Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_03g0003680 | OGI:03007220 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr03:2746440-2749828 | ||||||||
| Gene Symbol | RLCK100, OsRLCK100 | ||||||||||
| DNA seq | GCCCAACCCCCGCCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGCTCTCACTTTTCCAAACCATCAACGTGCCCTTCTCTTTCCTTCTTCCCTTCCTCCGAGGGCTTCTGATCCGGAGAGGGACAGAGATGATTGGGAGCAGAGGCGGCGGCGGTGGCGCGGCGCCGAGGCCGAGGCGGCGGAGCGACCCGGGCGACAGCCGCGACCTCTCCGTGGCCACCACCACGGAGTCGTACAACTCCGAGAGGTCCGTGGGGAGCGGCGGCGGCCGCGGGACCGCCTTCCTCGACGCCTTCCGGTCATGCTTCGTCTCCGGGGAGGCGCAGGCGCGCTCCCCGGAGACCTCGTCGTTGTCCGACGACTTCCATCCCTCACAACAGCGTAAGTCCCAAGAACAAATTAACACGTGAATCCATCCTCCTCCTCCTCTTCTTCTTATCCATAATTTCTCCGCAGCTTTTAGGGTGTTTTTTTTCCTTGAAAAAGTTTCAAATACGATACTTTTGTCGGCCAAACTAGTCCTTTTTTTGTGTGTGTTGAAGATAGTACTACTATCTTGTTCGTCAACGGCTTGCGGTCAACGCGTACGATAGTGTTTGTACGGCGCTGTAATTGGAGAGGATAATCTCATGATATATGCAGAAGTAATATTTGCTCACGTACTAATGGTAGAAAAAATATGTCCAGTGATGACAACATTTCGAGGTATTTTTCTTCGGTTGAACTCGTACGGTGTTTGAGCAAAAAAGGTTTGATTTCTTTTCCTTTTTAAATCCGAGGGTAGTTTGGTTGTATGCGTTTTGTGGCGTGTGTTCATCAGGATGGTGCCTACTCATCTGAGATCTCTTAGTTTAATCATACGTGTGTAACACTCTCGAACTGCTTCTTTATTGTTTTTTGATTTGTCTCCACTTGATCCTGGACCCATCTTGGTCAAAATTCACCTACCATATTCCATACTATAAGCGAACCTATCTATAAGCTATCATTTCTTGATCCCTCTCTGATCAAAGCAGAATTTCAAGCTCTGTAAATTAACATGGATGATCATGCAATCTCCATGCAAAGTATTGCTCTGAACAATAAATATTTCAGTAGCTCATGCCAGAGTTATGATGCTCATATTAATTAATTAATTAATTAATTAATTAATATAGGTGTCGTTGAATTCATTAAAAAATGTGGATGCGAATTTTTGTTTTCACCCTTTTCACTGCAAGAATTATCATCGTTATGTTTTTTCCCCACCTGGTTCAGATACTTATTTCTGTTAATTGTTAAATCATCAGTATCACAGTCGATAAGCTCACAAGGTTCTAGCAGTGGAAGCAATTTTGAGATGCGGAGATCAATGAAAGGACTGTATAATCCAATGCATAGAAATTCTTCAGGAAAGGAGATACCTGGAAGCACACAGTTCTCCTTACCACAGATCCAGAAAGCAACCAAAAATTTCTCGCCAAACCTGAAGATTGGGCAGGGCGGTTCCGGGACAGTATACAAAGGTCAGCTTAATGACGGCACTCTTATCGCCGTCAAACGGGCCAAGAAGGTTTGCTCTTATTTCTTAATGTTCATTTTGCAGACTGCATTAGCTATTGAATACTGATTACCTTGGTCGCCTTTCTTTGCAGAATGTGTACGACAAGCATATGGGTCGTGAGTTCCGGAACGAGATTGAGACGTTGCAATGTATCGAGCACCTTAATTTGGTAAGGTTTCATGGGTACCTGGAGTTTGGTGGTGAGCAGTTAATCATTGTTGAGTATGTTCCCAATGGAAATCTTCGTGAACACCTTGATTGTAAGAATCCCATGATCCTGGAAATCCCCCCTTTGTGAGAATATAAATCAAGGGTTAATGCTAATTGTATCTTACATGAAGTTAGCCATATGCAGGTGTCAATGGAAAAATTCTTGAATTTTCTCTAAGATTGGATATTTCAATCGATGTGGCTCACGCTGTTACATATCTTCACACCTACTCAGGTATATCTAGTTCTTCTGTAGTTCTATGTGATTTTTTTCTTCAGCAAATTGTATATTTGAAACCTACTGATTGGTGAATCTAGAGAAGATAACCGATAGTTACAGTTGAAATGTTCATGTCCCTAAAAGGAACAAACATTTAGGTAACATGGTGTCCTTAGCTGCTTCTAATATTCTTGATCTGCGTATCCATTTTCGTTTATTCCATCAATTAATTCTCTATGTGAGTAGTAGTTGTTAGTAGCCTGCCTAGATGCCATGCGGAGCTGATCTGCGGATTCCAGAGTAAATGTATGGCATAGCTATACTTCCATTGGAAAAATGCGTCTTTTTATGTAAAAATTGTCCTTGGTTACATGTTCAAACAACCACTTTGCTCACTATCAACTCATCAAGTAGCAACTAAATTCTAACCCTTACAATTTTACCTACAATGCAGATCACCCAGTCATCCACAGGGACATCAAATCGTCAAACATTCTTCTCACAAACAACTGTAGGGCAAAGGTTGCTGACTTTGGATTTGCCAAACTAGCTCCAACTGATGCTAGCCATGTCTCAACCCAAGTAAAAGGAACAGCAGGCTATCTTGATCCTGAATATCTCAGAACATACCAGCTCAATGAGAAGAGTGATGTCTACTCCTTTGGAGTTCTTCTGGTGGAGTTGATAACAGGGAGGCGCCCGATAGAACCAAGGAGAGCTATCGTCGAGCGTGTTACTGCAAAATGGGTTAGTTTTTGTGCTATTCTAATCCTTACCATTGCATCTCAAATCTTCTCCATTACCCAATGAAACATATAGCAAATTTTATACAGGCAATGGAAAAATTTGTTGAGGGAAATGCAATACAAACGCTGGATCCAAATCTAGAAGCAACTGATGCGATCAACCTGGCCGTCGAGAAAACGTACGAGCTGGCTCTGCAGTGCTTAGCTACAACTAAGAGGAACAGGCCAAGCATGAGGCGATGCGCTGAGATCCTATGGAGCATACGCAAAGATTTCAGGGAGTTGGATATACCAACCGCATCCCTGAACTGAACTGAGACAGTTCACTTGGAGCAATCAAGAAAAGCTGCACTCCAGTTTGCCTCTCTTCAAAGCGTGGTGGTATGAATCACCCGATTGCTGGATGATGAATTTATTCCTTCAGGATGTGGTCTAAGTAGTTGTGATTGTGAACGGGACTGGTGATCTTCCTAGGAATTGTGTGTTCACCAGCTAGCAACTAGGAACAATTGCATAGCATATTCTGTACATGATAAATTGTTGCTGTGAGCAAGACAGACACAGATACTATATAATGGTATATTGGTTGAGGATGCAATTTTGTTGTGATTATTTAAAACTTCCAAAAGAACACACAAAGTTATATACAAAATCGTAAC
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| CDS seq | ATGATTGGGAGCAGAGGCGGCGGCGGTGGCGCGGCGCCGAGGCCGAGGCGGCGGAGCGACCCGGGCGACAGCCGCGACCTCTCCGTGGCCACCACCACGGAGTCGTACAACTCCGAGAGGTCCGTGGGGAGCGGCGGCGGCCGCGGGACCGCCTTCCTCGACGCCTTCCGGTCATGCTTCGTCTCCGGGGAGGCGCAGGCGCGCTCCCCGGAGACCTCGTCGTTGTCCGACGACTTCCATCCCTCACAACAGCTATCACAGTCGATAAGCTCACAAGGTTCTAGCAGTGGAAGCAATTTTGAGATGCGGAGATCAATGAAAGGACTGTATAATCCAATGCATAGAAATTCTTCAGGAAAGGAGATACCTGGAAGCACACAGTTCTCCTTACCACAGATCCAGAAAGCAACCAAAAATTTCTCGCCAAACCTGAAGATTGGGCAGGGCGGTTCCGGGACAGTATACAAAGGTCAGCTTAATGACGGCACTCTTATCGCCGTCAAACGGGCCAAGAAGAATGTGTACGACAAGCATATGGGTCGTGAGTTCCGGAACGAGATTGAGACGTTGCAATGTATCGAGCACCTTAATTTGGTAAGGTTTCATGGGTACCTGGAGTTTGGTGGTGAGCAGTTAATCATTGTTGAGTATGTTCCCAATGGAAATCTTCGTGAACACCTTGATTGTGTCAATGGAAAAATTCTTGAATTTTCTCTAAGATTGGATATTTCAATCGATGTGGCTCACGCTGTTACATATCTTCACACCTACTCAGATCACCCAGTCATCCACAGGGACATCAAATCGTCAAACATTCTTCTCACAAACAACTGTAGGGCAAAGGTTGCTGACTTTGGATTTGCCAAACTAGCTCCAACTGATGCTAGCCATGTCTCAACCCAAGTAAAAGGAACAGCAGGCTATCTTGATCCTGAATATCTCAGAACATACCAGCTCAATGAGAAGAGTGATGTCTACTCCTTTGGAGTTCTTCTGGTGGAGTTGATAACAGGGAGGCGCCCGATAGAACCAAGGAGAGCTATCGTCGAGCGTGTTACTGCAAAATGGGCAATGGAAAAATTTGTTGAGGGAAATGCAATACAAACGCTGGATCCAAATCTAGAAGCAACTGATGCGATCAACCTGGCCGTCGAGAAAACGTACGAGCTGGCTCTGCAGTGCTTAGCTACAACTAAGAGGAACAGGCCAAGCATGAGGCGATGCGCTGAGATCCTATGGAGCATACGCAAAGATTTCAGGGAGTTGGATATACCAACCGCATCCCTGAACTGA
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| Protein seq | MIGSRGGGGGAAPRPRRRSDPGDSRDLSVATTTESYNSERSVGSGGGRGTAFLDAFRSCFVSGEAQARSPETSSLSDDFHPSQQLSQSISSQGSSSGSNFEMRRSMKGLYNPMHRNSSGKEIPGSTQFSLPQIQKATKNFSPNLKIGQGGSGTVYKGQLNDGTLIAVKRAKKNVYDKHMGREFRNEIETLQCIEHLNLVRFHGYLEFGGEQLIIVEYVPNGNLREHLDCVNGKILEFSLRLDISIDVAHAVTYLHTYSDHPVIHRDIKSSNILLTNNCRAKVADFGFAKLAPTDASHVSTQVKGTAGYLDPEYLRTYQLNEKSDVYSFGVLLVELITGRRPIEPRRAIVERVTAKWAMEKFVEGNAIQTLDPNLEATDAINLAVEKTYELALQCLATTKRNRPSMRRCAEILWSIRKDFRELDIPTASLN |
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| Function | Calmodulin-binding receptor-like cytoplasmic kinase 2 [UniProtKB/Swiss-Prot:Q8VZJ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_03g0003680 | OsIR64_03g0003680.01 | Chr03 | 2746440 | 2749828 | + | NAM | ||
| CDS seq | ATGATTGGGAGCAGAGGCGGCGGCGGTGGCGCGGCGCCGAGGCCGAGGCGGCGGAGCGACCCGGGCGACAGCCGCGACCTCTCCGTGGCCACCACCACGGAGTCGTACAACTCCGAGAGGTCCGTGGGGAGCGGCGGCGGCCGCGGGACCGCCTTCCTCGACGCCTTCCGGTCATGCTTCGTCTCCGGGGAGGCGCAGGCGCGCTCCCCGGAGACCTCGTCGTTGTCCGACGACTTCCATCCCTCACAACAGCTATCACAGTCGATAAGCTCACAAGGTTCTAGCAGTGGAAGCAATTTTGAGATGCGGAGATCAATGAAAGGACTGTATAATCCAATGCATAGAAATTCTTCAGGAAAGGAGATACCTGGAAGCACACAGTTCTCCTTACCACAGATCCAGAAAGCAACCAAAAATTTCTCGCCAAACCTGAAGATTGGGCAGGGCGGTTCCGGGACAGTATACAAAGGTCAGCTTAATGACGGCACTCTTATCGCCGTCAAACGGGCCAAGAAGAATGTGTACGACAAGCATATGGGTCGTGAGTTCCGGAACGAGATTGAGACGTTGCAATGTATCGAGCACCTTAATTTGGTAAGGTTTCATGGGTACCTGGAGTTTGGTGGTGAGCAGTTAATCATTGTTGAGTATGTTCCCAATGGAAATCTTCGTGAACACCTTGATTGTGTCAATGGAAAAATTCTTGAATTTTCTCTAAGATTGGATATTTCAATCGATGTGGCTCACGCTGTTACATATCTTCACACCTACTCAGATCACCCAGTCATCCACAGGGACATCAAATCGTCAAACATTCTTCTCACAAACAACTGTAGGGCAAAGGTTGCTGACTTTGGATTTGCCAAACTAGCTCCAACTGATGCTAGCCATGTCTCAACCCAAGTAAAAGGAACAGCAGGCTATCTTGATCCTGAATATCTCAGAACATACCAGCTCAATGAGAAGAGTGATGTCTACTCCTTTGGAGTTCTTCTGGTGGAGTTGATAACAGGGAGGCGCCCGATAGAACCAAGGAGAGCTATCGTCGAGCGTGTTACTGCAAAATGGGCAATGGAAAAATTTGTTGAGGGAAATGCAATACAAACGCTGGATCCAAATCTAGAAGCAACTGATGCGATCAACCTGGCCGTCGAGAAAACGTACGAGCTGGCTCTGCAGTGCTTAGCTACAACTAAGAGGAACAGGCCAAGCATGAGGCGATGCGCTGAGATCCTATGGAGCATACGCAAAGATTTCAGGGAGTTGGATATACCAACCGCATCCCTGAACTGA
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| Protein seq | MIGSRGGGGGAAPRPRRRSDPGDSRDLSVATTTESYNSERSVGSGGGRGTAFLDAFRSCFVSGEAQARSPETSSLSDDFHPSQQLSQSISSQGSSSGSNFEMRRSMKGLYNPMHRNSSGKEIPGSTQFSLPQIQKATKNFSPNLKIGQGGSGTVYKGQLNDGTLIAVKRAKKNVYDKHMGREFRNEIETLQCIEHLNLVRFHGYLEFGGEQLIIVEYVPNGNLREHLDCVNGKILEFSLRLDISIDVAHAVTYLHTYSDHPVIHRDIKSSNILLTNNCRAKVADFGFAKLAPTDASHVSTQVKGTAGYLDPEYLRTYQLNEKSDVYSFGVLLVELITGRRPIEPRRAIVERVTAKWAMEKFVEGNAIQTLDPNLEATDAINLAVEKTYELALQCLATTKRNRPSMRRCAEILWSIRKDFRELDIPTASLN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.419433 | 0.432298 | 0.138555 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0148700 | RBH | 1.752524 | 1.538305 | 1.038973 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g05470 | RBH | 0.623241 | 1.014616 | 0.262277 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0148700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0003790 | RBH | 0.794509 | 7.923937 | 0.869929 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0003710 | RBH | 0.218511 | 1.437490 | 0.545078 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0003750 | RBH | 1.937923 | 8.913705 | 1.119246 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0003690 | RBH | 0.082539 | 0.247853 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0003790 | RBH | 1.203275 | 3.888621 | 3.780069 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0043500 | RBH | 3.82478 | 10.745201 | 4.8385055 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0038270 | RBH | 0.060171 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0043800 | RBH | 4.406625 | 29.381708 | 0.9203065 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0003790 | RBH | 0.072080 | 0.070714 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0003760 | RBH | 0.0 | 5.066021 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0003730 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0003790 | RBH | 0.575119 | 0.230788 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0003770 | RBH | 0.043098 | 7.437175 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G003740 | RBH | 1.072612 | 2.744936 | 0.128454 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0003600 | RBH | 1.863938 | 22.272207 | 2.130201 |
