Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_08g0023220 | OGI:08076310 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr08:28352679-28354911 | ||||||||
| Gene Symbol | OsbHLH080 | ||||||||||
| DNA seq | AGGAACAGTAGCAATAGCTCTCTTTTTATATTAACAAAATAATTTCATGAAGTAGAGTACAATGGTGGTGGCAGTGCAGCCGTTGAGGAAATCTTCATGGGCAGAACCTAACCAAATAAGGAGCTACAAAATATTACAAAGTCTCTGAAAAATGTGTAGAAAACTCTACTTGCTTGCTGTTCTTCCCTCCAAAATCCTCTTATAATGTTGTAGACTGCCTCCAGACAAGGGGATGGACTAGATCCAACATCTCAAACTTATCTGGTGCATTGCATGCTCCTACCAATCTTGCAGCATTATTATTTCCTCCTGTTCAAAATTTCAGAAGACTTTTATATATTAGAAGAAGCAGTTAAGAGAAAATTTACAGTAGTAAATCCAATATTCAGGGTCTCACAAAGTCACAATTAATGAACTTTGGTTGCAGTACCTATTGTCAATGTGGGGTCCTTTTTTCTTGCTTTCTCTGTCACTCTTCCCCTACTGGAAAGAGCACATGTTGTTGAACACCAATTGATTGAGCATCTCCTGCTGCCTTGGCTCCCCCACTGCTTGCATCAGGTAACTGCCATTGTCCTGAAAGGGGATGCACACATTCAGTGATGACCTCAGGTGGGTAAAATTGTTGGATTTTTTTTACTTTGATGCCATGATATATGTAGCTAAATTGGGACATTTTCATGTATGATTTAGCCAAAGAAAGGTGGACATGTGCCAACCTGAGAGAAAGAGATGGCTCCATGCTGGCTTTGCAGTGAGTAGGATGTGGTTGAGGTTGTGTCCATGATAGCTTGAGATGGAGCTGGGCTTGATTGGTTCAGTACTGGATTAGGCATTGCAAGGGCTTCTTGGAACATGCCTCCAATCTTCTGAAAAAGATTAAGAACATTAATCTAACTTTACACAAGAAATTAATTTTAGGCATATTTAGTTCAAGGTACAAATATTTATTTAGATATTTACTTGGTCATGGAGGCCATCGCTGTCCATTCCAAAGCCATACAACACTGGGCTCATTGAAGCAATCCTCATGGATAGGAACTGCACCATATAGACAAAACAAAGAAAATGTCATCCTGTCCAAAGTTTTCAAAAATGAAGTATTACTTCTTTTTTTCTTTTTTTTTAGTGTACCTCAACTTGGTTCTGCAACGACTGTACATAGTTGATGATCTCATCCAAAATGAGAGCCTTTCCAGTAACCTGAAGAAAAGCACAGTTGTTTCTTATCAAAGTTAGAGCCATGCATTAGCAAGATGTCACTACAACTGTACAACTCAACAATAATTACTCTCAAAAATAAAAATGAGAGGAAAGAATTGAACTAGAGCATGTAATAGTTAAATAGTAACCAACTTATTTTTTACCTTGTCACAACCAGGGACCAGTGCTTGCAGCATCCTCATCCTCTCACTGATCCTCTCCCTCCTCACCTGTAGAGAGAAAATGTCACCAAGAATCAGAGACCAGGAGAAAAGATGCAGAAGCTGCAAGCCAAAAACCACTCATGCAAAAGCAGCAGAAAAATCAAAACCAAAACCAAAGTGAAGTGCAGTAGTAGTACCCTCTCTGCAAGGCTGTGGCTATCAGTTGCCTGTCCTCTCCTTGCCCTCACATGGATGTACCCTTTTGGAGGCTCATCTTCAGTGGTGCTCTTCTCCTCCACTTCTTTGCTGGCCTTCTTCCCTCTCCTGCTCTTGCCATCCTTGCAGCTATCCTGCTTGCAAAAACCCAGAATTCAGAAACCAGAATGCAACTAACAATGTTCTCTTTCAGAGATGCAAACAAGAATGCCAATGTCAATAATGTCAATGCTTTGGTTGTGTCAGTTGTTAGCTACCTTGGAGTGTGCACTGTCTTCTGCTGCCTTCCTCTTCCTGTCCACAGATGGAGAGGTGTCAAGAACTGCAGACACTGAGCTCTCCAATGAGGCATCCTCCACAATGGCTGCTGCTGCTGCATTGGCAGGTTGTGGAGCTTGGGAGCCATGGCTGTGGTTGTAGAGGAAGAAGCTTGAGATGTTGGGGTCATTGGTGGTGGCGATGGCTGCTCCAGCAGCAGTAGCCTTGAGGAGGAGAGAGTGGTGTGGTGAGAAGTCTGCCATTGCTTTGCTGCTGCTGAACTCTCTGTGTCTGAAACTTTTTGGTGTTGTTGATTGGAAGTTTGGTTTCTTCAGAGAAAAGAGGAGTACTACTTCTTCTTGGCAGAGGCTAAAGAGTAGAGCAAGTTTGGC
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| CDS seq | ATGGCAGACTTCTCACCACACCACTCTCTCCTCCTCAAGGCTACTGCTGCTGGAGCAGCCATCGCCACCACCAATGACCCCAACATCTCAAGCTTCTTCCTCTACAACCACAGCCATGGCTCCCAAGCTCCACAACCTGCCAATGCAGCAGCAGCAGCCATTGTGGAGGATGCCTCATTGGAGAGCTCAGTGTCTGCAGTTCTTGACACCTCTCCATCTGTGGACAGGAAGAGGAAGGCAGCAGAAGACAGTGCACACTCCAAGGATAGCTGCAAGGATGGCAAGAGCAGGAGAGGGAAGAAGGCCAGCAAAGAAGTGGAGGAGAAGAGCACCACTGAAGATGAGCCTCCAAAAGGGTACATCCATGTGAGGGCAAGGAGAGGACAGGCAACTGATAGCCACAGCCTTGCAGAGAGGGTGAGGAGGGAGAGGATCAGTGAGAGGATGAGGATGCTGCAAGCACTGGTCCCTGGTTGTGACAAGGTTACTGGAAAGGCTCTCATTTTGGATGAGATCATCAACTATGTACAGTCGTTGCAGAACCAAGTTGAGTTCCTATCCATGAGGATTGCTTCAATGAGCCCAGTGTTGTATGGCTTTGGAATGGACAGCGATGGCCTCCATGACCAAAAGATTGGAGGCATGTTCCAAGAAGCCCTTGCAATGCCTAATCCAGTACTGAACCAATCAAGCCCAGCTCCATCTCAAGCTATCATGGACACAACCTCAACCACATCCTACTCACTGCAAAGCCAGCATGGAGCCATCTCTTTCTCTCAGGACAATGGCAGTTACCTGATGCAAGCAGTGGGGGAGCCAAGGCAGCAGGAGATGCTCAATCAATTGGTGTTCAACAACATGTGCTCTTTCCAGTAG
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| Protein seq | MADFSPHHSLLLKATAAGAAIATTNDPNISSFFLYNHSHGSQAPQPANAAAAAIVEDASLESSVSAVLDTSPSVDRKRKAAEDSAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLHDQKIGGMFQEALAMPNPVLNQSSPAPSQAIMDTTSTTSYSLQSQHGAISFSQDNGSYLMQAVGEPRQQEMLNQLVFNNMCSFQ |
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| Function | Transcription factor bHLH137 [UniProtKB/Swiss-Prot:Q93W88] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_08g0023220 | OsIR64_08g0023220.01 | Chr08 | 28352679 | 28354911 | - | NAM | ||
| CDS seq | ATGGCAGACTTCTCACCACACCACTCTCTCCTCCTCAAGGCTACTGCTGCTGGAGCAGCCATCGCCACCACCAATGACCCCAACATCTCAAGCTTCTTCCTCTACAACCACAGCCATGGCTCCCAAGCTCCACAACCTGCCAATGCAGCAGCAGCAGCCATTGTGGAGGATGCCTCATTGGAGAGCTCAGTGTCTGCAGTTCTTGACACCTCTCCATCTGTGGACAGGAAGAGGAAGGCAGCAGAAGACAGTGCACACTCCAAGGATAGCTGCAAGGATGGCAAGAGCAGGAGAGGGAAGAAGGCCAGCAAAGAAGTGGAGGAGAAGAGCACCACTGAAGATGAGCCTCCAAAAGGGTACATCCATGTGAGGGCAAGGAGAGGACAGGCAACTGATAGCCACAGCCTTGCAGAGAGGGTGAGGAGGGAGAGGATCAGTGAGAGGATGAGGATGCTGCAAGCACTGGTCCCTGGTTGTGACAAGGTTACTGGAAAGGCTCTCATTTTGGATGAGATCATCAACTATGTACAGTCGTTGCAGAACCAAGTTGAGTTCCTATCCATGAGGATTGCTTCAATGAGCCCAGTGTTGTATGGCTTTGGAATGGACAGCGATGGCCTCCATGACCAAAAGATTGGAGGCATGTTCCAAGAAGCCCTTGCAATGCCTAATCCAGTACTGAACCAATCAAGCCCAGCTCCATCTCAAGCTATCATGGACACAACCTCAACCACATCCTACTCACTGCAAAGCCAGCATGGAGCCATCTCTTTCTCTCAGGACAATGGCAGTTACCTGATGCAAGCAGTGGGGGAGCCAAGGCAGCAGGAGATGCTCAATCAATTGGTGTTCAACAACATGTGCTCTTTCCAGTAG
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| Protein seq | MADFSPHHSLLLKATAAGAAIATTNDPNISSFFLYNHSHGSQAPQPANAAAAAIVEDASLESSVSAVLDTSPSVDRKRKAAEDSAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLHDQKIGGMFQEALAMPNPVLNQSSPAPSQAIMDTTSTTSYSLQSQHGAISFSQDNGSYLMQAVGEPRQQEMLNQLVFNNMCSFQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0536800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g42470 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0536800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0023610 | RBH | 0.0 | 0.000000 | 0.921774 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0023460 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0023400 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0023750 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0023330 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0425800 | RBH | 8.0191195 | 0.3027285 | 38.1408815 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0016140 | RBH | 0.0 | 0.0 | 0.264787 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0445800 | RBH | 6.4304365 | 0.411206 | 72.4759525 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0022600 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0022910 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0022730 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0023560 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0022890 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G023090 | RBH | 0.0 | 0.0 | 1.634263 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0023220 | RBH | 0.0 | 0.0 | 0.0 |
