Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsIR64_11g0002190 OGI:11005350 | 16/16 IR 64 | OsIR64RS1 | Gramene(+IsoSeq) Chr11:1568254-1571013
Gene Symbol -
DNA seq

ACCTACCATCACCGGCACGGCCATGAGCACTAGCTGTAGCGGTGCCCTTCGCGCAGCCACCACCAAAGCGCTGCTACTCCTCGTCGTCGCCGTCTTCGTAGTCTCGCTCTCGCGTCCATTTCCGTGCGCGGCGGCGGCGCGCGACAGTCTACTCCGGGGCGCCTCCATCGCCGTCGAGGACCACGCCACCGACGTCCTGCTCTCCCCGGACGGCACCTTCGCCTGCGGCTTCTACGTCGTCTCGCCCACCGTCTTCACCTTCTCCGTCTGGTTCGCGCGCGCCGCCGACCGCGCCGTCGTCTGGTCCGCCAACCGCGGCCGCCCCGTCCACAGCAAGCGCTCCCGTCTCAAACTCAACGGCCGCCGCCGCGCGCTCGTCCTCACCGACTACGACGGCGAGGTGGTCTGGAACTCCACCGTCAGCGCCAACGCCACCGCCACCGCCACAGCTGCGCGCGCTCGGCTGCACGATTCCGGCAACCTCGCCGTCGAGGACGCGAGCGGGAACGTCCTATGGCAGAGCTTCGACCACCCCACCGACACACTACTGCCTACGCAGCGCATCGCCGCCGGCGAGGCGATGGTCTCGGCAGACAAGCTCCTCGCCGCGGGCTTCTACAGCTTCCGCTTCAGCGACTACGCCATGCTGTCGCTGGTGTACGACAACCATGAGATGTCCAGCATCTACTGGCCCAACCCCTACTACAGCTACTGGCAGAACAGTCGCAAGATCTACAACTTCACCCGGGAAGCTTTCTTCGATGCCTCTGGCCATTTCTCGTCCAGCGACAACGCCACCTTCGACGCCTCCGATCTGGCCAAGAATGTCGCCGTTAGGAGGAGGCTGACGCTGGACACAGATGGTAACCTCAGGCTGTACAGCCTTGACGAGGTCACCGGGACATGGTCGGTGTCGTGGATGGCGTTCAGCAACCCGTGCATCATCCACGGTGTGTGCGGCGCCAACGCCGTGTGCCTCTACTCGCCGGCGCCGGTGTGCGTCTGCGCGCCAGGGTACGCGCGCGCCGAACCGAGCGACTGGAGCAGAGGCTGCCGGCCGACGTTCAACTCCAGTGACGACGGCGGCCAGCCGCGGGCGATGAAGATGGTGCCGCTGCCGCACACCGACTTCTGGGGCTTCGACATCAACAGCAGCGAGAACCTGTCGCTGGACGAGTGCTCGACACGGTGCATGAGCGAGCCGTCGTGCGTGGTTTTCCAGTACAAGCAGGGCAAAGGTGAGTGCTATCCAAAAAGCCTCATGTTCAATGGCAGAACGTTCCCCGGCCTGCCTGGGACGGCCTATCTCAAGGTCCCGGCTGATCTTGACATGCTAGAAATACACATCCACCAATGGCAAGCAGACAGCGATGGTCACGGCATTGCCGCCATTCAGGAAGACATCGTCGGATGCGGTGGCATGAGCTCACCGGAGTTCTTGCTCAATGTCTCGAATGCGTCATCGAGCAAAAGTAATCAGGGCAAGTCGATATGGTTCTACTTCTACGGATTTCTGACTGCATTTTTTGTCATTGAAGTGTTTGTGATAGCATTCGGTTGCTGGCTCTTTTCCAACAAGGGAGTTTTTAAGCCATGTCAGGTTTCAGCACTAGATGAAGGGTACAGGATGGTTACCAACCATTTTCGCACATATAGCTACGCAGAGCTACAGAAGGGAACTAGAAAGTTTCAGAGTGAGATCGGCCGTGGTGGGTCAGGTGTTGTGTACAAAGGAGTTCTAGATGATGAGAGGACGGTGGCCGTCAAGGTGCTACAAGATGTGAAGCAAAGTGAGGATGTGTTCCAGGCTGAGTTGAGTGTTATTGGTAGAATTTATCATATGAATCTTGTTAGAATGTGGGGTTTTTGCTTAGAAGGAATACATAGGATTTTAGTCTATGAATACATTGAGAATGGATCATTGGCCAAAGTACTATTTCAAGGGAGGAATTCCGGTATGTTTCTTGGATGGAAGCAAAGGTTCAACATTGCTCTAGGTGTTGCCAAGGGGCTAGCATATCTTCACAATGAGTGCCTTGAGTGGATCATCCATTGCGACATGAAGCCGGAGAACATACTATTAGATGAAGATATGGAGCCTAAGATCACTGACTTTGGCTTGTCCAAGTTGTTGAATAGAGACGGGTCTGGTCCTGACATGTCACGGATTCGAGGGACAAGAGGATATATGGCTCCTGAGTGGGTTTCTAGCCTTCCAATCACAGAGAAAGTTGATGTGTACAGTTACGGAGTGGTGCTTCTTGAACTGGTGAAAGGGATGAGGATTTTAGACTGGGTGTTGGATGGGAAAGAGGGACTAGAAGCCGACGTGAGAAGTGTGGTTAAGATGGTTGTCAGCAAACTTGAGAGCAACATGGAATCCTGGGTTGCGGATTTGATGGATGATCGGTTGCATGGTGAATTTAATCATTTGCAGGCTAGGCTACTAATGCAATTGGCCGTTTCATGCTTGGAAGAAGATAAAAACAAAAGGCCAACCATGAAGTACATAGTACAAATGCTCATTTCCACTGAAGATGAAGCTCATGCCTTCACCTAATTCTGATGGTTCTAACACAAGTATTTGAGATATAATATGAAGTTCACTCTTTATCTATTTCACCCTTTCTGTAAAAATTATTCAAATTCATTAGCACTCTACTTTATTAGTTGGAAGATTGTAAGAGAGTGCAGGTTCTTAAGGACAACTTGATAAACATCAGTATAGTACTGAAATTATGCTAGCAAATGATTAAAACT

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CDS seq

ATGAGCACTAGCTGTAGCGGTGCCCTTCGCGCAGCCACCACCAAAGCGCTGCTACTCCTCGTCGTCGCCGTCTTCGTAGTCTCGCTCTCGCGTCCATTTCCGTGCGCGGCGGCGGCGCGCGACAGTCTACTCCGGGGCGCCTCCATCGCCGTCGAGGACCACGCCACCGACGTCCTGCTCTCCCCGGACGGCACCTTCGCCTGCGGCTTCTACGTCGTCTCGCCCACCGTCTTCACCTTCTCCGTCTGGTTCGCGCGCGCCGCCGACCGCGCCGTCGTCTGGTCCGCCAACCGCGGCCGCCCCGTCCACAGCAAGCGCTCCCGTCTCAAACTCAACGGCCGCCGCCGCGCGCTCGTCCTCACCGACTACGACGGCGAGGTGGTCTGGAACTCCACCGTCAGCGCCAACGCCACCGCCACCGCCACAGCTGCGCGCGCTCGGCTGCACGATTCCGGCAACCTCGCCGTCGAGGACGCGAGCGGGAACGTCCTATGGCAGAGCTTCGACCACCCCACCGACACACTACTGCCTACGCAGCGCATCGCCGCCGGCGAGGCGATGGTCTCGGCAGACAAGCTCCTCGCCGCGGGCTTCTACAGCTTCCGCTTCAGCGACTACGCCATGCTGTCGCTGGTGTACGACAACCATGAGATGTCCAGCATCTACTGGCCCAACCCCTACTACAGCTACTGGCAGAACAGTCGCAAGATCTACAACTTCACCCGGGAAGCTTTCTTCGATGCCTCTGGCCATTTCTCGTCCAGCGACAACGCCACCTTCGACGCCTCCGATCTGGCCAAGAATGTCGCCGTTAGGAGGAGGCTGACGCTGGACACAGATGGTAACCTCAGGCTGTACAGCCTTGACGAGGTCACCGGGACATGGTCGGTGTCGTGGATGGCGTTCAGCAACCCGTGCATCATCCACGGTGTGTGCGGCGCCAACGCCGTGTGCCTCTACTCGCCGGCGCCGGTGTGCGTCTGCGCGCCAGGGTACGCGCGCGCCGAACCGAGCGACTGGAGCAGAGGCTGCCGGCCGACGTTCAACTCCAGTGACGACGGCGGCCAGCCGCGGGCGATGAAGATGGTGCCGCTGCCGCACACCGACTTCTGGGGCTTCGACATCAACAGCAGCGAGAACCTGTCGCTGGACGAGTGCTCGACACGGTGCATGAGCGAGCCGTCGTGCGTGGTTTTCCAGTACAAGCAGGGCAAAGGTGAGTGCTATCCAAAAAGCCTCATGTTCAATGGCAGAACGTTCCCCGGCCTGCCTGGGACGGCCTATCTCAAGGTCCCGGCTGATCTTGACATGCTAGAAATACACATCCACCAATGGCAAGCAGACAGCGATGGTCACGGCATTGCCGCCATTCAGGAAGACATCGTCGGATGCGGTGGCATGAGCTCACCGGAGTTCTTGCTCAATGTCTCGAATGCGTCATCGAGCAAAAGTAATCAGGGCAAGTCGATATGGTTCTACTTCTACGGATTTCTGACTGCATTTTTTGTCATTGAAGTGTTTGTGATAGCATTCGGTTGCTGGCTCTTTTCCAACAAGGGAGTTTTTAAGCCATGTCAGGTTTCAGCACTAGATGAAGGGTACAGGATGGTTACCAACCATTTTCGCACATATAGCTACGCAGAGCTACAGAAGGGAACTAGAAAGTTTCAGAGTGAGATCGGCCGTGGTGGGTCAGGTGTTGTGTACAAAGGAGTTCTAGATGATGAGAGGACGGTGGCCGTCAAGGTGCTACAAGATGTGAAGCAAAGTGAGGATGTGTTCCAGGCTGAGTTGAGTGTTATTGGTAGAATTTATCATATGAATCTTGTTAGAATGTGGGGTTTTTGCTTAGAAGGAATACATAGGATTTTAGTCTATGAATACATTGAGAATGGATCATTGGCCAAAGTACTATTTCAAGGGAGGAATTCCGGTATGTTTCTTGGATGGAAGCAAAGGTTCAACATTGCTCTAGGTGTTGCCAAGGGGCTAGCATATCTTCACAATGAGTGCCTTGAGTGGATCATCCATTGCGACATGAAGCCGGAGAACATACTATTAGATGAAGATATGGAGCCTAAGATCACTGACTTTGGCTTGTCCAAGTTGTTGAATAGAGACGGGTCTGGTCCTGACATGTCACGGATTCGAGGGACAAGAGGATATATGGCTCCTGAGTGGGTTTCTAGCCTTCCAATCACAGAGAAAGTTGATGTGTACAGTTACGGAGTGGTGCTTCTTGAACTGGTGAAAGGGATGAGGATTTTAGACTGGGTGTTGGATGGGAAAGAGGGACTAGAAGCCGACGTGAGAAGTGTGGTTAAGATGGTTGTCAGCAAACTTGAGAGCAACATGGAATCCTGGGTTGCGGATTTGATGGATGATCGGTTGCATGGTGAATTTAATCATTTGCAGGCTAGGCTACTAATGCAATTGGCCGTTTCATGCTTGGAAGAAGATAAAAACAAAAGGCCAACCATGAAGTACATAGTACAAATGCTCATTTCCACTGAAGATGAAGCTCATGCCTTCACCTAA

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Protein seq

MSTSCSGALRAATTKALLLLVVAVFVVSLSRPFPCAAAARDSLLRGASIAVEDHATDVLLSPDGTFACGFYVVSPTVFTFSVWFARAADRAVVWSANRGRPVHSKRSRLKLNGRRRALVLTDYDGEVVWNSTVSANATATATAARARLHDSGNLAVEDASGNVLWQSFDHPTDTLLPTQRIAAGEAMVSADKLLAAGFYSFRFSDYAMLSLVYDNHEMSSIYWPNPYYSYWQNSRKIYNFTREAFFDASGHFSSSDNATFDASDLAKNVAVRRRLTLDTDGNLRLYSLDEVTGTWSVSWMAFSNPCIIHGVCGANAVCLYSPAPVCVCAPGYARAEPSDWSRGCRPTFNSSDDGGQPRAMKMVPLPHTDFWGFDINSSENLSLDECSTRCMSEPSCVVFQYKQGKGECYPKSLMFNGRTFPGLPGTAYLKVPADLDMLEIHIHQWQADSDGHGIAAIQEDIVGCGGMSSPEFLLNVSNASSSKSNQGKSIWFYFYGFLTAFFVIEVFVIAFGCWLFSNKGVFKPCQVSALDEGYRMVTNHFRTYSYAELQKGTRKFQSEIGRGGSGVVYKGVLDDERTVAVKVLQDVKQSEDVFQAELSVIGRIYHMNLVRMWGFCLEGIHRILVYEYIENGSLAKVLFQGRNSGMFLGWKQRFNIALGVAKGLAYLHNECLEWIIHCDMKPENILLDEDMEPKITDFGLSKLLNRDGSGPDMSRIRGTRGYMAPEWVSSLPITEKVDVYSYGVVLLELVKGMRILDWVLDGKEGLEADVRSVVKMVVSKLESNMESWVADLMDDRLHGEFNHLQARLLMQLAVSCLEEDKNKRPTMKYIVQMLISTEDEAHAFT

Function Putative receptor protein kinase ZmPK1 [UniProtKB/Swiss-Prot:P17801]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsIR64_11g0002190 OsIR64_11g0002190.01 Chr11 1568254 1571013 + NAM
CDS seq

ATGAGCACTAGCTGTAGCGGTGCCCTTCGCGCAGCCACCACCAAAGCGCTGCTACTCCTCGTCGTCGCCGTCTTCGTAGTCTCGCTCTCGCGTCCATTTCCGTGCGCGGCGGCGGCGCGCGACAGTCTACTCCGGGGCGCCTCCATCGCCGTCGAGGACCACGCCACCGACGTCCTGCTCTCCCCGGACGGCACCTTCGCCTGCGGCTTCTACGTCGTCTCGCCCACCGTCTTCACCTTCTCCGTCTGGTTCGCGCGCGCCGCCGACCGCGCCGTCGTCTGGTCCGCCAACCGCGGCCGCCCCGTCCACAGCAAGCGCTCCCGTCTCAAACTCAACGGCCGCCGCCGCGCGCTCGTCCTCACCGACTACGACGGCGAGGTGGTCTGGAACTCCACCGTCAGCGCCAACGCCACCGCCACCGCCACAGCTGCGCGCGCTCGGCTGCACGATTCCGGCAACCTCGCCGTCGAGGACGCGAGCGGGAACGTCCTATGGCAGAGCTTCGACCACCCCACCGACACACTACTGCCTACGCAGCGCATCGCCGCCGGCGAGGCGATGGTCTCGGCAGACAAGCTCCTCGCCGCGGGCTTCTACAGCTTCCGCTTCAGCGACTACGCCATGCTGTCGCTGGTGTACGACAACCATGAGATGTCCAGCATCTACTGGCCCAACCCCTACTACAGCTACTGGCAGAACAGTCGCAAGATCTACAACTTCACCCGGGAAGCTTTCTTCGATGCCTCTGGCCATTTCTCGTCCAGCGACAACGCCACCTTCGACGCCTCCGATCTGGCCAAGAATGTCGCCGTTAGGAGGAGGCTGACGCTGGACACAGATGGTAACCTCAGGCTGTACAGCCTTGACGAGGTCACCGGGACATGGTCGGTGTCGTGGATGGCGTTCAGCAACCCGTGCATCATCCACGGTGTGTGCGGCGCCAACGCCGTGTGCCTCTACTCGCCGGCGCCGGTGTGCGTCTGCGCGCCAGGGTACGCGCGCGCCGAACCGAGCGACTGGAGCAGAGGCTGCCGGCCGACGTTCAACTCCAGTGACGACGGCGGCCAGCCGCGGGCGATGAAGATGGTGCCGCTGCCGCACACCGACTTCTGGGGCTTCGACATCAACAGCAGCGAGAACCTGTCGCTGGACGAGTGCTCGACACGGTGCATGAGCGAGCCGTCGTGCGTGGTTTTCCAGTACAAGCAGGGCAAAGGTGAGTGCTATCCAAAAAGCCTCATGTTCAATGGCAGAACGTTCCCCGGCCTGCCTGGGACGGCCTATCTCAAGGTCCCGGCTGATCTTGACATGCTAGAAATACACATCCACCAATGGCAAGCAGACAGCGATGGTCACGGCATTGCCGCCATTCAGGAAGACATCGTCGGATGCGGTGGCATGAGCTCACCGGAGTTCTTGCTCAATGTCTCGAATGCGTCATCGAGCAAAAGTAATCAGGGCAAGTCGATATGGTTCTACTTCTACGGATTTCTGACTGCATTTTTTGTCATTGAAGTGTTTGTGATAGCATTCGGTTGCTGGCTCTTTTCCAACAAGGGAGTTTTTAAGCCATGTCAGGTTTCAGCACTAGATGAAGGGTACAGGATGGTTACCAACCATTTTCGCACATATAGCTACGCAGAGCTACAGAAGGGAACTAGAAAGTTTCAGAGTGAGATCGGCCGTGGTGGGTCAGGTGTTGTGTACAAAGGAGTTCTAGATGATGAGAGGACGGTGGCCGTCAAGGTGCTACAAGATGTGAAGCAAAGTGAGGATGTGTTCCAGGCTGAGTTGAGTGTTATTGGTAGAATTTATCATATGAATCTTGTTAGAATGTGGGGTTTTTGCTTAGAAGGAATACATAGGATTTTAGTCTATGAATACATTGAGAATGGATCATTGGCCAAAGTACTATTTCAAGGGAGGAATTCCGGTATGTTTCTTGGATGGAAGCAAAGGTTCAACATTGCTCTAGGTGTTGCCAAGGGGCTAGCATATCTTCACAATGAGTGCCTTGAGTGGATCATCCATTGCGACATGAAGCCGGAGAACATACTATTAGATGAAGATATGGAGCCTAAGATCACTGACTTTGGCTTGTCCAAGTTGTTGAATAGAGACGGGTCTGGTCCTGACATGTCACGGATTCGAGGGACAAGAGGATATATGGCTCCTGAGTGGGTTTCTAGCCTTCCAATCACAGAGAAAGTTGATGTGTACAGTTACGGAGTGGTGCTTCTTGAACTGGTGAAAGGGATGAGGATTTTAGACTGGGTGTTGGATGGGAAAGAGGGACTAGAAGCCGACGTGAGAAGTGTGGTTAAGATGGTTGTCAGCAAACTTGAGAGCAACATGGAATCCTGGGTTGCGGATTTGATGGATGATCGGTTGCATGGTGAATTTAATCATTTGCAGGCTAGGCTACTAATGCAATTGGCCGTTTCATGCTTGGAAGAAGATAAAAACAAAAGGCCAACCATGAAGTACATAGTACAAATGCTCATTTCCACTGAAGATGAAGCTCATGCCTTCACCTAA

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Protein seq

MSTSCSGALRAATTKALLLLVVAVFVVSLSRPFPCAAAARDSLLRGASIAVEDHATDVLLSPDGTFACGFYVVSPTVFTFSVWFARAADRAVVWSANRGRPVHSKRSRLKLNGRRRALVLTDYDGEVVWNSTVSANATATATAARARLHDSGNLAVEDASGNVLWQSFDHPTDTLLPTQRIAAGEAMVSADKLLAAGFYSFRFSDYAMLSLVYDNHEMSSIYWPNPYYSYWQNSRKIYNFTREAFFDASGHFSSSDNATFDASDLAKNVAVRRRLTLDTDGNLRLYSLDEVTGTWSVSWMAFSNPCIIHGVCGANAVCLYSPAPVCVCAPGYARAEPSDWSRGCRPTFNSSDDGGQPRAMKMVPLPHTDFWGFDINSSENLSLDECSTRCMSEPSCVVFQYKQGKGECYPKSLMFNGRTFPGLPGTAYLKVPADLDMLEIHIHQWQADSDGHGIAAIQEDIVGCGGMSSPEFLLNVSNASSSKSNQGKSIWFYFYGFLTAFFVIEVFVIAFGCWLFSNKGVFKPCQVSALDEGYRMVTNHFRTYSYAELQKGTRKFQSEIGRGGSGVVYKGVLDDERTVAVKVLQDVKQSEDVFQAELSVIGRIYHMNLVRMWGFCLEGIHRILVYEYIENGSLAKVLFQGRNSGMFLGWKQRFNIALGVAKGLAYLHNECLEWIIHCDMKPENILLDEDMEPKITDFGLSKLLNRDGSGPDMSRIRGTRGYMAPEWVSSLPITEKVDVYSYGVVLLELVKGMRILDWVLDGKEGLEADVRSVVKMVVSKLESNMESWVADLMDDRLHGEFNHLQARLLMQLAVSCLEEDKNKRPTMKYIVQMLISTEDEAHAFT

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.058115 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0133300 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g03860 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os11g0133300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0002200 RBH 0.0 6.652266 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0002230 RBH 0.0 0.777989 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0002220 RBH 0.0 1.615555 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0002180 SBH 0.0 0.040205 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0002160 RBH 0.0 1.251118 0.409694
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0031200 RBH 0.0144205 2.8781085 0.23161
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0002250 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0030000 RBH 0.011841 2.1662245 0.1430115
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0002090 RBH 0.0 0.044025 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0002240 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0002230 RBH 0.0 4.575551 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0002170 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0002240 RBH 0.0 0.502415 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G002170 RBH 0.0 1.601680 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0002150 RBH 0.0 5.397079 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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