Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsIR64_02g0036660 | OGI:02095900 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr02:35229647-35230288 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | TAAAAGCCCAAACACCTCTGGATTTATTTAATCATCAATTGAAATATTATTACATATGTCTCCCGTAATATTGGGAAGAACGACATACCAAATCAATCACTCGGAAGTTATAAACTTCAACAAAAGGAAACAACTTAAAAGGTAAAAGGAATAAACATGACAATGTAATGCAGGGCTGGCCGTTGGGTGAGAACCATTAATAATGTCGTCGCTCGGTCATGATGAAGGAGCAGATGGGGAGGTACTACATAATCATGCTTGTTTCATTGTTTGCATATAAGCGACAACTTTATCAAGGAATACCTCGGCCTCCTTAGCATCAGCTTCGCAACTTTCTGCACACTTCTTGCTTGTGGCGGGATCCTCCTTATATACTGCATTACACTCATTGTTGCAAAAATCTATGAATCTATCCGCCTTTAGATCCTTCACTCCCTTATGGGCCTCAAATATAGACTTGGTCTTGATGAAGCAGAAGTCTTCACATTGTTTCTCGTCGATGGGGGCTTTCTTTTTCTGCTCACTGCATTCCTCTTTGCACCCAGCTCTCAGTGTCTCCTCTAGCGTCTCTGGCTCCTTTCCCATGACCGCCACAAGGGTGGCAAGGAGCAGGGCCACCGCAATGGTCTTGTTCTGGGCCAT
More
|
||||||||||
CDS seq | ATGGCCCAGAACAAGACCATTGCGGTGGCCCTGCTCCTTGCCACCCTTGTGGCGGTCATGGGAAAGGAGCCAGAGACGCTAGAGGAGACACTGAGAGCTGGGTGCAAAGAGGAATGCAGTGAGCAGAAAAAGAAAGCCCCCATCGACGAGAAACAATGTGAAGACTTCTGCTTCATCAAGACCAAGTCTATATTTGAGGCCCATAAGGGAGTGAAGGATCTAAAGGCGGATAGATTCATAGATTTTTGCAACAATGAGTGTAATGCAGTATATAAGGAGGATCCCGCCACAAGCAAGAAGTGTGCAGAAAGTTGCGAAGCTGATGCTAAGGAGGCCGAGGTATTCCTTGATAAAGTTGTCGCTTATATGCAAACAATGAAACAAGCATGA |
||||||||||
Protein seq | MAQNKTIAVALLLATLVAVMGKEPETLEETLRAGCKEECSEQKKKAPIDEKQCEDFCFIKTKSIFEAHKGVKDLKADRFIDFCNNECNAVYKEDPATSKKCAESCEADAKEAEVFLDKVVAYMQTMKQA |
||||||||||
Function | Uncharacterized protein OsI_009113 [UniProtKB/Swiss-Prot:A2XAM0] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsIR64_02g0036660 | OsIR64_02g0036660.01 | Chr02 | 35229647 | 35230288 | - | NAM | ||
CDS seq | ATGGCCCAGAACAAGACCATTGCGGTGGCCCTGCTCCTTGCCACCCTTGTGGCGGTCATGGGAAAGGAGCCAGAGACGCTAGAGGAGACACTGAGAGCTGGGTGCAAAGAGGAATGCAGTGAGCAGAAAAAGAAAGCCCCCATCGACGAGAAACAATGTGAAGACTTCTGCTTCATCAAGACCAAGTCTATATTTGAGGCCCATAAGGGAGTGAAGGATCTAAAGGCGGATAGATTCATAGATTTTTGCAACAATGAGTGTAATGCAGTATATAAGGAGGATCCCGCCACAAGCAAGAAGTGTGCAGAAAGTTGCGAAGCTGATGCTAAGGAGGCCGAGGTATTCCTTGATAAAGTTGTCGCTTATATGCAAACAATGAAACAAGCATGA
More
|
|||||||
Protein seq | MAQNKTIAVALLLATLVAVMGKEPETLEETLRAGCKEECSEQKKKAPIDEKQCEDFCFIKTKSIFEAHKGVKDLKADRFIDFCNNECNAVYKEDPATSKKCAESCEADAKEAEVFLDKVVAYMQTMKQA |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 45.674889 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0798501 | SBH | 0.595122 | 0.348059 | 39.825649 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g55510 | RBH | 0.404287 | 0.232405 | 10.182012 |
Nipponbare | IRGSP 1.0 | RAP-db | Os02g0798501 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0037130 | RBH | 0.072179 | 0.0 | 29.770575 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0037240 | RBH | 0.0 | 0.0 | 49.483997 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0037060 | RBH | 0.0 | 0.0 | 100.399078 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0036680 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0036870 | SBH | 0.0 | 0.0 | 119.001999 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0556800 | RBH | 0 | 0.0413635 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0036650 | RBH | 0.0 | 0.0 | 46.547695 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0587400 | SBH | 0.285241 | 0 | 0.019114 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0036900 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0036730 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0036960 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0036950 | SBH | 0.0 | 0.0 | 17.545317 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0036550 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G037330 | RBH | 0.000000 | 0.000000 | 11.935510 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0036940 | SBH | 0.0 | 0.0 | 97.484192 |