Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsIR64_07g0017990 OGI:07053150 | 13/16 IR 64 | OsIR64RS1 | Gramene(+IsoSeq) Chr07:21970636-21971019
Gene Symbol -
DNA seq

ATGGCTTCGATTTGTCACCTATGCTTGGCTGACGGTGAATCCTGCCCACACATCTTCCACGACTGCCCCTTCACGCAGCAAGTTTGGACGCGGATTCATAGCCGGCTGGACCTCCCCTGTTCCACACCATCGGAGGGTTTAATCAATTGGTGGTACACGGCTCGCAAAATTGTGCACAAGCAGGACCGAAAAACCTTCGACGCCGGGGTGATTCTTGTGACGTGGCTTGTTTCGAAAGAACGCAATGCTAGAATCTTCGACGGAAAAGCTGCATCGGCGGAGCAGGTTTGCGCATCCATCGTGGAGGAATGGGAGTCTTGGAAGGCGGCGGGGCTTCTATGCGCGATCAGTGCGAGTGGCCCTCCGGTTGCTGGGATCGGCTAG

CDS seq

ATGGCTTCGATTTGTCACCTATGCTTGGCTGACGGTGAATCCTGCCCACACATCTTCCACGACTGCCCCTTCACGCAGCAAGTTTGGACGCGGATTCATAGCCGGCTGGACCTCCCCTGTTCCACACCATCGGAGGGTTTAATCAATTGGTGGTACACGGCTCGCAAAATTGTGCACAAGCAGGACCGAAAAACCTTCGACGCCGGGGTGATTCTTGTGACGTGGCTTGTTTCGAAAGAACGCAATGCTAGAATCTTCGACGGAAAAGCTGCATCGGCGGAGCAGGTTTGCGCATCCATCGTGGAGGAATGGGAGTCTTGGAAGGCGGCGGGGCTTCTATGCGCGATCAGTGCGAGTGGCCCTCCGGTTGCTGGGATCGGCTAG

Protein seq

MASICHLCLADGESCPHIFHDCPFTQQVWTRIHSRLDLPCSTPSEGLINWWYTARKIVHKQDRKTFDAGVILVTWLVSKERNARIFDGKAASAEQVCASIVEEWESWKAAGLLCAISASGPPVAGIG

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsIR64_07g0017990 OsIR64_07g0017990.01 Chr07 21970636 21971019 + NAM
CDS seq

ATGGCTTCGATTTGTCACCTATGCTTGGCTGACGGTGAATCCTGCCCACACATCTTCCACGACTGCCCCTTCACGCAGCAAGTTTGGACGCGGATTCATAGCCGGCTGGACCTCCCCTGTTCCACACCATCGGAGGGTTTAATCAATTGGTGGTACACGGCTCGCAAAATTGTGCACAAGCAGGACCGAAAAACCTTCGACGCCGGGGTGATTCTTGTGACGTGGCTTGTTTCGAAAGAACGCAATGCTAGAATCTTCGACGGAAAAGCTGCATCGGCGGAGCAGGTTTGCGCATCCATCGTGGAGGAATGGGAGTCTTGGAAGGCGGCGGGGCTTCTATGCGCGATCAGTGCGAGTGGCCCTCCGGTTGCTGGGATCGGCTAG

More
Protein seq

MASICHLCLADGESCPHIFHDCPFTQQVWTRIHSRLDLPCSTPSEGLINWWYTARKIVHKQDRKTFDAGVILVTWLVSKERNARIFDGKAASAEQVCASIVEEWESWKAAGLLCAISASGPPVAGIG

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g31530 RBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0017620 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0017520 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0017380 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0017490 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0330800 RBH 0.0705185 0.0342155 0.0039365
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0375400 RBH 2.887895 0.0457425 0.7429575
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0017220 RBH 0.0 0.247276 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0017380 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0017640 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0017420 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G017370 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0018730 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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