Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_08g0018800 | OGI:08066800 | 10/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr08:24652280-24657981 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCAAGTCCAGTGTTGGTGCTGGCTCTCGTTGCGGCGACGCTATTGCCGGCCTCACATTGCAGCGTCAGCGGCGTCGGTTTCCAGCTCAAACTCCGACACGTCGACGCACACGGCAGCTACACCAAGCTGGAGCTTGTCACCCGCGCCATCCGCCGGAGCAGAGCCCGCGTGGCGGCGCTGCAGGCCGTCGCCGCCGCGGCGGCGACGGTGGCGCCCGTGGTGGACCCGATCACCGCGGCGAGGATACTGGTGGCGGCGAGCCAGGGGGAGTACCTGATGGACCTCGCCATCGGCACGCCGCCGCTGCGCTACACGGCCATGGTGGACACCGGCAGCGACCTCATCTGGACGCAGTGCGCGCCGTGCGTGCTCTGCGCCGACCAGCCCACGCCCTACTTCCGGCCGGCGAGGTCCGCCACGTACCGGCTCGTGCCGTGCCGGTCGCCGCTGTGCGCCGCGCTGCCGTACCCGGCATGCTTCCAGAGATCAGTGTGCGTGTACCAGTACTACTACGGCGACGAGGCGTCCACCGCCGGCGTCCTCGCCAGCGAGACCTTCACGTTCGGCGCGGCCAACTCGAGCAAGGTCATGGTGTCCGACGTCGCGTTCGGCTGCGGCAACATCAACTCGGGCCAGCTCGCCAACAGCTCCGGCATGGTCGGCCTCGGCCGCGGGCCGCTGTCGCTGGTGAGCCAGCTCGGCCCGTCGAGGTTCTCCTACTGCCTCACGTCGTTCCTCTCGCCGGAGCCGAGCCGGCTCAACTTCGGCGTGTTCGCGACGCTCAACGGCACCAACGCAAGCTCCTCCGGCTCGCCGGTGCAGTCCACGCCGCTGGTCGTCAACGCGGCGCTGCCGTCCCTCTACTTCATGTCCCTCAAGGGCATCAGCCTCGGCCAGAAGCGGCTGCCCATCGACCCGCTGGTGTTCGCCATCAACGACGACGGCACGGGCGGCGTCTTCATCGACTCCGGCACGTCGCTCACCTGGCTCCAGCAGGACGCGTACGACGCCGTGCGCCACGAGCTGGTGTCCGTCCTCCGGCCGCTGCCGCCGACGAACGACACCGAGATCGGCCTGGAGACGTGCTTCCCGTGGCCGCCGCCGCCGAGCGTGGCCGTGACGGTCCCGGACATGGAGCTCCACTTCGACGGCGGCGCCAACATGACCGTGCCGCCGGAGAACTACATGCTGATCGACGGCGCCACCGGGTTCCTGTGCCTGGCGATGATCCGCTCCGGCGACGCCACCATCATCGGCAACTACCAGCAGCAGAACATGCACATTTTGTACGACATCGCGAATAGCCTCTTGTCGTTCGTGCCGGCGCCGTGCAACATCGTGTAGGATCGATTGAATTTTTTTTTTCCGTTTCATTTTGGGACTCAATAAGTTCAGAGCTGGTCGGTGTTGCAGCCGCAGGTCGATAGATAGAGTAGTCACGCGACTGGCCTACTGCACTATCGCAGTACCATGTCTCCATGTATGATTTGTGCAGTATTTTATTACCCCAAATCCACGTACGTCGTGTACGCGTATACACGGAGAATTGAACGTCTAAGTCCACCGATCGACTTAATACTACGTGAATGTGTTCTAGTATAATTTGATAATTTTGTATTCTGGTGTAACAATTTGATTATATATGTGTTGTTTTGATTAAACAATGGTAGATGAGTACTTTCATGATGTCGGTATGACATCATATACCATTGGTATATGCATAATGTCGGTAGCAATCATGCATATACTACCTTATAATTTTAGATTTAATTTATAAGAATTAAGGTTATCATCTAATTTGCATCACCGATTTGGATGTTTTTTTCTTCACCTTCTAAAAATTCAACCGAAATACAAAACTTCCTATATAGTAAAATTTAATTAACTTCTAGTTACTAAAATGAAAAAAAATTAAGTATATATATACAAATCTGCACGAATGTATAGATTAAATAAGTACTTAAATGCGTTCGAACCAGTAGGTTCTGAACTCAGTTCTCATGCACAGAAAATGAGGTAACATATTAATTGATTAACTAAGTATCAGTTTCAAAAACTTAAAAAATGGATTAATGTGTTTCTAGCAACTTTCCTATAGAAAGTTCTCTTTTTTAAAAAAAACATACCGTTTAGCAGTTCGAAAAACGTACGTGTGAAAACAAGGGAGTGAAGTTGAAAAGAAGGGTTGCCGAATACAGTCTAAATGCGTATAGAAAAAAGTACTTGAAATAAGTAAAAAAGTACTTGAAATAAGTAAGTCATTGCATCACTTCTTTAAGTATTTGTACTAAAATCGTAGCTCAACTGGTTAATGGGAATCTTCTCACCTGATTTCAAGTCCTAAATTTGTTCGTATTTATGACTAATTATTCTTTTAGTGGTTGATGACGTACCCCTTGATGGTGAGGTGTACGTGGTGACTTTGTCAATCCAAGGATATGCAGCCCAACCTTTTCGAGGTGCTCGTATGGTAGGATATGCGTGTGCATGTTCATATGAGTGAGTCTACACGTGTTCTAAGCGTCTATATTTGTATTGTGTTTTAAAACAATCCAACCCACATTATAGATGGCCAAATGGGCCACCCGGCCTGGCCCGGGCACGACCAGACCTAGGACCAAGATCAGTTGGGTCGGCATGACCCGACCTATACACCAGGCTGGGCAATGCTCGCCTGGGCTACACCAACAGCCCAGGCACGACCCAATAAGGCTCGAGCCATGTCAGGTCGACCCGAAGGTATGAAAGCCTACTATGCTTCTCCTTGAAATAAGTCTGTTTTTGCCTCCCTCATGTCATTGGGTTGTGCTTGATATGGCTGAAATAAGTCTATTTTACCCCCTCATGCATTTTGCCTCCTGATCGTTGGACTAAGTTGTGCCGGGCTGGCCCATTGTGCCAAGGCAAAGACCCAGTCATGGCCCAACGGTCGGACTAGGCCAGCATGAGCCCGACATCGGTCAGGCCGTGCCGTGCCTGGGTCAGGCCAAAGCCCCGGGCCAGAGCCGAACCATTTGGCCATCTATAACCCATCTTGTATGTTGCACCCATACGCTTACTATCAAGTTTTATTGTACATGTTTGTCAAATTGTTACACTAGAACATTTTCTTCTCAAAATTTTTACATTTAATTACATTACATTTACCTGATAAGTTGATTACCATTCTGTTTACCCCCACAAAATTTCGCCCAGGTGCTACTGGGCGATATTCACATGTATGGCTCAAAATACTCAGGTCCACATGAAACTTCGCGAGAAATTGGCACGCATCTCATCATGGTATGGGCTGGGTATTAGGCTGGCTTTAACCCGTCGCTGGATTAAAGCCGGTAACGTCAACCAAACGATATTCCTAACATGCGTGTTATAAGTACTTATTATATTTGTGAGTTTGTTAATCAGAGGTTGCAATGTCTCTTTACACTGAAATCAACACCATCTTATAATCATACTAGATCACAAGGGGGTGAGACAAGGACCATTAAGCAACTCACTCGTGGGGGCAACATGATGCTTTGCACTGAACTAAAATCGAATCTAGTCTTTGAGCATATCATTAGCCACTCACGCAACGTATCAGCCGCACTCGTCGTGCGCACGCCGTCTCGCCGGACGGACGGCAGGTCCGGAGCCACTGGTGCTCGCTGTAGATAAGAAACGGTTCCCACCGATGGGATAATAGTTTTGAATGATAAAAAGTTGCTTCAATAATATTTTTGTGAAAACACTTGAGAACCAAGCATCACTAGCTACTGCCCATGTCCTGATTCATTGTACTAGATTATAGATTATGTCACATCTCGATTCTAGGTTGGGTTTTTCTTGGGTTGGAGTAAAATTTTAGGTCTAGGGCAAGTCGTACGTGTCTATCCCAGAAGGTTGAATTCAGAAAAAAAATGATTAAATTCATGTAAAATCCGTTTATCTTTTCATATTTTTGTTTGCAAATTTCCAAATTCTTTTGCATTGCAAAATTGTGAACCCCTGCTGCCACTGCTTCTTGGCAGCTGTGTCTTACTGCCGGATTGTCCATTTTTGCGGAATCGAGCAGCACTAATGAAAGCAAATGCTTTACACGGCGAAAAGCACCGTGCGCTCATGCCCACCGTATAACATGTCGGAATTTCTAGCGCTTTCATGCAAACACAATCATGGCCACGCTTGGCGCGAACCAACCACCGTGAGAGTCACCCGAGTGGCCGCTTCTCCAAGGAGACGACGTACTACATGGCGCTCGTCGTCCTCGTCCTCGTCCTCTCCCTCGCCGCTGCCGTCGTCGTCACCGGCGCCGGCGGTGGCGCGCTCGACTTCCGTGCCGACCTCGACCACCCCTACGCCGGGTCGTCACTGTCGAGGCACGACGTCGTGCGCCACGGCGCCCGCGCCAGCAAGACCCGGGCGGCGTGGCTCACCGCCAAGCTCGCCGGCGTCCTCAGCAACAGACGCGGGGGCGTCTCGCCGGCCGACGTGCGGCTGTCCCCGCTCAGCGACCAGGGACACTCGCTGACCGTCGGCATCGGCACGCCACCGCAGCCGCGCAAGCTCATCGTGGACACCGGCAGCGACCTCATCTGGACGCAGTGCAAGCTGTCCTCCTCCACCGCCGTGGCGGCGAGGCACGGCTCGCCGCCGGTCTACGACCCCGGCGAGTCCTCCACTTTCGCCTTCCTCCCCTGCAGCGACAGGCTGTGCCAGGAGGGGCAGTTCAGCTTCAAGAACTGCACCAGCAAGAACAGGTGCGTCTACGAGGACGTGTACGGCAGCGCGGCGGCCGTCGGCGTCCTCGCGTCGGAGACCTTCACCTTCGGCGCGCGCCGCGCCGTCTCCCTCCGCCTCGGCTTCGGCTGCGGCGCGCTCTCCGCCGGAAGCCTCATCGGCGCCACCGGCATCCTGGGGCTTAGCCCGGAGAGCTTGTCCCTCATCACGCAGCTGAAAATACAGAGATTCTCCTACTGCCTCACCCCTTTCGCCGACAAGAAGACGAGCCCGTTGCTGTTCGGCGCAATGGCCGACCTGTCCAGGCACAAGACGACGAGGCCGATCCAAACCACCGCGATAGTGAGCAATCCGGTGAAGACCGTCTACTACTACGTGCCGCTGGTTGGCATCTCGCTCGGGCACAAGCGGCTCGCCGTGCCGGCGGCGAGCCTCGCAATGAGGCCCGACGGCGGCGGCGGCACGATCGTCGACTCTGGCAGCACGGTGGCGTACCTCGTGGAGGCGGCGTTCGAGGCCGTCAAGGAGGCCGTGATGGACGTGGTGAGGCTGCCGGTGGCGAACCGGACCGTCGAGGACTACGAGCTCTGCTTCGTGCTGCCGCGCCGCACGGCTGCGGCGGCGATGGAGGCGGTGCAGGTTCCGCCGCTGGTGCTGCACTTCGACGGCGGCGCGGCGATGGTGCTGCCGCGGGACAACTACTTCCAGGAGCCGAGAGCCGGGCTGATGTGCCTGGCCGTGGGCAAGACGACGGACGGCTCCGGCGTGTCCATCATCGGCAACGTCCAGCAGCAGAACATGCACGTACTCTTCGATGTGCAACACCACAAGTTCTCCTTTGCGCCCACGCAGTGTGATCAAATCTGAAACACTCTTACTACTAACACAGTTGTTCTTACAATTTTCCCTTTTATTTTTCCCTGAAAATGTTATTAGCCTTCCGGATTAAGATATCCAATAATAAAAAGGATTCATCGATC
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| CDS seq | ATGGCAAGTCCAGTGTTGGTGCTGGCTCTCGTTGCGGCGACGCTATTGCCGGCCTCACATTGCAGCGTCAGCGGCGTCGGTTTCCAGCTCAAACTCCGACACGTCGACGCACACGGCAGCTACACCAAGCTGGAGCTTGTCACCCGCGCCATCCGCCGGAGCAGAGCCCGCGTGGCGGCGCTGCAGGCCGTCGCCGCCGCGGCGGCGACGGTGGCGCCCGTGGTGGACCCGATCACCGCGGCGAGGATACTGGTGGCGGCGAGCCAGGGGGAGTACCTGATGGACCTCGCCATCGGCACGCCGCCGCTGCGCTACACGGCCATGGTGGACACCGGCAGCGACCTCATCTGGACGCAGTGCGCGCCGTGCGTGCTCTGCGCCGACCAGCCCACGCCCTACTTCCGGCCGGCGAGGTCCGCCACGTACCGGCTCGTGCCGTGCCGGTCGCCGCTGTGCGCCGCGCTGCCGTACCCGGCATGCTTCCAGAGATCAGTGTGCGTGTACCAGTACTACTACGGCGACGAGGCGTCCACCGCCGGCGTCCTCGCCAGCGAGACCTTCACGTTCGGCGCGGCCAACTCGAGCAAGGTCATGGTGTCCGACGTCGCGTTCGGCTGCGGCAACATCAACTCGGGCCAGCTCGCCAACAGCTCCGGCATGGTCGGCCTCGGCCGCGGGCCGCTGTCGCTGGTGAGCCAGCTCGGCCCGTCGAGGTTCTCCTACTGCCTCACGTCGTTCCTCTCGCCGGAGCCGAGCCGGCTCAACTTCGGCGTGTTCGCGACGCTCAACGGCACCAACGCAAGCTCCTCCGGCTCGCCGGTGCAGTCCACGCCGCTGGTCGTCAACGCGGCGCTGCCGTCCCTCTACTTCATGTCCCTCAAGGGCATCAGCCTCGGCCAGAAGCGGCTGCCCATCGACCCGCTGGTGTTCGCCATCAACGACGACGGCACGGGCGGCGTCTTCATCGACTCCGGCACGTCGCTCACCTGGCTCCAGCAGGACGCGTACGACGCCGTGCGCCACGAGCTGGTGTCCGTCCTCCGGCCGCTGCCGCCGACGAACGACACCGAGATCGGCCTGGAGACGTGCTTCCCGTGGCCGCCGCCGCCGAGCGTGGCCGTGACGGTCCCGGACATGGAGCTCCACTTCGACGGCGGCGCCAACATGACCGTGCCGCCGGAGAACTACATGCTGATCGACGGCGCCACCGGGTTCCTGTGCCTGGCGATGATCCGCTCCGGCGACGCCACCATCATCGGCAACTACCAGCAGCAGAACATGCACATTTTGTACGACATCGCGAATAGCCTCTTGTCGTTCGTGCCGGCGCCGTGCAACATCGTGCACGACGTCGTGCGCCACGGCGCCCGCGCCAGCAAGACCCGGGCGGCGTGGCTCACCGCCAAGCTCGCCGGCGTCCTCAGCAACAGACGCGGGGGCGTCTCGCCGGCCGACGTGCGGCTGTCCCCGCTCAGCGACCAGGGACACTCGCTGACCGTCGGCATCGGCACGCCACCGCAGCCGCGCAAGCTCATCGTGGACACCGGCAGCGACCTCATCTGGACGCAGTGCAAGCTGTCCTCCTCCACCGCCGTGGCGGCGAGGCACGGCTCGCCGCCGGTCTACGACCCCGGCGAGTCCTCCACTTTCGCCTTCCTCCCCTGCAGCGACAGGCTGTGCCAGGAGGGGCAGTTCAGCTTCAAGAACTGCACCAGCAAGAACAGGTGCGTCTACGAGGACGTGTACGGCAGCGCGGCGGCCGTCGGCGTCCTCGCGTCGGAGACCTTCACCTTCGGCGCGCGCCGCGCCGTCTCCCTCCGCCTCGGCTTCGGCTGCGGCGCGCTCTCCGCCGGAAGCCTCATCGGCGCCACCGGCATCCTGGGGCTTAGCCCGGAGAGCTTGTCCCTCATCACGCAGCTGAAAATACAGAGATTCTCCTACTGCCTCACCCCTTTCGCCGACAAGAAGACGAGCCCGTTGCTGTTCGGCGCAATGGCCGACCTGTCCAGGCACAAGACGACGAGGCCGATCCAAACCACCGCGATAGTGAGCAATCCGGTGAAGACCGTCTACTACTACGTGCCGCTGGTTGGCATCTCGCTCGGGCACAAGCGGCTCGCCGTGCCGGCGGCGAGCCTCGCAATGAGGCCCGACGGCGGCGGCGGCACGATCGTCGACTCTGGCAGCACGGTGGCGTACCTCGTGGAGGCGGCGTTCGAGGCCGTCAAGGAGGCCGTGATGGACGTGGTGAGGCTGCCGGTGGCGAACCGGACCGTCGAGGACTACGAGCTCTGCTTCGTGCTGCCGCGCCGCACGGCTGCGGCGGCGATGGAGGCGGTGCAGGTTCCGCCGCTGGTGCTGCACTTCGACGGCGGCGCGGCGATGGTGCTGCCGCGGGACAACTACTTCCAGGAGCCGAGAGCCGGGCTGATGTGCCTGGCCGTGGGCAAGACGACGGACGGCTCCGGCGTGTCCATCATCGGCAACGTCCAGCAGCAGAACATGCACGTACTCTTCGATGTGCAACACCACAAGTTCTCCTTTGCGCCCACGCAGTGTGATCAAATCTGA
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| Protein seq | MASPVLVLALVAATLLPASHCSVSGVGFQLKLRHVDAHGSYTKLELVTRAIRRSRARVAALQAVAAAAATVAPVVDPITAARILVAASQGEYLMDLAIGTPPLRYTAMVDTGSDLIWTQCAPCVLCADQPTPYFRPARSATYRLVPCRSPLCAALPYPACFQRSVCVYQYYYGDEASTAGVLASETFTFGAANSSKVMVSDVAFGCGNINSGQLANSSGMVGLGRGPLSLVSQLGPSRFSYCLTSFLSPEPSRLNFGVFATLNGTNASSSGSPVQSTPLVVNAALPSLYFMSLKGISLGQKRLPIDPLVFAINDDGTGGVFIDSGTSLTWLQQDAYDAVRHELVSVLRPLPPTNDTEIGLETCFPWPPPPSVAVTVPDMELHFDGGANMTVPPENYMLIDGATGFLCLAMIRSGDATIIGNYQQQNMHILYDIANSLLSFVPAPCNIVHDVVRHGARASKTRAAWLTAKLAGVLSNRRGGVSPADVRLSPLSDQGHSLTVGIGTPPQPRKLIVDTGSDLIWTQCKLSSSTAVAARHGSPPVYDPGESSTFAFLPCSDRLCQEGQFSFKNCTSKNRCVYEDVYGSAAAVGVLASETFTFGARRAVSLRLGFGCGALSAGSLIGATGILGLSPESLSLITQLKIQRFSYCLTPFADKKTSPLLFGAMADLSRHKTTRPIQTTAIVSNPVKTVYYYVPLVGISLGHKRLAVPAASLAMRPDGGGGTIVDSGSTVAYLVEAAFEAVKEAVMDVVRLPVANRTVEDYELCFVLPRRTAAAAMEAVQVPPLVLHFDGGAAMVLPRDNYFQEPRAGLMCLAVGKTTDGSGVSIIGNVQQQNMHVLFDVQHHKFSFAPTQCDQI |
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| Function | Aspartic proteinase nepenthesin-1 [UniProtKB/Swiss-Prot:Q766C3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_08g0018800 | OsIR64_08g0018800.01 | Chr08 | 24652280 | 24657868 | + | NAM | ||
| CDS seq | ATGGCAAGTCCAGTGTTGGTGCTGGCTCTCGTTGCGGCGACGCTATTGCCGGCCTCACATTGCAGCGTCAGCGGCGTCGGTTTCCAGCTCAAACTCCGACACGTCGACGCACACGGCAGCTACACCAAGCTGGAGCTTGTCACCCGCGCCATCCGCCGGAGCAGAGCCCGCGTGGCGGCGCTGCAGGCCGTCGCCGCCGCGGCGGCGACGGTGGCGCCCGTGGTGGACCCGATCACCGCGGCGAGGATACTGGTGGCGGCGAGCCAGGGGGAGTACCTGATGGACCTCGCCATCGGCACGCCGCCGCTGCGCTACACGGCCATGGTGGACACCGGCAGCGACCTCATCTGGACGCAGTGCGCGCCGTGCGTGCTCTGCGCCGACCAGCCCACGCCCTACTTCCGGCCGGCGAGGTCCGCCACGTACCGGCTCGTGCCGTGCCGGTCGCCGCTGTGCGCCGCGCTGCCGTACCCGGCATGCTTCCAGAGATCAGTGTGCGTGTACCAGTACTACTACGGCGACGAGGCGTCCACCGCCGGCGTCCTCGCCAGCGAGACCTTCACGTTCGGCGCGGCCAACTCGAGCAAGGTCATGGTGTCCGACGTCGCGTTCGGCTGCGGCAACATCAACTCGGGCCAGCTCGCCAACAGCTCCGGCATGGTCGGCCTCGGCCGCGGGCCGCTGTCGCTGGTGAGCCAGCTCGGCCCGTCGAGGTTCTCCTACTGCCTCACGTCGTTCCTCTCGCCGGAGCCGAGCCGGCTCAACTTCGGCGTGTTCGCGACGCTCAACGGCACCAACGCAAGCTCCTCCGGCTCGCCGGTGCAGTCCACGCCGCTGGTCGTCAACGCGGCGCTGCCGTCCCTCTACTTCATGTCCCTCAAGGGCATCAGCCTCGGCCAGAAGCGGCTGCCCATCGACCCGCTGGTGTTCGCCATCAACGACGACGGCACGGGCGGCGTCTTCATCGACTCCGGCACGTCGCTCACCTGGCTCCAGCAGGACGCGTACGACGCCGTGCGCCACGAGCTGGTGTCCGTCCTCCGGCCGCTGCCGCCGACGAACGACACCGAGATCGGCCTGGAGACGTGCTTCCCGTGGCCGCCGCCGCCGAGCGTGGCCGTGACGGTCCCGGACATGGAGCTCCACTTCGACGGCGGCGCCAACATGACCGTGCCGCCGGAGAACTACATGCTGATCGACGGCGCCACCGGGTTCCTGTGCCTGGCGATGATCCGCTCCGGCGACGCCACCATCATCGGCAACTACCAGCAGCAGAACATGCACATTTTGTACGACATCGCGAATAGCCTCTTGTCGTTCGTGCCGGCGCCGTGCAACATCGTGCACGACGTCGTGCGCCACGGCGCCCGCGCCAGCAAGACCCGGGCGGCGTGGCTCACCGCCAAGCTCGCCGGCGTCCTCAGCAACAGACGCGGGGGCGTCTCGCCGGCCGACGTGCGGCTGTCCCCGCTCAGCGACCAGGGACACTCGCTGACCGTCGGCATCGGCACGCCACCGCAGCCGCGCAAGCTCATCGTGGACACCGGCAGCGACCTCATCTGGACGCAGTGCAAGCTGTCCTCCTCCACCGCCGTGGCGGCGAGGCACGGCTCGCCGCCGGTCTACGACCCCGGCGAGTCCTCCACTTTCGCCTTCCTCCCCTGCAGCGACAGGCTGTGCCAGGAGGGGCAGTTCAGCTTCAAGAACTGCACCAGCAAGAACAGGTGCGTCTACGAGGACGTGTACGGCAGCGCGGCGGCCGTCGGCGTCCTCGCGTCGGAGACCTTCACCTTCGGCGCGCGCCGCGCCGTCTCCCTCCGCCTCGGCTTCGGCTGCGGCGCGCTCTCCGCCGGAAGCCTCATCGGCGCCACCGGCATCCTGGGGCTTAGCCCGGAGAGCTTGTCCCTCATCACGCAGCTGAAAATACAGAGATTCTCCTACTGCCTCACCCCTTTCGCCGACAAGAAGACGAGCCCGTTGCTGTTCGGCGCAATGGCCGACCTGTCCAGGCACAAGACGACGAGGCCGATCCAAACCACCGCGATAGTGAGCAATCCGGTGAAGACCGTCTACTACTACGTGCCGCTGGTTGGCATCTCGCTCGGGCACAAGCGGCTCGCCGTGCCGGCGGCGAGCCTCGCAATGAGGCCCGACGGCGGCGGCGGCACGATCGTCGACTCTGGCAGCACGGTGGCGTACCTCGTGGAGGCGGCGTTCGAGGCCGTCAAGGAGGCCGTGATGGACGTGGTGAGGCTGCCGGTGGCGAACCGGACCGTCGAGGACTACGAGCTCTGCTTCGTGCTGCCGCGCCGCACGGCTGCGGCGGCGATGGAGGCGGTGCAGGTTCCGCCGCTGGTGCTGCACTTCGACGGCGGCGCGGCGATGGTGCTGCCGCGGGACAACTACTTCCAGGAGCCGAGAGCCGGGCTGATGTGCCTGGCCGTGGGCAAGACGACGGACGGCTCCGGCGTGTCCATCATCGGCAACGTCCAGCAGCAGAACATGCACGTACTCTTCGATGTGCAACACCACAAGTTCTCCTTTGCGCCCACGCAGTGTGATCAAATCTGA
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| Protein seq | MASPVLVLALVAATLLPASHCSVSGVGFQLKLRHVDAHGSYTKLELVTRAIRRSRARVAALQAVAAAAATVAPVVDPITAARILVAASQGEYLMDLAIGTPPLRYTAMVDTGSDLIWTQCAPCVLCADQPTPYFRPARSATYRLVPCRSPLCAALPYPACFQRSVCVYQYYYGDEASTAGVLASETFTFGAANSSKVMVSDVAFGCGNINSGQLANSSGMVGLGRGPLSLVSQLGPSRFSYCLTSFLSPEPSRLNFGVFATLNGTNASSSGSPVQSTPLVVNAALPSLYFMSLKGISLGQKRLPIDPLVFAINDDGTGGVFIDSGTSLTWLQQDAYDAVRHELVSVLRPLPPTNDTEIGLETCFPWPPPPSVAVTVPDMELHFDGGANMTVPPENYMLIDGATGFLCLAMIRSGDATIIGNYQQQNMHILYDIANSLLSFVPAPCNIVHDVVRHGARASKTRAAWLTAKLAGVLSNRRGGVSPADVRLSPLSDQGHSLTVGIGTPPQPRKLIVDTGSDLIWTQCKLSSSTAVAARHGSPPVYDPGESSTFAFLPCSDRLCQEGQFSFKNCTSKNRCVYEDVYGSAAAVGVLASETFTFGARRAVSLRLGFGCGALSAGSLIGATGILGLSPESLSLITQLKIQRFSYCLTPFADKKTSPLLFGAMADLSRHKTTRPIQTTAIVSNPVKTVYYYVPLVGISLGHKRLAVPAASLAMRPDGGGGTIVDSGSTVAYLVEAAFEAVKEAVMDVVRLPVANRTVEDYELCFVLPRRTAAAAMEAVQVPPLVLHFDGGAAMVLPRDNYFQEPRAGLMCLAVGKTTDGSGVSIIGNVQQQNMHVLFDVQHHKFSFAPTQCDQI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_08g0018800 | OsIR64_08g0018800.02 | Chr08 | 24656427 | 24657981 | + | IsoSeq | ||
| CDS seq | AAACACAATCATGGCCACGCTTGGCGCGAACCAACCACCGTGAGAGTCACCCGAGTGGCCGCTTCTCCAAGGAGACGACGTACTACATGGCGCTCGTCGTCCTCGTCCTCGTCCTCTCCCTCGCCGCTGCCGTCGTCGTCACCGGCGCCGGCGGTGGCGCGCTCGACTTCCGTGCCGACCTCGACCACCCCTACGCCGGGTCGTCACTGTCGAGGCACGACGTCGTGCGCCACGGCGCCCGCGCCAGCAAGACCCGGGCGGCGTGGCTCACCGCCAAGCTCGCCGGCGTCCTCAGCAACAGACGCGGGGGCGTCTCGCCGGCCGACGTGCGGCTGTCCCCGCTCAGCGACCAGGGACACT
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| Protein seq | KHNHGHAWREPTTVRVTRVAASPRRRRTTWRSSSSSSSSPSPLPSSSPAPAVARSTSVPTSTTPTPGRHCRGTTSCATAPAPARPGRRGSPPSSPASSATDAGASRRPTCGCPRSATRDT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.202542 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0469100 | RBH | 0.0 | 0.192894 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g36530 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0469000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0019020 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0018900 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0018820 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0019030 | RBH | 0.131430 | 0.036277 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0018880 | RBH | 0.0 | 10.103371 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0367300 | RBH | 0.0085815 | 0.2180535 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0012550 | SBH | 0.067155 | 0.0 | 0.331080 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0386100 | RBH | 0.0423935 | 0.023969 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0018120 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0018390 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0018240 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0019090 | RBH | 0.0 | 0.913351 | 0.141000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0018450 | RBH | 0.042027 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G018630 | SBH | 0.0 | 0.0 | 0.456389 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0018730 | SBH | 0.0 | 0.0 | 0.0 |
