Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_04g0002440 | OGI:04011900 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr04:3600225-3601372 | ||||||||
| Gene Symbol | RLCK132, OsRLCK132 | ||||||||||
| DNA seq | ATGAAGAGATTTTTTACCACCGCCTTGCTGCTGCAGAGGTGCCAAGTTGGGAACAGAATAGAAGAGAGAAAATAATAGCTGTTGTTGTTGGTGCATCTGTTTCTGCTTTCAGTTTCTTGGCCTTCCTCCTGCTATTGATGATTTGGAGCAAAAGGAGGTCACGTGATTATCAAATTAATAAAATTAAAGAAGGTGCTTGGGATTGTCGCTTTTAGGTATGATCATTTGCAGTGTGCAACCAAAAATTTCTCCGAGAAGCTAGGTGGAGGAGGTTTTGGTTCTATATTCAAAGGAATTCTGAGCGACTCAAATACTATAGCAGTGAAGATGCTTGATGGTGCACGCCAAGGGGAGAAACAGTTCAGGGCTGAGGTCGTACAATTGGAATGATCCAACATGTGAATTTAGTTAAACTAATTGGCTTCTGTTGTGAAGGTGATATAAGGATGCTTGTTTATGAACATATGGTAAATCGGTCTCTTGATGCTCATTTGTTCCACAACGATGGGACAATTCTGAATTGGAGTACAAGGTACCAGATAGCCGTAGGGGTTGCTAAAGGATTGTCCTACTTGCATGAGAGTTGCCATGATTGTATCATACACTGTGATATTAAGCCAGAAAATATACTTCTTGATGTGTCGTTTGTTCCTAAGGTTGCAGACTTTGGAATGGCAAAACTGCTAGGAAGGGACTTCAGTCGAGTTCTAACAACAATGAGGGGAACCGTAGGATATCTTGTACCTGAATGGATTAGTGGAGTAGCAATTACACAAAAGGTTGATGTCTATAGCTATGGAATGGTTACTGTTGGAAATCATATCAAAGAATGTAAAAGCAGTGCTGATCAGACTGTTTATTTTCCTGTGCAAGCTGCGCGTAATCTTCTAAAGGGAGATGTGGGGAGTTTGGTCGATCACCAATTACAAAGTGATATCAACATGGAGGAGGTTGAAAGAGCTTGCAAGGTTGCGTGTTGGTGCATTCAAGATGAAGACTTTAATCGACCGACAATGGGTGACGTGGTTCAGGTGCTAGAGGGTCTAGTAGAACCTGACATGCCCCAAGTGACAAGATTACTTGAAAGTATTTTGGGTGACGTGCAAGAGTTCAAATTTGACCAGATCAGTGGTATTTCAACAGAATAA
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| CDS seq | ATGAAGAGATTTTTTACCACCGCCTTGCTGCTGCAGAGTTTCTTGGCCTTCCTCCTGCTATTGATGATTTGGAGCAAAAGGAGGTCACGTGATTATCAAATTAATAAAATTAAAGAAGGTGATATAAGGATGCTTGTTTATGAACATATGGTAAATCGGTCTCTTGATGCTCATTTGTTCCACAACGATGGGACAATTCTGAATTGGAGTACAAGGTACCAGATAGCCGTAGGGGTTGCTAAAGGATTGTCCTACTTGCATGAGAGTTGCCATGATTGTATCATACACTGTGATATTAAGCCAGAAAATATACTTCTTGATGTGTCGTTTGTTCCTAAGGTTGCAGACTTTGGAATGGCAAAACTGCTAGGAAGGGACTTCAGTCGAGTTCTAACAACAATGAGGGGAACCGTAGGATATCTTGTACCTGAATGGATTAGTGGAGTAGCAATTACACAAAAGGTTGATGTCTATAGCTATGGAATGGTTACTGTTGGAAATCATATCAAAGAATGTAAAAGCAGTGCTGATCAGACTGTTTATTTTCCTGTGCAAGCTGCGCGTAATCTTCTAAAGGGAGATGTGGGGAGTTTGGTCGATCACCAATTACAAAGTGATATCAACATGGAGGAGGTTGAAAGAGCTTGCAAGGTTGCGTGTTGGTGCATTCAAGATGAAGACTTTAATCGACCGACAATGGGTGACGTGGTTCAGGTGCTAGAGGGTCTAGTAGAACCTGACATGCCCCAAGTGACAAGATTACTTGAAAGTATTTTGGGTGACGTGCAAGAGTTCAAATTTGACCAGATCAGTGGTATTTCAACAGAATAA
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| Protein seq | MKRFFTTALLLQSFLAFLLLLMIWSKRRSRDYQINKIKEGDIRMLVYEHMVNRSLDAHLFHNDGTILNWSTRYQIAVGVAKGLSYLHESCHDCIIHCDIKPENILLDVSFVPKVADFGMAKLLGRDFSRVLTTMRGTVGYLVPEWISGVAITQKVDVYSYGMVTVGNHIKECKSSADQTVYFPVQAARNLLKGDVGSLVDHQLQSDINMEEVERACKVACWCIQDEDFNRPTMGDVVQVLEGLVEPDMPQVTRLLESILGDVQEFKFDQISGISTE |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [UniProtKB/Swiss-Prot:O64477] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_04g0002440 | OsIR64_04g0002440.01 | Chr04 | 3600225 | 3601372 | + | NAM | ||
| CDS seq | ATGAAGAGATTTTTTACCACCGCCTTGCTGCTGCAGAGTTTCTTGGCCTTCCTCCTGCTATTGATGATTTGGAGCAAAAGGAGGTCACGTGATTATCAAATTAATAAAATTAAAGAAGGTGATATAAGGATGCTTGTTTATGAACATATGGTAAATCGGTCTCTTGATGCTCATTTGTTCCACAACGATGGGACAATTCTGAATTGGAGTACAAGGTACCAGATAGCCGTAGGGGTTGCTAAAGGATTGTCCTACTTGCATGAGAGTTGCCATGATTGTATCATACACTGTGATATTAAGCCAGAAAATATACTTCTTGATGTGTCGTTTGTTCCTAAGGTTGCAGACTTTGGAATGGCAAAACTGCTAGGAAGGGACTTCAGTCGAGTTCTAACAACAATGAGGGGAACCGTAGGATATCTTGTACCTGAATGGATTAGTGGAGTAGCAATTACACAAAAGGTTGATGTCTATAGCTATGGAATGGTTACTGTTGGAAATCATATCAAAGAATGTAAAAGCAGTGCTGATCAGACTGTTTATTTTCCTGTGCAAGCTGCGCGTAATCTTCTAAAGGGAGATGTGGGGAGTTTGGTCGATCACCAATTACAAAGTGATATCAACATGGAGGAGGTTGAAAGAGCTTGCAAGGTTGCGTGTTGGTGCATTCAAGATGAAGACTTTAATCGACCGACAATGGGTGACGTGGTTCAGGTGCTAGAGGGTCTAGTAGAACCTGACATGCCCCAAGTGACAAGATTACTTGAAAGTATTTTGGGTGACGTGCAAGAGTTCAAATTTGACCAGATCAGTGGTATTTCAACAGAATAA
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| Protein seq | MKRFFTTALLLQSFLAFLLLLMIWSKRRSRDYQINKIKEGDIRMLVYEHMVNRSLDAHLFHNDGTILNWSTRYQIAVGVAKGLSYLHESCHDCIIHCDIKPENILLDVSFVPKVADFGMAKLLGRDFSRVLTTMRGTVGYLVPEWISGVAITQKVDVYSYGMVTVGNHIKECKSSADQTVYFPVQAARNLLKGDVGSLVDHQLQSDINMEEVERACKVACWCIQDEDFNRPTMGDVVQVLEGLVEPDMPQVTRLLESILGDVQEFKFDQISGISTE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0103500 | SBH | 1.882508 | 1.019407 | 1.186820 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0103500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001990 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0003370 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0000150 | SBH | 0.808031 | 5.019080 | 3.806088 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0002410 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0003040 | SBH | 2.125278 | 0.0 | 0.660680 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0102900 | SBH | 0.0147315 | 0.069685 | 0.0188165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0002220 | RBH | 0.0 | 0.036471 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0064800 | RBH | 0 | 0 | 0.0039505 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0000150 | SBH | 0.390810 | 0.135176 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0012690 | SBH | 0.953531 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0012700 | SBH | 3.485304 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0000140 | SBH | 1.239633 | 0.798403 | 0.959144 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0002240 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G002520 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0000120 | SBH | 0.342205 | 15.181497 | 3.611933 |
