Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsIR64_02g0037660 OGI:02098130 | 16/16 IR 64 | OsIR64RS1 | Gramene(+IsoSeq) Chr02:36044426-36052143
Gene Symbol -
DNA seq

GGGGGAAATGATATGGTTTTGTATGCAGCATTTACATGTAAATGAGTGGTGTCTTTAGTCTGGAACTTCTAAAAAGGTACTCGTGCTATGTTACAAGTGTACACCATCGAGAGATGGATAAGCTAACCATGCCTGGCACTGACTTATTGTGAGTTTGTTCCTGAACTACAACTACAATCTGACACTGGTTACACTACAGCATAGTCATACTTTTTCACAAAAAAGCAGCAGCTTTGGATCTCCCTGAACGAAAACTTGTGTACCGAAGGAACAGCAACGCAGTTTCAGATCAAGTGGACAGCTCATACTCCCAGTATTTGGGATATGAATATGATTCTCATCTTCTACAGCCAATGAGCAAATCATGTCTGAATAAAATTGGCCCTGATTCTCACTTCCTGCAGCCAATGATTCAGCATAAGGCGTCTCTTCTGAAATTTCCAGATTATGCATTCATTTCTCAGGTTTTTGCTCTGCTGAATCAGCATCTCCTGTTTGTCCCTCGCACGTTTCCCTGTTATCCAAAACCTGAGTGGGTGCATCTAGAGATCTTGGTAATGCTCCCAGTTGTCTTAGGCTCTCGCTCTGCTTCTCGATTATCATGGCGAGGTACTTGCTGTGTTCTTCTACTTGCAGCTGCAGCTTTCTTTGGATCTGTGGAGAGGAAAATACAAGGGACCCTATACATTAGTCAAACGCACAAAATCTGGCGTGTTCATTCCCTTTTGCAGTTCAAAACAAAAATCAAGTATCTTATTATTGAAAGAATAAGGGCACCTCAAGTTGTTCGTGAAGTTGTTTCTGCAAGCCAATCTGGACCCTTAATCCTTCACAGGTGGTTTCCATGCCTCTGTAGTAGGTACACAGTCAAGACTTTAGAAAACACTGGCACACGACATATATTTGAACTTAAATTCATCCACAGATAAGTTAGGAAGAAAATGCAAATTCATCCAGGTCGGAGCATAGATGTGATATTATGCTCCACTACTCATCTAGGCCAACACATGATATTTATAAAATTTCTAGGACTCAGAGATATATATCACATAAAAATCATCTCACTTCAAGGGCTGAGAAGAAACTTCATCCGTTTGGCCACTTTTCGCAGATTCACCTATGAGAAAGAAATAAAGAAAATTGTGTAAAGCTCCAGATCGTTCAAATTTACTTCAAATTTAAATAGGCACAGCGCATGATAAAATTCAGTCTCTTAAAGATCAATATATAAACTCTAATAGCATCAACAACATAGTACGGTCACTGCAACATTCTAATTTAGTACAATGACCGGCATAGTGCACCACGTATCTTGTTATGGTGAAATTAAACCAAAATTGAAACATCGAAACACACCGACCATCAGATAGTTGAGGTCGATGATGAACTGTGCGATACTTCTGCACAAGAATAACCCATGGCCATCAGGAAAAATCAAGAAGAGTCGTATAAAAAGCATTGAAAATTCAGAAGCAACAAATGCAGACCTGTAGATGGCTTTTTACATGGTATATAGTTAAGCCGTCAACCTTCATAACTTTCTGGACAGCTTTTGGAGTTGCTTCTGCAAGAGAAAAGTAAACAGAAATGAAAATAGATCTAGGAAAACAGAGACTTGTACTTGTTTCTTCTTGTGAAAACAGCACTGTTCCGTAAAAGTTCAAGATGAAAATATGATAAGAAAAACAGAGGATCAGGGACCAACTTTCACTTCCACCAAGCTTGTTAACAGCATCAACAAACCGCTCATGGAGCTCAGGTGTCCATCGCATCCTTGGTTTGGTTGCAGCAATGTTTGAAGAAGCGATATTACCAGAACAAATTTCATTGAAGTTGGGAGGATTTGATGTATTTCTCTGTGCATGACAATGCAAATAATTTGAAGGTGTTGTACTTGTCGCATCAACAGCCTGGAAATGAGGGGAAATGTTATCTAAAATTTTAAGTAGACCAATGAAGAGCTGGTCTAAATTGCCGTACAGGCTGTGAGAGAGGATAAGAAATCATGAAATAGTTAGTGCACCATCCAAAAGGGTCAAATCAGATACCTTCAGCACAGAACCAGCAGACACCGAACTTTCCAAATACTGCAAGGAAGTGCCAGATGAGAACCACTCATTTTGCTTTGCAAGGTTGGTGCTAGGACTTGCTGCAATGTTATCTTGTATTTGTTGGTCAAAAATAGTCATATCTTGTTGATCGAAGAAATCAACACTAGTTGGACAAACAAATGGTCCAGGCAGTGGTTCTTGACTCCAACTATTCTGTTCAGATACTTTAGGATAAACCATCCTTAAAGAACTTGGATTACCCTTGTATAATGACTGTGTTGGCGGCAAGGAAGAATCACATCCAGAGGTATCAATAGCATATGATTCAGAAGAAAGCTTGCCGTTAGGTGATTCACTTTTGTTGATATAAAGATCTGATGTAAAGTTGGAAGCTAACATACACATTGGAGTAGAAGCATCAAATGAGTTGATAGAACTACCACACTGCTCCCTTTCGATATAGGATGGTCTATGCTCTGAAAAACTAGGAAATGTAACTTCAGAGAGTTCTGGTACTACAGTTATAGCTGGCGAAAGATATTGGGGAACTTTTCCATTGCGAAGCTGATTCATAGTTGATGTAGGCCTGTTTCATGTACCCCTAAGATGATTCGCTTCAATCTGTTAAAGTGGAGCTCTGGTCATATCATCAGCCAAATGCAGAAGTCTATTACATCAAACTTGAAAACGAAATAAGTTTTCCCTGGTCTTGTTCAGATATTAAAAGTGTTTTTTTTCCACATAGAGCAAAGATTTGTCTTACAACAATTCGTAACCCAACAGCTAGATATATTTCTATGACTCCCAAATAGTGATTTGGTGAGCACTTAGAAGGGTGAACATCAAGTATGCTGCTATACATCTTAGCAAAGAAAATTGTAATTGGACCAAAATATACTGATGTGAAGAGTGAATAGAGGGTAAAGAGAAGTATATTTGAAGAAGCAAAAAAAAAGAGGGGCGGGGAGGGGCACGATTGAGGCATGAATGGAACATAATTTTGCAGAATTAAACCACTGCTCAAACAGAAACAAAGAAAATGAATGCATTAAAGACTTGAATAGAACAAGTCCCGCCTATTACAGTGATTCCCAAAGAAACACACTGAAGGATAGAAGGAAACATAACAACAAAAAAGAAAATCTTAGAGAGAAATCAGACAAAAGATTACAGAAATGAGTAATTTGATTTGAATTCTGTGTTGCTAAATCTAAATGGTTAATTGAACTTTGTGAAGCTACTTACCAGCCTATTCCCAGAATGAAATGAAAGATGAAACAAAGGTCTGAAACTAAGAGTCTATGATCCTCTTGGGGGCTAAGAAGTTTAGTTTGTTGTGTGTATCTTGGTGGGTGGGGTTATGGTTCTAGAGAAGTACTTAATCTGCTAAAGTATCCAATTTTTTTATAACCACTAAACGTAATGATCTGTTACTACTTAAAAATTATCTCCATTTTATTTTGTAAATGGGACCACAAGGACCACTCCTCTGTAATGTAAATATTAAACCTACCAGCTATTACATGCACCAACCATCCCCAGAAGCAACCAATGCCAGATTCCTTCAGTTTTTACAAGCTTTGAAAGTATCAAAAGAGATATAAATGCTAGATTAGTAGCACAGTGCACGGACCTATGGCCTCAGATATGTTCACTTCTGCTTGCATGGTCCAACCAAAACATGTATTTCGTAAACCGAACTATAAGGTTGATTAGTTATAGAGCTGTAATAAAAATTCCAATACAGTGAACTCTTCGCTAGCAGTATCTGCACATGGTACCTCTACCTTGACAAGGCTTTTATTCTTGGTGAACTAACTGTGTGGATGAAGCAATAATCATAAAAGAATCCAAATAACAAGCTTGCAATCTAGGAGTATTTTTATGGCTACTAGGCGCCTTGGAGTTGACAAACTCAATTTGGCATGTAACGGAAGCTTTCATTGAAAAGCTGGCCTGGCAACGTCTTGTTCTAAATTAATAATTATGTTTGCCATCATCCAAACCTATAAATAAAGAATAGCAGGAATAGAAAACTGGAAGTTTGCACAAAATTCTATTAATTGAGTTTTGGAGTTCTGATCTGGTGCAGGTGGAATCCAGAAGCACTAAGAGGGAAAAAAAAGAATTGACCAAAAAAAAGTCAATCAAAGCATTGTTTGGATTCCAGCAAGTTATCATAGGAAAAAAGAAAACTCTGGTTGATGCCTTATCCTGCTGTTGTTGGTCTCCCTTGGATTATAGATGCTTTACAACTTTAGTAGGGCTACAATAGAAAGAGAGAGATGGGATGAAAACCCAAATAGGGAGGAAGCTAATGCCTTAAGCTTATTGTCAGTAAAACCACAACTGTTGAACAAGTCACTCATAAGGTTTCAGTTTCATTGTTCAGAAAACAAACAAAAAGGAGGACAAATATGGCACTGATAGATCACCAAAAATCAACATGGCCTGGACAGGAAGCAATCTGATGGGTGTATTCATCATAGCTTCTCAACTTAAAAGGCAAACAGAGAAGAGGCAAAATCTATTCAATATCCAGTTTGACAATCTGCATGAACTGTCAGTCAATGTGTCATCTGGCTAAATTTTCCATCACGCAAAAATGTATATCATACATGGAAATAACTACAGCGGTCAGTTTGGAAAATAAATTACTCTGAAATATCAGTGCATACTGCAAATCTCCTGCACTGTCTTGAACTGTGGCCCATGGCTACTGCCACTACTGAATTGTCAGTTGAGTTCTTTGAACATGGAATGTGTAGAGACATTGAATCCTTTCAGAAATCTCACCTAGAATGAAAAAAAAATAAGCATGCTTGGAAACATACGAGCAATTTGAAGTTTGAGAAAGAGGGTAGTTTTAAGTTATGGCTATCAAATAACTTACAGTTCTTTCATTAAAAAAAACACAAATTTACTTACAGTTTTGATGCTGGTCTATTCCATCTCCTCCGCAATTGCATTTTCTGTGAAATGAAGGATAAGAGCTGATATCACAATTTGCAAATGTAACATAGCCTGCATAGACTCAGCTGTTGGTAACATACCGGTCTTTGGAAGCAGCTTCACCGAGTTGCTTATCTATTTCAACAAGGTATATCTTAAACAAGCTTGACCTATAGGATCCATTACAGGCTAAATTACCATAATAATGATGCCACAGAACAGGCCATAGCATAAGGTGAAAAGCAAGCAGCTCACCGTGGCGGCATTGCTGCAGCAGTAAGAACTGGAGGTAGAAGCCATAATATGTACGGTTCGCTCTCTAATGATTGCCTTGCATACTCACAAATATCCATCTCCTATTGGAGTTCAAAGGTTCAGTTAAAATATTACTTTCTTTAAAGAACAGCGATTAACAGCTTTGAGAAATAAAGAACTTAAACAATTCTTGCCCACTGAAAAAATAAGAGGTAAATAATGACCACACATGAAAGGACTTGATCTGGCCAACATTATGCCCGCTAAATATTTTTTTTGTTTCCTCAGGTATCTCAGAAAGGCTGCTTGATCGTAACCAACAAAACCAATAGGCAATTGCTAACTTCTAAAAGTAGTTTTTCACAATTATTGCAACATCAGAGTAGTGCCCTCAATAATTGACATAATGACGCTTTGATAGTACTGACAGTTCAAGTGTACTACCACCGTTCCAAAATATAAGCATTTCTAGGATTCATATCCTGTACCACAACACAAGCATGTCTACCACCATTTACACTACTTGTCCCATCAATCACTTTCCGTTCAAATTTCTTTCCGTTCTACCCTCAACCACTATCCCTCCTTTATTGAGGGGCACCAAAGTCTTTTCTCCTCAACCTTAATCTCTACTAAAAAAAACTAGAAATGCATATATTTTGGAACAGGGGAAGTAGCTTTTAGAAGCTGCTCCCAAGTTTGTATAGGTATTCGTTTGGTTTGCATGGTCATGATCACTTCATTTCAAAAGGTTCCCGCAGAAAGTAATGTTCCCAACAGATGGAAGAATCAACAAAATCCATCAACAAGACATAAAATAAAAATAAAAAGACCTTGAAACCAAGAAGCTTGTCTTGGCATTCATCCTGAGTTGTTCCTTGAAGCAACTGGTGCAGATCAGCATATTGTTTTGATATAGGAAAGGAACTAAAAGTATGTGACATGATGCTCTCTATTAATGAGTTCCATTGCCTTGCAACCAATCCCAACAAGCATAGCTCCTATAATGCAACACAACATATTGGTATTATAACATAGATAATGAAAGTACTGACAGAGTCTACGAGCAAAGACTAATACATACCATGACTTCAATGATGCCACTTTGACTAGAATCTGCAGAAACTTTTAATGGTTCAAACAATCCCATCCACTGCTCCTTGGGAGCATTAAAGATCATATTAGTTCCTGACATGATCCGAATGGTACGCTCATCAAGCAAGTACGACAAACACTTTGCTTTCCATTGCTTCCACAGGATAAACTTGTCGATGATTTGTGTTTTCCTGTGTTAATAATAGTTTTGAGTGAGTTCAAACTGGAGCCTGCTATGGTCTCAAAAAAAGGACACAGATATATATGGATTAACAATTGTAACAATATAGAAATTTGGGGGATTAAGGGATTACATACTGAGCAGTTGCTGAGGTGCACAATGTACTTCCTGCACTATCAAAGCTGTCCTTTTTCATGCTTTTTAGAAGTGTGTTCAGTTCTCTCTCAGCCAAAGAAATACACGATCCTGAATCCAGCTTCTTCTGTAGTTCTTTAAGTAGAATCTGTGAATTACCCGTAAACAAGGATTCTTCACAAAATTCATCAGAGCTAGTGGAATGTCCAACATCACGGGCATTCTTGGTTCGCATCAAACTAGGTAAATTCATATCTAAAATCGATTGCACATACTCTTGGCACACATTGCATTCACCACTAGCAGAAATGCCATCCATATCCATCTCAACAACTGCTTGAAGTACAGCACCTAAATTCTCCGCATTCGTTGTTTTCAGAAAATGCTTCACAACCAACTCTCTTGCCATCGCAAGTGTTTTTGATCGGATATCCTCAATACCCTGCATGACACAGGGTAGAACATCACTACATGCAAAATCAGAATGGATGCAGCCAAGAAGCATCTTTTCAGAAGCACCTTGGGGAAATTCGGGCTTGAAGCGAGTTGAACGAGTGCAGCATCGAGCTCACTTGCAGACTCATCGTACTGACCATCGTCACGCAGGTTCTTGAAAACCTGAACACAATGCAGGAACATGTGTTAACATTTCAGTTCTTCACAACAACAGAAATTCTTCATGTGGTCAGTGTCTGTCCATTAAAGTAGGAAAACCCCCCTCCTAAGCAGCATTGAGAACGATGAACTTCCAATCTACACGGCCTTCCCCCGAGATGCTGAGAGAATCATGGCGTCGGAGGGGGCACGACGCAAACCTAAACCCCAGTGCAATTTCATCAACAGAGATCAACCATACCTCCTCGAAGAAGAGGGCCCATTGGAGGGCCTTCTTGACGTCACCGGAGCGCCAGGTGGCGGCGGCGCCAGACGAGGTGCGGCCGCCGGCGAGGACGAGGACGTCGACGAAGCCCCGCACCAAGCCGAGCAACTCCTCCATGGCCACCGTCTCGTGCGCCCACCCCATTTGCGATCCCCTTCCTCACAATTCC

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CDS seq

ATGGGGTGGGCGCACGAGACGGTGGCCATGGAGGAGTTGCTCGGCTTGGTGCGGGGCTTCGTCGACGTCCTCGTCCTCGCCGGCGGCCGCACCTCGTCTGGCGCCGCCGCCACCTGGCGCTCCGGTGACGTCAAGAAGGCCCTCCAATGGGCCCTCTTCTTCGAGGAGGTTTTCAAGAACCTGCGTGACGATGGTCAGTACGATGAGTCTGCAAGTGAGCTCGATGCTGCACTCGTTCAACTCGCTTCAAGCCCGAATTTCCCCAAGGGTATTGAGGATATCCGATCAAAAACACTTGCGATGGCAAGAGAGTTGGTTGTGAAGCATTTTCTGAAAACAACGAATGCGGAGAATTTAGGTGCTGTACTTCAAGCAGTTGTTGAGATGGATATGGATGGCATTTCTGCTAGTGGTGAATGCAATGTGTGCCAAGAGTATGTGCAATCGATTTTAGATATGAATTTACCTAGTTTGATGCGAACCAAGAATGCCCGTGATGTTGGACATTCCACTAGCTCTGATGAATTTTGTGAAGAATCCTTGTTTACGGGTAATTCACAGATTCTACTTAAAGAACTACAGAAGAAGCTGGATTCAGGATCGTGTATTTCTTTGGCTGAGAGAGAACTGAACACACTTCTAAAAAGCATGAAAAAGGACAGCTTTGATAGTGCAGGAAGTACATTGTGCACCTCAGCAACTGCTCAGAAAACACAAATCATCGACAAGTTTATCCTGTGGAAGCAATGGAAAGCAAAGTGTTTGTCGTACTTGCTTGATGAGCGTACCATTCGGATCATGTCAGGAACTAATATGATCTTTAATGCTCCCAAGGAGCAGTGGATGGGATTGTTTGAACCATTAAAAGTTTCTGCAGATTCTAGTCAAAGTGGCATCATTGAAGTCATGGAGCTATGCTTGTTGGGATTGGTTGCAAGGCAATGGAACTCATTAATAGAGAGCATCATGTCACATACTTTTAGTTCCTTTCCTATATCAAAACAATATGCTGATCTGCACCAGTTGCTTCAAGGAACAACTCAGGATGAATGCCAAGACAAGCTTCTTGGTTTCAAGGAGATGGATATTTGTGAGTATGCAAGGCAATCATTAGAGAGCGAACCGTACATATTATGGCTTCTACCTCCAGTTCTTACTGCTGCAGCAATGCCGCCACGGTCAAGCTTGTTTAAGATATACCTTGTTGAAATAGATAAGCAACTCGGTGAAGCTGCTTCCAAAGACCGGCCTACATCAACTATGAATCAGCTTCGCAATGGAAAAGTTCCCCAATATCTTTCGCCAGCTATAACTGTAGTACCAGAACTCTCTGAAGTTACATTTCCTAGTTTTTCAGAGCATAGACCATCCTATATCGAAAGGGAGCAGTGTGGTAGTTCTATCAACTCATTTGATGCTTCTACTCCAATGTGTATGTTAGCTTCCAACTTTACATCAGATCTTTATATCAACAAAAGTGAATCACCTAACGGCAAGCTTTCTTCTGAATCATATGCTATTGATACCTCTGGATGTGATTCTTCCTTGCCGCCAACACAGTCATTATACAAGGGTAATCCAAGTTCTTTAAGGATGGTTTATCCTAAAGTATCTGAACAGAATAGTTGGAGTCAAGAACCACTGCCTGGACCATTTGTTTGTCCAACTAGTGTTGATTTCTTCGATCAACAAGATATGACTATTTTTGACCAACAAATACAAGATAACATTGCAGCAAGTCCTAGCACCAACCTTGCAAAGCAAAATGAGTGGTTCTCATCTGGCACTTCCTTGCAGTATTTGGAAAGTTCGGTGTCTGCTGGTTCTGTGCTGAAGGCTGTTGATGCGACAAGTACAACACCTTCAAATTATTTGCATTGTCATGCACAGAGAAATACATCAAATCCTCCCAACTTCAATGAAATTTGTTCTGGTAATATCGCTTCTTCAAACATTGCTGCAACCAAACCAAGGATGCGATGGACACCTGAGCTCCATGAGCGGTTTGTTGATGCTGTTAACAAGCTTGGTGGAAGTGAAAAAGCAACTCCAAAAGCTGTCCAGAAAGTTATGAAGGTTGACGGCTTAACTATATACCATAAGTATCGCACAGTTCATCATCGACCTCAACTATCTGATGGTCGAGGCATGGAAACCACCTGTGAAGGATTAAGGGTCCAGATTGGCTTGCAGAAACAACTTCACGAACAACTTGAGATCCAAAGAAAGCTGCAGCTGCAAGTAGAAGAACACAGCAAGTACCTCGCCATGATAATCGAGAAGCAGAGCGAGAGCCTAAGACAACTGGGAGCATTACCAAGATCTCTAGATGCACCCACTCAGGTTTTGGATAACAGGGAAACGTGCGAGGGACAAACAGGAGATGCTGATTCAGCAGAGCAAAAACCTGAGAAATGA

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Protein seq

MGWAHETVAMEELLGLVRGFVDVLVLAGGRTSSGAAATWRSGDVKKALQWALFFEEVFKNLRDDGQYDESASELDAALVQLASSPNFPKGIEDIRSKTLAMARELVVKHFLKTTNAENLGAVLQAVVEMDMDGISASGECNVCQEYVQSILDMNLPSLMRTKNARDVGHSTSSDEFCEESLFTGNSQILLKELQKKLDSGSCISLAERELNTLLKSMKKDSFDSAGSTLCTSATAQKTQIIDKFILWKQWKAKCLSYLLDERTIRIMSGTNMIFNAPKEQWMGLFEPLKVSADSSQSGIIEVMELCLLGLVARQWNSLIESIMSHTFSSFPISKQYADLHQLLQGTTQDECQDKLLGFKEMDICEYARQSLESEPYILWLLPPVLTAAAMPPRSSLFKIYLVEIDKQLGEAASKDRPTSTMNQLRNGKVPQYLSPAITVVPELSEVTFPSFSEHRPSYIEREQCGSSINSFDASTPMCMLASNFTSDLYINKSESPNGKLSSESYAIDTSGCDSSLPPTQSLYKGNPSSLRMVYPKVSEQNSWSQEPLPGPFVCPTSVDFFDQQDMTIFDQQIQDNIAASPSTNLAKQNEWFSSGTSLQYLESSVSAGSVLKAVDATSTTPSNYLHCHAQRNTSNPPNFNEICSGNIASSNIAATKPRMRWTPELHERFVDAVNKLGGSEKATPKAVQKVMKVDGLTIYHKYRTVHHRPQLSDGRGMETTCEGLRVQIGLQKQLHEQLEIQRKLQLQVEEHSKYLAMIIEKQSESLRQLGALPRSLDAPTQVLDNRETCEGQTGDADSAEQKPEK

Function Protein PHOSPHATE STARVATION RESPONSE 1 [UniProtKB/Swiss-Prot:B8ANX9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsIR64_02g0037660 OsIR64_02g0037660.01 Chr02 36044722 36052143 - NAM
CDS seq

ATGCTTCTTGGCTGCATCCATTCTGATTTTGCATGTAGTGATGTTCTACCCTGTGTCATGCAGGGTATTGAGGATATCCGATCAAAAACACTTGCGATGGCAAGAGAGTTGGTTGTGAAGCATTTTCTGAAAACAACGAATGCGGAGAATTTAGGTGCTGTACTTCAAGCAGTTGTTGAGATGGATATGGATGGCATTTCTGCTAGTGGTGAATGCAATGTGTGCCAAGAGTATGTGCAATCGATTTTAGATATGAATTTACCTAGTTTGATGCGAACCAAGAATGCCCGTGATGTTGGACATTCCACTAGCTCTGATGAATTTTGTGAAGAATCCTTGTTTACGGGTAATTCACAGATTCTACTTAAAGAACTACAGAAGAAGCTGGATTCAGGATCGTGTATTTCTTTGGCTGAGAGAGAACTGAACACACTTCTAAAAAGCATGAAAAAGGACAGCTTTGATAGTGCAGGAAGTACATTGTGCACCTCAGCAACTGCTCAGAAAACACAAATCATCGACAAGTTTATCCTGTGGAAGCAATGGAAAGCAAAGTGTTTGTCGTACTTGCTTGATGAGCGTACCATTCGGATCATGTCAGGAACTAATATGATCTTTAATGCTCCCAAGGAGCAGTGGATGGGATTGTTTGAACCATTAAAAGTTTCTGCAGATTCTAGTCAAAGTGGCATCATTGAAGTCATGGAGCTATGCTTGTTGGGATTGGTTGCAAGGCAATGGAACTCATTAATAGAGAGCATCATGTCACATACTTTTAGTTCCTTTCCTATATCAAAACAATATGCTGATCTGCACCAGTTGCTTCAAGGAACAACTCAGGATGAATGCCAAGACAAGCTTCTTGGTTTCAAGGAGATGGATATTTGTGAGTATGCAAGGCAATCATTAGAGAGCGAACCGTACATATTATGGCTTCTACCTCCAGTTCTTACTGCTGCAGCAATGCCGCCACGGTCAAGCTTGTTTAAGATATACCTTGTTGAAATAGATAAGCAACTCGGTGAAGCTGCTTCCAAAGACCGGCCTACATCAACTATGAATCAGCTTCGCAATGGAAAAGTTCCCCAATATCTTTCGCCAGCTATAACTGTAGTACCAGAACTCTCTGAAGTTACATTTCCTAGTTTTTCAGAGCATAGACCATCCTATATCGAAAGGGAGCAGTGTGGTAGTTCTATCAACTCATTTGATGCTTCTACTCCAATGTGTATGTTAGCTTCCAACTTTACATCAGATCTTTATATCAACAAAAGTGAATCACCTAACGGCAAGCTTTCTTCTGAATCATATGCTATTGATACCTCTGGATGTGATTCTTCCTTGCCGCCAACACAGTCATTATACAAGGGTAATCCAAGTTCTTTAAGGATGGTTTATCCTAAAGTATCTGAACAGAATAGTTGGAGTCAAGAACCACTGCCTGGACCATTTGTTTGTCCAACTAGTGTTGATTTCTTCGATCAACAAGATATGACTATTTTTGACCAACAAATACAAGATAACATTGCAGCAAGTCCTAGCACCAACCTTGCAAAGCAAAATGAGTGGTTCTCATCTGGCACTTCCTTGCAGTATTTGGAAAGTTCGGTGTCTGCTGGTTCTGTGCTGAAGGCTGTTGATGCGACAAGTACAACACCTTCAAATTATTTGCATTGTCATGCACAGAGAAATACATCAAATCCTCCCAACTTCAATGAAATTTGTTCTGGTAATATCGCTTCTTCAAACATTGCTGCAACCAAACCAAGGATGCGATGGACACCTGAGCTCCATGAGCGGTTTGTTGATGCTGTTAACAAGCTTGGTGGAAGTGAAAAAGCAACTCCAAAAGCTGTCCAGAAAGTTATGAAGGTTGACGGCTTAACTATATACCATAAGTATCGCACAGTTCATCATCGACCTCAACTATCTGATGGTCGAGGCATGGAAACCACCTGTGAAGGATTAAGGGTCCAGATTGGCTTGCAGAAACAACTTCACGAACAACTTGAGATCCAAAGAAAGCTGCAGCTGCAAGTAGAAGAACACAGCAAGTACCTCGCCATGATAATCGAGAAGCAGAGCGAGAGCCTAAGACAACTGGGAGCATTACCAAGATCTCTAGATGCACCCACTCAGGTTTTGGATAACAGGGAAACGTGCGAGGGACAAACAGGAGATGCTGATTCAGCAGAGCAAAAACCTGAGAAATGA

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Protein seq

MLLGCIHSDFACSDVLPCVMQGIEDIRSKTLAMARELVVKHFLKTTNAENLGAVLQAVVEMDMDGISASGECNVCQEYVQSILDMNLPSLMRTKNARDVGHSTSSDEFCEESLFTGNSQILLKELQKKLDSGSCISLAERELNTLLKSMKKDSFDSAGSTLCTSATAQKTQIIDKFILWKQWKAKCLSYLLDERTIRIMSGTNMIFNAPKEQWMGLFEPLKVSADSSQSGIIEVMELCLLGLVARQWNSLIESIMSHTFSSFPISKQYADLHQLLQGTTQDECQDKLLGFKEMDICEYARQSLESEPYILWLLPPVLTAAAMPPRSSLFKIYLVEIDKQLGEAASKDRPTSTMNQLRNGKVPQYLSPAITVVPELSEVTFPSFSEHRPSYIEREQCGSSINSFDASTPMCMLASNFTSDLYINKSESPNGKLSSESYAIDTSGCDSSLPPTQSLYKGNPSSLRMVYPKVSEQNSWSQEPLPGPFVCPTSVDFFDQQDMTIFDQQIQDNIAASPSTNLAKQNEWFSSGTSLQYLESSVSAGSVLKAVDATSTTPSNYLHCHAQRNTSNPPNFNEICSGNIASSNIAATKPRMRWTPELHERFVDAVNKLGGSEKATPKAVQKVMKVDGLTIYHKYRTVHHRPQLSDGRGMETTCEGLRVQIGLQKQLHEQLEIQRKLQLQVEEHSKYLAMIIEKQSESLRQLGALPRSLDAPTQVLDNRETCEGQTGDADSAEQKPEK

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Gene Transcript Chromosome Start End Strand Source
OsIR64_02g0037660 OsIR64_02g0037660.02 Chr02 36044722 36052143 - NAM
CDS seq

ATGGGGTGGGCGCACGAGACGGTGGCCATGGAGGAGTTGCTCGGCTTGGTGCGGGGCTTCGTCGACGTCCTCGTCCTCGCCGGCGGCCGCACCTCGTCTGGCGCCGCCGCCACCTGGCGCTCCGGTGACGTCAAGAAGGCCCTCCAATGGGCCCTCTTCTTCGAGGAGGTTTTCAAGAACCTGCGTGACGATGGTCAGTACGATGAGTCTGCAAGTGAGCTCGATGCTGCACTCGTTCAACTCGCTTCAAGCCCGAATTTCCCCAAGGGTATTGAGGATATCCGATCAAAAACACTTGCGATGGCAAGAGAGTTGGTTGTGAAGCATTTTCTGAAAACAACGAATGCGGAGAATTTAGGTGCTGTACTTCAAGCAGTTGTTGAGATGGATATGGATGGCATTTCTGCTAGTGGTGAATGCAATGTGTGCCAAGAGTATGTGCAATCGATTTTAGATATGAATTTACCTAGTTTGATGCGAACCAAGAATGCCCGTGATGTTGGACATTCCACTAGCTCTGATGAATTTTGTGAAGAATCCTTGTTTACGGGTAATTCACAGATTCTACTTAAAGAACTACAGAAGAAGCTGGATTCAGGATCGTGTATTTCTTTGGCTGAGAGAGAACTGAACACACTTCTAAAAAGCATGAAAAAGGACAGCTTTGATAGTGCAGGAAGTACATTGTGCACCTCAGCAACTGCTCAGAAAACACAAATCATCGACAAGTTTATCCTGTGGAAGCAATGGAAAGCAAAGTGTTTGTCGTACTTGCTTGATGAGCGTACCATTCGGATCATGTCAGGAACTAATATGATCTTTAATGCTCCCAAGGAGCAGTGGATGGGATTGTTTGAACCATTAAAAGTTTCTGCAGATTCTAGTCAAAGTGGCATCATTGAAGTCATGGAGCTATGCTTGTTGGGATTGGTTGCAAGGCAATGGAACTCATTAATAGAGAGCATCATGTCACATACTTTTAGTTCCTTTCCTATATCAAAACAATATGCTGATCTGCACCAGTTGCTTCAAGGAACAACTCAGGATGAATGCCAAGACAAGCTTCTTGGTTTCAAGGAGATGGATATTTGTGAGTATGCAAGGCAATCATTAGAGAGCGAACCGTACATATTATGGCTTCTACCTCCAGTTCTTACTGCTGCAGCAATGCCGCCACGGTCAAGCTTGTTTAAGATATACCTTGTTGAAATAGATAAGCAACTCGGTGAAGCTGCTTCCAAAGACCGGCCTACATCAACTATGAATCAGCTTCGCAATGGAAAAGTTCCCCAATATCTTTCGCCAGCTATAACTGTAGTACCAGAACTCTCTGAAGTTACATTTCCTAGTTTTTCAGAGCATAGACCATCCTATATCGAAAGGGAGCAGTGTGGTAGTTCTATCAACTCATTTGATGCTTCTACTCCAATGTGTATGTTAGCTTCCAACTTTACATCAGATCTTTATATCAACAAAAGTGAATCACCTAACGGCAAGCTTTCTTCTGAATCATATGCTATTGATACCTCTGGATGTGATTCTTCCTTGCCGCCAACACAGTCATTATACAAGGGTAATCCAAGTTCTTTAAGGATGGTTTATCCTAAAGTATCTGAACAGAATAGTTGGAGTCAAGAACCACTGCCTGGACCATTTGTTTGTCCAACTAGTGTTGATTTCTTCGATCAACAAGATATGACTATTTTTGACCAACAAATACAAGATAACATTGCAGCAAGTCCTAGCACCAACCTTGCAAAGCAAAATGAGTGGTTCTCATCTGGCACTTCCTTGCAGTATTTGGAAAGTTCGGTGTCTGCTGGTTCTGTGCTGAAGGCTGTTGATGCGACAAGTACAACACCTTCAAATTATTTGCATTGTCATGCACAGAGAAATACATCAAATCCTCCCAACTTCAATGAAATTTGTTCTGGTAATATCGCTTCTTCAAACATTGCTGCAACCAAACCAAGGATGCGATGGACACCTGAGCTCCATGAGCGGTTTGTTGATGCTGTTAACAAGCTTGGTGGAAGTGAAAAAGCAACTCCAAAAGCTGTCCAGAAAGTTATGAAGGTTGACGGCTTAACTATATACCATAAGTATCGCACAGTTCATCATCGACCTCAACTATCTGATGGTCGAGGCATGGAAACCACCTGTGAAGGATTAAGGGTCCAGATTGGCTTGCAGAAACAACTTCACGAACAACTTGAGATCCAAAGAAAGCTGCAGCTGCAAGTAGAAGAACACAGCAAGTACCTCGCCATGATAATCGAGAAGCAGAGCGAGAGCCTAAGACAACTGGGAGCATTACCAAGATCTCTAGATGCACCCACTCAGGTTTTGGATAACAGGGAAACGTGCGAGGGACAAACAGGAGATGCTGATTCAGCAGAGCAAAAACCTGAGAAATGA

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Protein seq

MGWAHETVAMEELLGLVRGFVDVLVLAGGRTSSGAAATWRSGDVKKALQWALFFEEVFKNLRDDGQYDESASELDAALVQLASSPNFPKGIEDIRSKTLAMARELVVKHFLKTTNAENLGAVLQAVVEMDMDGISASGECNVCQEYVQSILDMNLPSLMRTKNARDVGHSTSSDEFCEESLFTGNSQILLKELQKKLDSGSCISLAERELNTLLKSMKKDSFDSAGSTLCTSATAQKTQIIDKFILWKQWKAKCLSYLLDERTIRIMSGTNMIFNAPKEQWMGLFEPLKVSADSSQSGIIEVMELCLLGLVARQWNSLIESIMSHTFSSFPISKQYADLHQLLQGTTQDECQDKLLGFKEMDICEYARQSLESEPYILWLLPPVLTAAAMPPRSSLFKIYLVEIDKQLGEAASKDRPTSTMNQLRNGKVPQYLSPAITVVPELSEVTFPSFSEHRPSYIEREQCGSSINSFDASTPMCMLASNFTSDLYINKSESPNGKLSSESYAIDTSGCDSSLPPTQSLYKGNPSSLRMVYPKVSEQNSWSQEPLPGPFVCPTSVDFFDQQDMTIFDQQIQDNIAASPSTNLAKQNEWFSSGTSLQYLESSVSAGSVLKAVDATSTTPSNYLHCHAQRNTSNPPNFNEICSGNIASSNIAATKPRMRWTPELHERFVDAVNKLGGSEKATPKAVQKVMKVDGLTIYHKYRTVHHRPQLSDGRGMETTCEGLRVQIGLQKQLHEQLEIQRKLQLQVEEHSKYLAMIIEKQSESLRQLGALPRSLDAPTQVLDNRETCEGQTGDADSAEQKPEK

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Gene Transcript Chromosome Start End Strand Source
OsIR64_02g0037660 OsIR64_02g0037660.03 Chr02 36044426 36047818 - IsoSeq
CDS seq

ATGCATAATCTGGAAATTTCAGAAGAGACGCCTTATGCTGAATCATTGGCTGCAGGAAGTGAGAATCAGGGCCAATTTTATTCAGACATGATTTGCTCATTGGCTGTAGAAGATGAGAATCATATTCATATCCCAAATACTGGGAGTATGAGCTGTCCACTTGATCTGAAACTGCGTTGCTGTTCCTTCGGTACACAAGTTTTCGTTCAGGGAGATCCAAAGCTGCTGCTTTTTTGTGAAAAA

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Protein seq

MHNLEISEETPYAESLAAGSENQGQFYSDMICSLAVEDENHIHIPNTGSMSCPLDLKLRCCSFGTQVFVQGDPKLLLFCEK

OsIR64_02g0037660.03OsIR64_02g0037660.02OsIR64_02g0037660.01AS36044326 bp36046000 bp36048000 bp36050000 bp36052000 bp36054000 bpAll AS eventsIsoSeq based ASRoot based ASLeaf based ASPanicle based AS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
RI Chr02 36051097 36051712 - OsIR64_02g0037660.01 OsIR64_02g0037660.02,OsIR64_02g0037660.01 All
A5 Chr02 36045825 36045931 - OsIR64_02g0037660.03 OsIR64_02g0037660.02,OsIR64_02g0037660.03,OsIR64_02g0037660.01 All

Expression

Leaf Root Panicle
FPKM 0.056928 0.936991 0.843145

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0814600 RBH 0.000000 0.0 0.205891
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g56950 RBH 0.000000 0.000000 0.044334
Nipponbare | IRGSP 1.0 | RAP-db Os02g0814600 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0038390 RBH 0.148750 2.597258 0.503340
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0038420 RBH 0.073274 0.182887 0.283376
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0038260 RBH 0.479309 3.140049 2.741122
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0037890 RBH 0.000000 0.090814 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0037980 RBH 0.352233 17.151884 4.184102
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0569000 RBH 1.0270805 4.3707485 1.920463
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0599600 RBH 2.7211715 5.015536 9.6388105
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0037950 RBH 0.0 0.270810 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0037880 RBH 0.000000 7.549254 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0037980 RBH 0.000000 1.823877 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0038000 RBH 0.0 0.807185 0.307217
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0037670 RBH 0.0 2.958622 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G038320 RBH 0.0 0.352947 0.348912
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0038180 RBH 0.0 11.228327 1.619877
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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