Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsIR64_06g0015040 OGI:04049090 | 3/16 IR 64 | OsIR64RS1 | Gramene(+IsoSeq) Chr06:15852398-15852721
Gene Symbol -
DNA seq

TCAAGGGTTGCGGGCGAAGAGGTTTCGTCCACCCACGCCCTTCGCCTTAGTGCCAATAAGGCACGGCGTCAAGGGTTGCGGGCGAACAGGTTTCGCCCACCCGTGCCCTTTGCCACAGTACCAATAAGGCACGGCGTCAAGGGCTGCGGGCGAAGAGGTTGCGCCACACGCCATACCCTTCGCCATAGTACCAATGAGGTACGGCGTCAAGGGTTGCGGGCGAACAAATTTCGCCCACCCACGCCCTTCGCCATAGTGCCAATATGGCACGGCGTCAAGGGCTGCGGGCGAAGAAGTTTCGCCACACGCCATACCCTTCGCCAT

CDS seq

ATGGCGAAGGGTATGGCGTGTGGCGAAACTTCTTCGCCCGCAGCCCTTGACGCCGTGCCATATTGGCACTATGGCGAAGGGCGTGGGTGGGCGAAATTTGTTCGCCCGCAACCCTTGACGCCGTACCTCATTGGTACTATGGCGAAGGGTATGGCGTGTGGCGCAACCTCTTCGCCCGCAGCCCTTGACGCCGTGCCTTATTGGTACTGTGGCAAAGGGCACGGGTGGGCGAAACCTGTTCGCCCGCAACCCTTGACGCCGTGCCTTATTGGCACTAAGGCGAAGGGCGTGGGTGGACGAAACCTCTTCGCCCGCAACCCTTGA

Protein seq

MAKGMACGETSSPAALDAVPYWHYGEGRGWAKFVRPQPLTPYLIGTMAKGMACGATSSPAALDAVPYWYCGKGHGWAKPVRPQPLTPCLIGTKAKGVGGRNLFARNP

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsIR64_06g0015040 OsIR64_06g0015040.01 Chr06 15852398 15852721 - NAM
CDS seq

ATGGCGAAGGGTATGGCGTGTGGCGAAACTTCTTCGCCCGCAGCCCTTGACGCCGTGCCATATTGGCACTATGGCGAAGGGCGTGGGTGGGCGAAATTTGTTCGCCCGCAACCCTTGACGCCGTACCTCATTGGTACTATGGCGAAGGGTATGGCGTGTGGCGCAACCTCTTCGCCCGCAGCCCTTGACGCCGTGCCTTATTGGTACTGTGGCAAAGGGCACGGGTGGGCGAAACCTGTTCGCCCGCAACCCTTGACGCCGTGCCTTATTGGCACTAAGGCGAAGGGCGTGGGTGGACGAAACCTCTTCGCCCGCAACCCTTGA

More
Protein seq

MAKGMACGETSSPAALDAVPYWHYGEGRGWAKFVRPQPLTPYLIGTMAKGMACGATSSPAALDAVPYWYCGKGHGWAKPVRPQPLTPCLIGTKAKGVGGRNLFARNP

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.000000 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g11900 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0006940 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0007570 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0011630 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0015430 RBH 0.000000 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0015570 RBH 0.000000 0.000000 4.166964
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0238500 SBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0015050 SBH 0.000000 0.000000 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0099300 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_08g0014050 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0008040 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0003890 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0015800 RBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0003950 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_08G014210 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0008050 SBH 0.0 0.0 0.0
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.