Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsIR64_07g0005850 OGI:07013430 | 16/16 IR 64 | OsIR64RS1 | Gramene(+IsoSeq) Chr07:4930542-4933512
Gene Symbol WNK3, OsWNK3
DNA seq

GTACCCCTTGGATAAGAATGCCACCCTAATATTTCTTCTTTGAATAAGAGGCGTACCAAATATGAATGAAGAACATATGCATCTTTCCTGATTGCACTTTCTTGCACTACTGATTTATGGTCAGAGAATGCTAGATACAGCCATGCATGTAACTAACTGAAGCCAATGAAGATTGGAAGTAATTGCACTTGGCCTACCTAAACTGTACCCTATCTTCTTCAGATTCATAGCACAGTCACAAAACGTTATACTACATCTTTTTCAGTTTCTTCCCTACAATATATGCTAAATCTCTGAAAAAAAGACGAGCAAATCCAATCTTGAAACTGTAGATTTACTTTGTCAGAAGGGCATGTCGAACGTCAGTAGCATTGTTCAACAGTACAGACTTTGTTGCTCTTGCAATGTGTCGGCAAGGTAACCTCTGAAAGTGAGCAGCGGCTGATCGAGATTGCTGTCAGCAATTCCCCCCTCACAATGAGCAATTCCCCCTCACAATGATCATGAATCCTTTGAGCTACCATGGTCATGATCATGGTGGCGGCACCGACTCGCGCCATTGCTCAAATCCAAGAACCCATCAATGGTTGTAAACATCAGCGTCGAATTGCTCGATCTTTGGATGTTCATCATCATCATACTGAATTACTGATCATGGCTGTTCTGAACCTTGTACTGTGCCATCTTGTGCAATGCCATTGATGTTCATGACCTCCTTGTCCTTGCCCATGGCGTGCTGCTCATGGTTGCTGCCTCCGGTGTCAGAGGAGCTCCCCTGCAAATGCTGCTCCTCTTCGTCGTCGTCGGCTTGGAACGTGATCTCCTCAAACCGGCCGTGCAGCTCGGCGCACCGCCTGCAGCCATGGCGCTCCGCCGCCGCCGCCGATGACATAAAGTCGACGAGCGAGCCGCAGGACGACGACGACGACGACGCCGCCGGCCGGCAGTTCTTGCAGCAGGCGGCGGCGGCGCCGCCCGGCGCGTCCGGATCATCGCCGCCGCCGACGAGATCGTCGTCGTCGTCGTCGTCCGTCGCTGGACCCGGCCTCCAGCCCGGCACCAGCGCGGCGACCTTGCCGTCGATCAGCTGGGCGATGCGAGTCACCTCGTGGTCGGTGATGTCCAGCTCGGCGACCATCTCCGCCGCCACGGTCATCGCCGTGTCGGCCTCGGTGTCGAACCGGAAGCAGATTATCCGGCCACGCCCTGCCACAATTCAGCTCGAATTCAGACGAAATTCGCCCCCACATTTGACATCATTTTGTATTATAAATCAAATCAAATTTGAACACCCGCCAGTTCAAAAATGCAACGATCACGTACCTGTGCCGTTCTTGTCGGCGATGCGCAGGCCGAGGTAGACGCCGCCGTCGTCCGTCCTCCTCCCCTTGATGGTGATGTCCACGCCACCGACACGCTCGTCGGCGTCGGCGGCGGCGGCGTCGTCGTCGTCCTCGTCGAACAGCATGTGGATGTCGCGGAGCCAGTTGTCACCGTCGTCGTCCCCCGGCTGCACGGCCGCGTCCACGTCGTTGTCGCCGACGCTATTCGACGGCGACAAGCCGCCATTGCTGCAGGCATGGTGGTCGTCGATGCAAGCAGGCTGGTGCAGGTAGTTGTACATCAGATTGTAGTAGCCAACGCCAACACCGCCATGTCCATCGCCGCCGTCGCCGGAGAAGAAGCCATCATCCTCAAGCGGCAGCAGGAACGGGTCGTCGAGCAGCTCCCTCGCCGCCGGCCGCCGCGCCGCCGGGGCGAGGCACCGTTCGATGAATTGCCTCACCACCGGGTCGCTCACCCTGTACAACGCCGCGGGCTTGATCCCCTGATCAGAAACACGCATTCTCTTGATCAAATCGTGTCCAAGAATTCACGAGAAATTCTGTGGTGATCAGATCATACGGAGATGACTCGCTTGTAGATTTGGATGGGATTGGAGCACTCGCTGTAGGGGTAATCGAGGGTGACCATCTCGAGGACGCACATGCCGAAGGAGTAGACGTCGGCGAGCTCGTCGTAGGACTCGTCGTACACCTCGGGAGCCATGAACTCCGGCGTGCCGACGCAGCGGGCGTGGCCGCCGCCGCGGCGGAACGCGGCGAGGCCGAGGTCGCCGATCTTGACCTCGCCCTGGTTGCCGTTGACGAAGATGTTGTCGCACTTGAGGTCGCGATGGATGATGGGCGGCGAGTGGGCGTGGAGGTAGGCGAGGCCGTCGAGGATCTGCGCGCACCAGCGCCGCACCGCCGCCGCGCTCACCCGCCGGTGCCTCTCCCTGTACTGGCGGAGCGTGCCGGAGACGAAGAGCTCGGTGACGAAGTTGAGGGCGCGGCGCGGCGCGTCCACCCAGTAGGCGTGGAGGCGCACGATGCCGCGGTGGCGGAGCGCGGCGAGGAGGTGGACCTCGCCGTAGAACCGCTCCAGCTCGCCGCCGCCCCGCACGACGTCGCGCAGCCGCACCTGGTTCCACGCCACCTCCACTCCCCTCCACTCATCGAACCCCCTATACCTGCACCCGAAAAATCATTCCAAAATCAATCAAACACTCAAATTCTAATCAAGAAACACAATCAAACAGAGGATTAAACTAATTTAGGAGAATAAATTGGATCATCTGATGAACTTACACAATCTTTGACGATCCCTTGCCAAGAATCTCATTGAACTGCAGAGAGAGAGAGGAAGCATTAAGAAACAAGGTAAGAAGAAGCTGGAGGAAGAAGACGATGAGATGGGATTAGTAGATGATTACTCTGCCATATCTTCCAGTGGGATCAACCTCGGCATAGCCAGCCTCAGCGAGGAGGACGCCATGGCCATGGCCATTGCTCTGCTGCTGCAGGGCTCCCATCATTCTACACACACTCTGCTCAGCTCAGCAGCAACACATCTCCATTGATCCACTCAAGAAGAACTCGTGAGCGTGGCACGTCGATCTCGAGGAGATGGAGGTAGAGAGAGAGAGGAG

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CDS seq

ATGATGGGAGCCCTGCAGCAGCAGAGCAATGGCCATGGCCATGGCGTCCTCCTCGCTGAGGCTGGCTATGCCGAGGTTGATCCCACTGGAAGATATGGCAGATTCAATGAGATTCTTGGCAAGGGATCGTCAAAGATTGTGTATAGGGGGTTCGATGAGTGGAGGGGAGTGGAGGTGGCGTGGAACCAGGTGCGGCTGCGCGACGTCGTGCGGGGCGGCGGCGAGCTGGAGCGGTTCTACGGCGAGGTCCACCTCCTCGCCGCGCTCCGCCACCGCGGCATCGTGCGCCTCCACGCCTACTGGGTGGACGCGCCGCGCCGCGCCCTCAACTTCGTCACCGAGCTCTTCGTCTCCGGCACGCTCCGCCAGTACAGGGAGAGGCACCGGCGGGTGAGCGCGGCGGCGGTGCGGCGCTGGTGCGCGCAGATCCTCGACGGCCTCGCCTACCTCCACGCCCACTCGCCGCCCATCATCCATCGCGACCTCAAGTGCGACAACATCTTCGTCAACGGCAACCAGGGCGAGGTCAAGATCGGCGACCTCGGCCTCGCCGCGTTCCGCCGCGGCGGCGGCCACGCCCGCTGCGTCGGCACGCCGGAGTTCATGGCTCCCGAGGTGTACGACGAGTCCTACGACGAGCTCGCCGACGTCTACTCCTTCGGCATGTGCGTCCTCGAGATGGTCACCCTCGATTACCCCTACAGCGAGTGCTCCAATCCCATCCAAATCTACAAGCGAGTCATCTCCGGGATCAAGCCCGCGGCGTTGTACAGGGTGAGCGACCCGGTGGTGAGGCAATTCATCGAACGGTGCCTCGCCCCGGCGGCGCGGCGGCCGGCGGCGAGGGAGCTGCTCGACGACCCGTTCCTGCTGCCGCTTGAGGATGATGGCTTCTTCTCCGGCGACGGCGGCGATGGACATGGCGGTGTTGGCGTTGGCTACTACAATCTGATGTACAACTACCTGCACCAGCCTGCTTGCATCGACGACCACCATGCCTGCAGCAATGGCGGCTTGTCGCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCCGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCGACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTTATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGA

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Protein seq

MMGALQQQSNGHGHGVLLAEAGYAEVDPTGRYGRFNEILGKGSSKIVYRGFDEWRGVEVAWNQVRLRDVVRGGGELERFYGEVHLLAALRHRGIVRLHAYWVDAPRRALNFVTELFVSGTLRQYRERHRRVSAAAVRRWCAQILDGLAYLHAHSPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAFRRGGGHARCVGTPEFMAPEVYDESYDELADVYSFGMCVLEMVTLDYPYSECSNPIQIYKRVISGIKPAALYRVSDPVVRQFIERCLAPAARRPAARELLDDPFLLPLEDDGFFSGDGGDGHGGVGVGYYNLMYNYLHQPACIDDHHACSNGGLSPSNSVGDNDVDAAVQPGDDDGDNWLRDIHMLFDEDDDDAAAADADERVGGVDITIKGRRTDDGGVYLGLRIADKNGTGRGRIICFRFDTEADTAMTVAAEMVAELDITDHEVTRIAQLIDGKVAALVPGWRPGPATDDDDDDDLVGGGDDPDAPGGAAAACCKNCRPAASSSSSSCGSLVDFMSSAAAAERHGCRRCAELHGRFEEITFQADDDEEEQHLQGSSSDTGGSNHEQHAMGKDKEVMNINGIAQDGTVQGSEQP

Function Probable serine/threonine-protein kinase WNK3 [UniProtKB/Swiss-Prot:Q0D847]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsIR64_07g0005850 OsIR64_07g0005850.01 Chr07 4930542 4933493 - NAM
CDS seq

ATGATGGGAGCCCTGCAGCAGCAGAGCAATGGCCATGGCCATGGCGTCCTCCTCGCTGAGGCTGGCTATGCCGAGGTTGATCCCACTGGAAGATATGGCAGATTCAATGAGATTCTTGGCAAGGGATCGTCAAAGATTGTGTATAGGGGGTTCGATGAGTGGAGGGGAGTGGAGGTGGCGTGGAACCAGGTGCGGCTGCGCGACGTCGTGCGGGGCGGCGGCGAGCTGGAGCGGTTCTACGGCGAGGTCCACCTCCTCGCCGCGCTCCGCCACCGCGGCATCGTGCGCCTCCACGCCTACTGGGTGGACGCGCCGCGCCGCGCCCTCAACTTCGTCACCGAGCTCTTCGTCTCCGGCACGCTCCGCCAGTACAGGGAGAGGCACCGGCGGGTGAGCGCGGCGGCGGTGCGGCGCTGGTGCGCGCAGATCCTCGACGGCCTCGCCTACCTCCACGCCCACTCGCCGCCCATCATCCATCGCGACCTCAAGTGCGACAACATCTTCGTCAACGGCAACCAGGGCGAGGTCAAGATCGGCGACCTCGGCCTCGCCGCGTTCCGCCGCGGCGGCGGCCACGCCCGCTGCGTCGGCACGCCGGAGTTCATGGCTCCCGAGGTGTACGACGAGTCCTACGACGAGCTCGCCGACGTCTACTCCTTCGGCATGTGCGTCCTCGAGATGGTCACCCTCGATTACCCCTACAGCGAGTGCTCCAATCCCATCCAAATCTACAAGCGAGTCATCTCCGGGATCAAGCCCGCGGCGTTGTACAGGGTGAGCGACCCGGTGGTGAGGCAATTCATCGAACGGTGCCTCGCCCCGGCGGCGCGGCGGCCGGCGGCGAGGGAGCTGCTCGACGACCCGTTCCTGCTGCCGCTTGAGGATGATGGCTTCTTCTCCGGCGACGGCGGCGATGGACATGGCGGTGTTGGCGTTGGCTACTACAATCTGATGTACAACTACCTGCACCAGCCTGCTTGCATCGACGACCACCATGCCTGCAGCAATGGCGGCTTGTCGCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCCGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCGACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCCGGATAATCTGCTTCCGGTTCGACACCGAGGCCGACACGGCGATGACCGTGGCGGCGGAGATGGTCGCCGAGCTGGACATCACCGACCACGAGGTGACTCGCATCGCCCAGCTGATCGACGGCAAGGTCGCCGCGCTGGTGCCGGGCTGGAGGCCGGGTCCAGCGACGGACGACGACGACGACGACGATCTCGTCGGCGGCGGCGATGATCCGGACGCGCCGGGCGGCGCCGCCGCCGCCTGCTGCAAGAACTGCCGGCCGGCGGCGTCGTCGTCGTCGTCGTCCTGCGGCTCGCTCGTCGACTTTATGTCATCGGCGGCGGCGGCGGAGCGCCATGGCTGCAGGCGGTGCGCCGAGCTGCACGGCCGGTTTGAGGAGATCACGTTCCAAGCCGACGACGACGAAGAGGAGCAGCATTTGCAGGGGAGCTCCTCTGACACCGGAGGCAGCAACCATGAGCAGCACGCCATGGGCAAGGACAAGGAGGTCATGAACATCAATGGCATTGCACAAGATGGCACAGTACAAGGTTCAGAACAGCCATGA

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Protein seq

MMGALQQQSNGHGHGVLLAEAGYAEVDPTGRYGRFNEILGKGSSKIVYRGFDEWRGVEVAWNQVRLRDVVRGGGELERFYGEVHLLAALRHRGIVRLHAYWVDAPRRALNFVTELFVSGTLRQYRERHRRVSAAAVRRWCAQILDGLAYLHAHSPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAFRRGGGHARCVGTPEFMAPEVYDESYDELADVYSFGMCVLEMVTLDYPYSECSNPIQIYKRVISGIKPAALYRVSDPVVRQFIERCLAPAARRPAARELLDDPFLLPLEDDGFFSGDGGDGHGGVGVGYYNLMYNYLHQPACIDDHHACSNGGLSPSNSVGDNDVDAAVQPGDDDGDNWLRDIHMLFDEDDDDAAAADADERVGGVDITIKGRRTDDGGVYLGLRIADKNGTGRGRIICFRFDTEADTAMTVAAEMVAELDITDHEVTRIAQLIDGKVAALVPGWRPGPATDDDDDDDLVGGGDDPDAPGGAAAACCKNCRPAASSSSSSCGSLVDFMSSAAAAERHGCRRCAELHGRFEEITFQADDDEEEQHLQGSSSDTGGSNHEQHAMGKDKEVMNINGIAQDGTVQGSEQP

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Gene Transcript Chromosome Start End Strand Source
OsIR64_07g0005850 OsIR64_07g0005850.02 Chr07 4930722 4933493 - NAM
CDS seq

ATGATGGGAGCCCTGCAGCAGCAGAGCAATGGCCATGGCCATGGCGTCCTCCTCGCTGAGGCTGGCTATGCCGAGGTTGATCCCACTGGAAGATATGGCAGATTCAATGAGATTCTTGGCAAGGGATCGTCAAAGATTGTGTATAGGGGGTTCGATGAGTGGAGGGGAGTGGAGGTGGCGTGGAACCAGGTGCGGCTGCGCGACGTCGTGCGGGGCGGCGGCGAGCTGGAGCGGTTCTACGGCGAGGTCCACCTCCTCGCCGCGCTCCGCCACCGCGGCATCGTGCGCCTCCACGCCTACTGGGTGGACGCGCCGCGCCGCGCCCTCAACTTCGTCACCGAGCTCTTCGTCTCCGGCACGCTCCGCCAGTACAGGGAGAGGCACCGGCGGGTGAGCGCGGCGGCGGTGCGGCGCTGGTGCGCGCAGATCCTCGACGGCCTCGCCTACCTCCACGCCCACTCGCCGCCCATCATCCATCGCGACCTCAAGTGCGACAACATCTTCGTCAACGGCAACCAGGGCGAGGTCAAGATCGGCGACCTCGGCCTCGCCGCGTTCCGCCGCGGCGGCGGCCACGCCCGCTGCGTCGGCACGCCGGAGTTCATGGCTCCCGAGGTGTACGACGAGTCCTACGACGAGCTCGCCGACGTCTACTCCTTCGGCATGTGCGTCCTCGAGATGGTCACCCTCGATTACCCCTACAGCGAGTGCTCCAATCCCATCCAAATCTACAAGCGAGTCATCTCCGTATGA

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Protein seq

MMGALQQQSNGHGHGVLLAEAGYAEVDPTGRYGRFNEILGKGSSKIVYRGFDEWRGVEVAWNQVRLRDVVRGGGELERFYGEVHLLAALRHRGIVRLHAYWVDAPRRALNFVTELFVSGTLRQYRERHRRVSAAAVRRWCAQILDGLAYLHAHSPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAFRRGGGHARCVGTPEFMAPEVYDESYDELADVYSFGMCVLEMVTLDYPYSECSNPIQIYKRVISV

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Gene Transcript Chromosome Start End Strand Source
OsIR64_07g0005850 OsIR64_07g0005850.03 Chr07 4930604 4933512 - IsoSeq
CDS seq

ATGCCTGCAGCAATGGCGGCTTGTCGCCGTCGAATAGCGTCGGCGACAACGACGTGGACGCGGCCGTGCAGCCGGGGGACGACGACGGTGACAACTGGCTCCGCGACATCCACATGCTGTTCGACGAGGACGACGACGACGCCGCCGCCGCCGACGCCGACGAGCGTGTCGGTGGCGTGGACATCACCATCAAGGGGAGGAGGACGGACGACGGCGGCGTCTACCTCGGCCTGCGCATCGCCGACAAGAACGGCACAGGGCGTGGCC

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Protein seq

MPAAMAACRRRIASATTTWTRPCSRGTTTVTTGSATSTCCSTRTTTTPPPPTPTSVSVAWTSPSRGGGRTTAASTSACASPTRTAQGVA

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
RI Chr07 4931865 4933053 - OsIR64_07g0005850.02 OsIR64_07g0005850.01,OsIR64_07g0005850.02,OsIR64_07g0005850.03 All

Expression

Leaf Root Panicle
FPKM 0.113571 0.422710 1.075446

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0185000 RBH 0.284740 0.411126 3.500653
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g08750 RBH 0.090414 0.064919 0.848045
Nipponbare | IRGSP 1.0 | RAP-db Os07g0185000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0005380 RBH 0.191177 3.303924 2.613670
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0005340 RBH 0.237635 3.032763 1.590933
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0005250 RBH 0.076564 7.975309 3.677102
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0005170 RBH 0.049548 0.085689 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0005320 RBH 0.000000 15.001884 9.916385
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0076900 RBH 2.7898615 13.3251475 0.375186
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0012860 RBH 0.110046 0.000000 0.107826
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0079100 RBH 7.017464 7.8460735 0.4086205
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0005300 RBH 0.120671 0.181575 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0005300 RBH 0.288059 6.492631 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0005340 RBH 0.000000 13.932137 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0005400 RBH 0.0 0.837072 1.113402
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0005280 RBH 0.128609 3.101114 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G005460 RBH 0.0 2.546979 0.803617
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0005240 RBH 2.897086 17.252449 16.262178
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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