGGAGAACTTCATTTGCATTGTGATGATCTGTCAACTAGCGAAACTAGTTCACGTGGCAGAATGTTGCCCGAGGATTTTCTTGCTCCAAGAACAAGAAGCCTCTCCCCTGGACCGAAAGGCCATACTTTTGCTGTAAATAATGTAAATTCAAGGGAATTTGGTTTTAGTCCAAGGTCACCAGTAAAAATGATGGATGGATTGAAGAGCCCACCTCATCCTTTACCTCTTCCTCCAGGTCCTGCTACTTGTTCACCTCTTCCCCCATCTCCCACTGCTTACTCGCCTCACCCTCTAGGTCCCACTACTTGCTTGCAATCCGAATCACAATGGAAAAAAGGCAAATTGTTAGGGAGCGGTACATTTGGCCAGGTTTACCTTGGATTTAACAGGTATTGGAATCTTTCTATAGTTTGGCATTATTGTATTTTGGTATTACAATTTTGTATATGATGCATTGATTCCGCATTGAAAGCAATAATCCCTCGCGGAGTATATGATAAATTTTCATATTCCATTATTTGGGGTAATGAACTCAACAGTGAGATTAAGTGGCATCAGTTATTTTGCTGAATTTTATGGTGCCAAGGTCTTGATATGTACAGCAATTTGTACAAGAATTTGGTATATTCTGTGAGGTTGTGGTATTACCTAAATTTGTCCAATAGCAATTTGTGGTAGCATTCTTAGTTTATGATGAATCATGCAGTGAAAATGGGCAGTTCTGTGCGATTAAGGAGGTCCAAGTTATTTCGGATGATCCACATTCAAAAGAACGACTCAAGCAATTGAATCAGGTTATTTCTCAGTTTAATCAGTATGAATATCTTTTGATGAGTAGTAACAGCATTTGTGTCTCTTGTTCAATGGACTCACTGACATATTAATTCACTCGGGCATTAACAGGAAATAGATATGCTTAGGCAACTTTCGCACCCAAACATTGTGCAGTACTATGGAAGTGAGATGGTAAGCTTTACTTGATAAACAATTGCATTTATCTCTGTGCAACTATATATAACTTCAATACATGTTTGTAACTACCATGTTGTCTGTTACATGCATGACTTGTGATGTAACTGACGTATGAAGATTACAAAAAAAAGCCTGTGTCTTAAAGCAAAATGATTATTGTGATGACTAGAGCCAGATCCAGATAATTAACAGCATTTAGTTTGGTTGGTTCGCGTTTACAAATCACTATCCTGATCAATGAAACTTGCAAGAGGTTGTTACATGTATAAGTGTAAGCGTGTCTGGAAGGATGAAGAAAACATCAGCATTTAATTGTTTATTATGTATGAGTAGTAACGCATTTCATTTTTACTTTTTAGTCTATCTTTTGAATTTAGATAATTAAATTGTTCGATTTCCTGTCACCTCTTCTGCTGTGCTACTAATATAAGATTTTTGCTGTTATTTCCTCTCACTTGGTTTGCATTTTTTACTTCTTTATTTTCCCTCTCAGAAGAAAATTCTCTGGTTTCTTGTTTAGTTCTCATCTTTTGTTCGAAGCACTTCAGAAAGTAGAAAGTACTTTGTGTTGCTTATACTTTCTAATTCTGTATGTTTTTCCATGCAGACTGATGATGCACTTTCAATTTATCTGGAGTTTGTTTCTGGGGGCTCAATTCATAAATTACTTAGAGAGTATGGTCCTTTTAAGGAACCTGTGATCCGTAATTACACTGGACAAATTCTCTCTGGTCTTGCCTACTTGCATGGGAGGAACACTGTCCACAGGTAGTACAGATTATCCACAGTTGTTTTACATTCCTTTGGTAGTAAAAGAAATACCTTAACCACTTCATCCTGTTTCTCTTCGCAGAGATATTAAAGGTGCTAACATACTTGTCGGCCCTAATGGTGAAGTCAAACTTGCTGACTTTGGCATGGCTAAGCATGTATGCATTTTTTTTTTCTTTTCCATCCCCTGACCTGTGTGTGCAGCATCATGTAGTCTTATCGTCTTAAAATTTGGTCGCAACATCCCTTTTGGTTCAATACCTTTAACATTGAAATGTTGCCAATGCATCTTATAATAATTCTAAAAGAGAAATGTTTTCCTAAAAGATAACTTTGTTGTTTCTAAATGCTGCTGAATTTATCTGTCGGGTTTAATTTCTTAAGCATCCATGTTGTTTCCTTTTTGGGAAGGCATAGAAGCACATTCCAATTCCATTTCCTTCATGAAGCTACATTTAATTTACTTCTCCTTACTCATAAGTAGAAAAGGATTCTGTGGAAGTTTGAAGATAGTTGATATCTATTCCCAGATGATAAGTTTGATGGTTGTCTGGTTGATGTGTTTTGCGTTAGTACATGCACATATATCTACAGAAGTTTTCGGGTCCTTTTGATGTCTATTATTGCTAGTTCACGACTACAAGAGAATATACACAATACTACTGTAGCTTGTATCCCCCCCCCCCCCCCACCCCTCCTCTTTTAAGCCTTTAATTTCATTACTTACGTTTGACACAGATATCATCTTTTGCTGAAATACGCTCTTTCAAAGGAAGTCCTTACTGGATGGCTCCTGAGGTAAATTGTTTTTCTAACAGTAAACCTTTATATACCGTATTTATCATCATCTTTATATGATTCTGAATTCTCCTAATGATTGTAACATGCAGGTTATAATGAACGGTAGAGGTTACCATCTACCAGTTGACATTTGGAGTTTGGGATGTACTATTATTGAAATGGCAACGGCAAAACCTCCTTGGCATAAATACGAGGGGGTATGCTTTCACTTTGTAGCTATAGTTTTCCAAGTAACTTGTGAATGCCAAGCTGATCCAATCTGATCTTGCAGGTAGCTGCTATATTTAAGATCGCAAACAGTAAAGAGATACCTGAAATCCCAGACAGCTTTTCTGAGGAAGGAAAAAGCTTCTTGCAGATGTGCTTAAAACGTGATCCTGCATCTCGCTTCACTGCAACTCAGTTGATGGATCACCCTTTTGTTCAGGACCATCCAGCAGTAAGAGCTGCGAAATCTGGTGCACTGAGAAATGCGTTTGCACCAGCAGATGGGACGCATACAACGGTATACTTTTATATTTATCATTCTGAATTCAGCTTTCCGTAGGCCTTTATTCTCATGGGCCCTTTCCAAAGTCCAATGAGAAAAGCAGCCACAGCACACTGGGTTGAGTACTTTACATGCGCATAAACCACTTTGGCCAATAAATGGTACCACCTCCACCCCAGAATATAACAATTTCTAGCTATGAATCTGGACAAGTGTTTTTCCAGATTCATAGCTAAAACTTGCTACCTCCTCCGTTTCACAATGTAAGACTTTTTAGCATTGCTCATATTCATATAGATGTTAATAAATGTAGACATATTCGTATGTCTAGATTCATTAATATTTATATGAATATGAGTAATGCTAGAAAATCTTACATTATGAAACGGAGGGAGTATATTTTAGGGGCGGAGGGAGTAGCCTTCTTTTCGTTTTCTGGCCAGTGCTTTTACATTCTTCCTCAGTTGCACTGGCTTAGTCAAAGATCCTTTTGAGTATGTCTAGTTAAAATTGTAAGCTGATGGAGCAAGGGCCCCTTTTGCTACTTTATTTGAATGGAGTTCGATGTAGTATTGTTGGCTTTTAAGGGGGAAAATGGCATTGCTTGCTTCTTTTATGGTTTCTATTTTCCTGAATCCTGAGTCCTGACGCTTATCATGTCTTCATCCTTGTTGCAGTCCAACAGGGAGTTCTCAAGGAAAAGTATCACTCCCCTAAAGGATATAGGAGTGAGTGCAAGAGATTTTACCGGATTTTCCACAGCCGTTCCTTCACCACACACCGCCAGGTACTGTGATTCTTGCATTTATCCTCACTTTGTACTCTCTTTCAACTTGTTGATGCTTATGTATTATCCTACAGCAGTCCTATTTCCGTTGTGAGAACAAACATGTCTCTACCGGTGTCCCCATGCTCAAGCCCATTGCGGCAGTTTAAGCAATCCAACTGGAGCTGCCTGCCATCCCCACCACACCCAACATTTTCCAATGGTGCTACTTCCTATAATCTATCAAGCTACATGATGAACGAGACAAGACGAATTCCCACGATTTCGGATACCTGGCAGGATATCAGCCAGTTGAAGGTCCAAAGCCCCTACGGCTCCCCAAAGAGGTTCTGAGCGTCAGTCATCCATGAGTGCTGATGAATGTTCAGCAGGAGAATTGTTCCCATGACATCGTAGATATATAATGTTAGAGATGTCAGCAACATGTCGTAACTCTGTTACTACACCGATCTGATTTTACTGTACAGTATAGAAAGGCTCCACGAGGAAAGAGGCTGTTGACAAGAGAGGAATTTCTGTATATCTGTAGGCGGTTGTCGCCTCCACTTTGTATTATGCTGTACTATATCAGTACATAAAAATACGGCCTGTAAATTCGCTAGCTTGGAGAAGCTGACGTTTGGATGATGTAGTTAGTTTAGCGCTTCCCTAGCAGATGTAAGGATTTCTCCCTACTGGGCACTGGCTACTGCAATGAATATAGCTAAAGTTTACATTTAT
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| CDS seq | ATGCCCGCGTGGTGGCCACGGAAGTCGAGGTCGAAGGCGAAGGGCGTGGGGAAGCCCCCCGGGGCAGGGGCGGCCTCCGCGGCGTCGTCCCCGCGCAAGTCGCTCGACCTCGTTGACCTCTCCGCCTCCCCCTCGGTGACCCCCCGGGCGAGGGAGAAGGCGCGCAGCCTCGACTCGCCGTCGGCCGCCGCGCCGCGGCATGGGGGCGGGCGGTGTGGTGGGGGGTTCGGGGAGGTCGGGTACAAGCTCCCCGTGCCCGTGGGTGACGCGGGGCCGGGGGGGCAGGGGCAGGGGCAGGAGCCGGAGTTGGAGCCGGCTCCTGTAAGGTTCGAGGAGAACGGGGATGTGGTGGGCGGCGTCGCCGGCGACGCCTCGTCGGAGGAGTTGAGCGTGTGCTCGCATGATTCGTCGGACGAGGCGACGGATCAGCAAGTATGTAGGTCTACGGATCCGGCGTCTTTTGTCAGGGGAAGAAATATGCCATCTGACTCACATAAGATCCTAAATGAAGACAATCATTTCATGTCCTATAGCATGCCACGGGAGCATCGGAAGTTCTTCGAGGTTCCTGTCACTAATATGGGAGAACTTCATTTGCATTGTGATGATCTGTCAACTAGCGAAACTAGTTCACGTGGCAGAATGTTGCCCGAGGATTTTCTTGCTCCAAGAACAAGAAGCCTCTCCCCTGGACCGAAAGGCCATACTTTTGCTGTAAATAATGTAAATTCAAGGGAATTTGGTTTTAGTCCAAGGTCACCAGTAAAAATGATGGATGGATTGAAGAGCCCACCTCATCCTTTACCTCTTCCTCCAGGTCCTGCTACTTGTTCACCTCTTCCCCCATCTCCCACTGCTTACTCGCCTCACCCTCTAGGTCCCACTACTTGCTTGCAATCCGAATCACAATGGAAAAAAGGCAAATTGTTAGGGAGCGGTACATTTGGCCAGGTTTACCTTGGATTTAACAGTGAAAATGGGCAGTTCTGTGCGATTAAGGAGGTCCAAGTTATTTCGGATGATCCACATTCAAAAGAACGACTCAAGCAATTGAATCAGGAAATAGATATGCTTAGGCAACTTTCGCACCCAAACATTGTGCAGTACTATGGAAGTGAGATGACTGATGATGCACTTTCAATTTATCTGGAGTTTGTTTCTGGGGGCTCAATTCATAAATTACTTAGAGAGTATGGTCCTTTTAAGGAACCTGTGATCCGTAATTACACTGGACAAATTCTCTCTGGTCTTGCCTACTTGCATGGGAGGAACACTGTCCACAGAGATATTAAAGGTGCTAACATACTTGTCGGCCCTAATGGTGAAGTCAAACTTGCTGACTTTGGCATGGCTAAGCATATATCATCTTTTGCTGAAATACGCTCTTTCAAAGGAAGTCCTTACTGGATGGCTCCTGAGGTTATAATGAACGGTAGAGGTTACCATCTACCAGTTGACATTTGGAGTTTGGGATGTACTATTATTGAAATGGCAACGGCAAAACCTCCTTGGCATAAATACGAGGGGGTAGCTGCTATATTTAAGATCGCAAACAGTAAAGAGATACCTGAAATCCCAGACAGCTTTTCTGAGGAAGGAAAAAGCTTCTTGCAGATGTGCTTAAAACGTGATCCTGCATCTCGCTTCACTGCAACTCAGTTGATGGATCACCCTTTTGTTCAGGACCATCCAGCAGTAAGAGCTGCGAAATCTGGTGCACTGAGAAATGCGTTTGCACCAGCAGATGGGACGCATACAACGTCCAACAGGGAGTTCTCAAGGAAAAGTATCACTCCCCTAAAGGATATAGGAGTGAGTGCAAGAGATTTTACCGGATTTTCCACAGCCGTTCCTTCACCACACACCGCCAGTCCTATTTCCGTTGTGAGAACAAACATGTCTCTACCGGTGTCCCCATGCTCAAGCCCATTGCGGCAGTTTAAGCAATCCAACTGGAGCTGCCTGCCATCCCCACCACACCCAACATTTTCCAATGGTGCTACTTCCTATAATCTATCAAGCTACATGATGAACGAGACAAGACGAATTCCCACGATTTCGGATACCTGGCAGGATATCAGCCAGTTGAAGGTCCAAAGCCCCTACGGCTCCCCAAAGAGGTTCTGA
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| Protein seq | MPAWWPRKSRSKAKGVGKPPGAGAASAASSPRKSLDLVDLSASPSVTPRAREKARSLDSPSAAAPRHGGGRCGGGFGEVGYKLPVPVGDAGPGGQGQGQEPELEPAPVRFEENGDVVGGVAGDASSEELSVCSHDSSDEATDQQVCRSTDPASFVRGRNMPSDSHKILNEDNHFMSYSMPREHRKFFEVPVTNMGELHLHCDDLSTSETSSRGRMLPEDFLAPRTRSLSPGPKGHTFAVNNVNSREFGFSPRSPVKMMDGLKSPPHPLPLPPGPATCSPLPPSPTAYSPHPLGPTTCLQSESQWKKGKLLGSGTFGQVYLGFNSENGQFCAIKEVQVISDDPHSKERLKQLNQEIDMLRQLSHPNIVQYYGSEMTDDALSIYLEFVSGGSIHKLLREYGPFKEPVIRNYTGQILSGLAYLHGRNTVHRDIKGANILVGPNGEVKLADFGMAKHISSFAEIRSFKGSPYWMAPEVIMNGRGYHLPVDIWSLGCTIIEMATAKPPWHKYEGVAAIFKIANSKEIPEIPDSFSEEGKSFLQMCLKRDPASRFTATQLMDHPFVQDHPAVRAAKSGALRNAFAPADGTHTTSNREFSRKSITPLKDIGVSARDFTGFSTAVPSPHTASPISVVRTNMSLPVSPCSSPLRQFKQSNWSCLPSPPHPTFSNGATSYNLSSYMMNETRRIPTISDTWQDISQLKVQSPYGSPKRF |
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| Function | Mitogen-activated protein kinase kinase kinase 3 [UniProtKB/Swiss-Prot:F4HRJ4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0014260 | OsIR64_11g0014260.01 | Chr11 | 18802832 | 18808843 | + | NAM | ||
| CDS seq | ATGCCCGCGTGGTGGCCACGGAAGTCGAGGTCGAAGGCGAAGGGCGTGGGGAAGCCCCCCGGGGCAGGGGCGGCCTCCGCGGCGTCGTCCCCGCGCAAGTCGCTCGACCTCGTTGACCTCTCCGCCTCCCCCTCGGTGACCCCCCGGGCGAGGGAGAAGGCGCGCAGCCTCGACTCGCCGTCGGCCGCCGCGCCGCGGCATGGGGGCGGGCGGTGTGGTGGGGGGTTCGGGGAGGTCGGGTACAAGCTCCCCGTGCCCGTGGGTGACGCGGGGCCGGGGGGGCAGGGGCAGGGGCAGGAGCCGGAGTTGGAGCCGGCTCCTGTAAGGTTCGAGGAGAACGGGGATGTGGTGGGCGGCGTCGCCGGCGACGCCTCGTCGGAGGAGTTGAGCGTGTGCTCGCATGATTCGTCGGACGAGGCGACGGATCAGCAAGTATGTAGGTCTACGGATCCGGCGTCTTTTGTCAGGGGAAGAAATATGCCATCTGACTCACATAAGATCCTAAATGAAGACAATCATTTCATGTCCTATAGCATGCCACGGGAGCATCGGAAGTTCTTCGAGGTTCCTGTCACTAATATGGGAGAACTTCATTTGCATTGTGATGATCTGTCAACTAGCGAAACTAGTTCACGTGGCAGAATGTTGCCCGAGGATTTTCTTGCTCCAAGAACAAGAAGCCTCTCCCCTGGACCGAAAGGCCATACTTTTGCTGTAAATAATGTAAATTCAAGGGAATTTGGTTTTAGTCCAAGGTCACCAGTAAAAATGATGGATGGATTGAAGAGCCCACCTCATCCTTTACCTCTTCCTCCAGGTCCTGCTACTTGTTCACCTCTTCCCCCATCTCCCACTGCTTACTCGCCTCACCCTCTAGGTCCCACTACTTGCTTGCAATCCGAATCACAATGGAAAAAAGGCAAATTGTTAGGGAGCGGTACATTTGGCCAGGTTTACCTTGGATTTAACAGTGAAAATGGGCAGTTCTGTGCGATTAAGGAGGTCCAAGTTATTTCGGATGATCCACATTCAAAAGAACGACTCAAGCAATTGAATCAGGAAATAGATATGCTTAGGCAACTTTCGCACCCAAACATTGTGCAGTACTATGGAAGTGAGATGACTGATGATGCACTTTCAATTTATCTGGAGTTTGTTTCTGGGGGCTCAATTCATAAATTACTTAGAGAGTATGGTCCTTTTAAGGAACCTGTGATCCGTAATTACACTGGACAAATTCTCTCTGGTCTTGCCTACTTGCATGGGAGGAACACTGTCCACAGAGATATTAAAGGTGCTAACATACTTGTCGGCCCTAATGGTGAAGTCAAACTTGCTGACTTTGGCATGGCTAAGCATATATCATCTTTTGCTGAAATACGCTCTTTCAAAGGAAGTCCTTACTGGATGGCTCCTGAGGTTATAATGAACGGTAGAGGTTACCATCTACCAGTTGACATTTGGAGTTTGGGATGTACTATTATTGAAATGGCAACGGCAAAACCTCCTTGGCATAAATACGAGGGGGTAGCTGCTATATTTAAGATCGCAAACAGTAAAGAGATACCTGAAATCCCAGACAGCTTTTCTGAGGAAGGAAAAAGCTTCTTGCAGATGTGCTTAAAACGTGATCCTGCATCTCGCTTCACTGCAACTCAGTTGATGGATCACCCTTTTGTTCAGGACCATCCAGCAGTAAGAGCTGCGAAATCTGGTGCACTGAGAAATGCGTTTGCACCAGCAGATGGGACGCATACAACGTCCAACAGGGAGTTCTCAAGGAAAAGTATCACTCCCCTAAAGGATATAGGAGTGAGTGCAAGAGATTTTACCGGATTTTCCACAGCCGTTCCTTCACCACACACCGCCAGTCCTATTTCCGTTGTGAGAACAAACATGTCTCTACCGGTGTCCCCATGCTCAAGCCCATTGCGGCAGTTTAAGCAATCCAACTGGAGCTGCCTGCCATCCCCACCACACCCAACATTTTCCAATGGTGCTACTTCCTATAATCTATCAAGCTACATGATGAACGAGACAAGACGAATTCCCACGATTTCGGATACCTGGCAGGATATCAGCCAGTTGAAGGTCCAAAGCCCCTACGGCTCCCCAAAGAGGTTCTGA
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| Protein seq | MPAWWPRKSRSKAKGVGKPPGAGAASAASSPRKSLDLVDLSASPSVTPRAREKARSLDSPSAAAPRHGGGRCGGGFGEVGYKLPVPVGDAGPGGQGQGQEPELEPAPVRFEENGDVVGGVAGDASSEELSVCSHDSSDEATDQQVCRSTDPASFVRGRNMPSDSHKILNEDNHFMSYSMPREHRKFFEVPVTNMGELHLHCDDLSTSETSSRGRMLPEDFLAPRTRSLSPGPKGHTFAVNNVNSREFGFSPRSPVKMMDGLKSPPHPLPLPPGPATCSPLPPSPTAYSPHPLGPTTCLQSESQWKKGKLLGSGTFGQVYLGFNSENGQFCAIKEVQVISDDPHSKERLKQLNQEIDMLRQLSHPNIVQYYGSEMTDDALSIYLEFVSGGSIHKLLREYGPFKEPVIRNYTGQILSGLAYLHGRNTVHRDIKGANILVGPNGEVKLADFGMAKHISSFAEIRSFKGSPYWMAPEVIMNGRGYHLPVDIWSLGCTIIEMATAKPPWHKYEGVAAIFKIANSKEIPEIPDSFSEEGKSFLQMCLKRDPASRFTATQLMDHPFVQDHPAVRAAKSGALRNAFAPADGTHTTSNREFSRKSITPLKDIGVSARDFTGFSTAVPSPHTASPISVVRTNMSLPVSPCSSPLRQFKQSNWSCLPSPPHPTFSNGATSYNLSSYMMNETRRIPTISDTWQDISQLKVQSPYGSPKRF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_11g0014260 | OsIR64_11g0014260.02 | Chr11 | 18802832 | 18807413 | + | NAM | ||
| CDS seq | ATGCCCGCGTGGTGGCCACGGAAGTCGAGGTCGAAGGCGAAGGGCGTGGGGAAGCCCCCCGGGGCAGGGGCGGCCTCCGCGGCGTCGTCCCCGCGCAAGTCGCTCGACCTCGTTGACCTCTCCGCCTCCCCCTCGGTGACCCCCCGGGCGAGGGAGAAGGCGCGCAGCCTCGACTCGCCGTCGGCCGCCGCGCCGCGGCATGGGGGCGGGCGGTGTGGTGGGGGGTTCGGGGAGGTCGGGTACAAGCTCCCCGTGCCCGTGGGTGACGCGGGGCCGGGGGGGCAGGGGCAGGGGCAGGAGCCGGAGTTGGAGCCGGCTCCTGTAAGGTTCGAGGAGAACGGGGATGTGGTGGGCGGCGTCGCCGGCGACGCCTCGTCGGAGGAGTTGAGCGTGTGCTCGCATGATTCGTCGGACGAGGCGACGGATCAGCAAGTATGTAGGTCTACGGATCCGGCGTCTTTTGTCAGGGGAAGAAATATGCCATCTGACTCACATAAGATCCTAAATGAAGACAATCATTTCATGTCCTATAGCATGCCACGGGAGCATCGGAAGTTCTTCGAGGTTCCTGTCACTAATATGGGAGAACTTCATTTGCATTGTGATGATCTGTCAACTAGCGAAACTAGTTCACGTGGCAGAATGTTGCCCGAGGATTTTCTTGCTCCAAGAACAAGAAGCCTCTCCCCTGGACCGAAAGGCCATACTTTTGCTGTAAATAATGTAAATTCAAGGGAATTTGGTTTTAGTCCAAGGTCACCAGTAAAAATGATGGATGGATTGAAGAGCCCACCTCATCCTTTACCTCTTCCTCCAGGTCCTGCTACTTGTTCACCTCTTCCCCCATCTCCCACTGCTTACTCGCCTCACCCTCTAGGTCCCACTACTTGCTTGCAATCCGAATCACAATGGAAAAAAGGCAAATTGTTAGGGAGCGGTACATTTGGCCAGGTTTACCTTGGATTTAACAGTGAAAATGGGCAGTTCTGTGCGATTAAGGAGGTCCAAGTTATTTCGGATGATCCACATTCAAAAGAACGACTCAAGCAATTGAATCAGGAAATAGATATGCTTAGGCAACTTTCGCACCCAAACATTGTGCAGTACTATGGAAGTGAGATGACTGATGATGCACTTTCAATTTATCTGGAGTTTGTTTCTGGGGGCTCAATTCATAAATTACTTAGAGAGTATGGTCCTTTTAAGGAACCTGTGATCCGTAATTACACTGGACAAATTCTCTCTGGTCTTGCCTACTTGCATGGGAGGAACACTGTCCACAGAGATATTAAAGGTGCTAACATACTTGTCGGCCCTAATGGTGAAGTCAAACTTGCTGACTTTGGCATGGCTAAGCATATATCATCTTTTGCTGAAATACGCTCTTTCAAAGGAAGTCCTTACTGGATGGCTCCTGAGGTTATAATGAACGGTAGAGGTTACCATCTACCAGTTGACATTTGGAGTTTGGGATGTACTATTATTGAAATGGCAACGGCAAAACCTCCTTGGCATAAATACGAGGGGGTAGCTGCTATATTTAAGATCGCAAACAGTAAAGAGATACCTGAAATCCCAGACAGCTTTTCTGAGGAAGGAAAAAGCTTCTTGCAGATGTGCTTAAAACGTGATCCTGCATCTCGCTTCACTGCAACTCAGTTGATGGATCACCCTTTTGTTCAGGACCATCCAGCAGTAAGAGCTGCGAAATCTGGTGCACTGAGAAATGCGTTTGCACCAGCAGATGGGACGCATACAACGGTATACTTTTATATTTATCATTCTGAATTCAGCTTTCCGTAG
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| Protein seq | MPAWWPRKSRSKAKGVGKPPGAGAASAASSPRKSLDLVDLSASPSVTPRAREKARSLDSPSAAAPRHGGGRCGGGFGEVGYKLPVPVGDAGPGGQGQGQEPELEPAPVRFEENGDVVGGVAGDASSEELSVCSHDSSDEATDQQVCRSTDPASFVRGRNMPSDSHKILNEDNHFMSYSMPREHRKFFEVPVTNMGELHLHCDDLSTSETSSRGRMLPEDFLAPRTRSLSPGPKGHTFAVNNVNSREFGFSPRSPVKMMDGLKSPPHPLPLPPGPATCSPLPPSPTAYSPHPLGPTTCLQSESQWKKGKLLGSGTFGQVYLGFNSENGQFCAIKEVQVISDDPHSKERLKQLNQEIDMLRQLSHPNIVQYYGSEMTDDALSIYLEFVSGGSIHKLLREYGPFKEPVIRNYTGQILSGLAYLHGRNTVHRDIKGANILVGPNGEVKLADFGMAKHISSFAEIRSFKGSPYWMAPEVIMNGRGYHLPVDIWSLGCTIIEMATAKPPWHKYEGVAAIFKIANSKEIPEIPDSFSEEGKSFLQMCLKRDPASRFTATQLMDHPFVQDHPAVRAAKSGALRNAFAPADGTHTTVYFYIYHSEFSFP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.640339 | 0.629457 | 0.982791 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0437600 | SBH | 10.868845 | 24.273117 | 10.915946 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g35700 | SBH | 7.308696 | 7.910039 | 1.737378 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0437600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0014080 | SBH | 2.433296 | 10.474335 | 8.342319 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0014930 | SBH | 1.508680 | 2.547067 | 7.020557 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0014670 | SBH | 4.619674 | 16.656530 | 19.877020 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0014260 | SBH | 1.310580 | 0.326122 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0014580 | SBH | 27.464987 | 15.341488 | 28.641148 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0013500 | RBH | 0.645073 | 0.646650 | 0.974025 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0336900 | SBH | 14.272501 | 42.3294105 | 9.9545955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0014040 | SBH | 1.675465 | 0.471973 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0013820 | SBH | 3.013586 | 12.983262 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0013790 | SBH | 20.447229 | 24.449310 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0014410 | SBH | 3.313497 | 1.765126 | 2.273582 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0014610 | SBH | 2.278887 | 12.408436 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G013670 | SBH | 3.557104 | 1.753949 | 4.670844 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0013690 | SBH | 8.113715 | 34.153446 | 9.529737 |
