Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_02g0025890 | OGI:02072540 | 6/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr02:26808384-26808615 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGAGAGAGTGCAACAACAGATTCAATCCCGAGGGTTTCGTGGTTGCGCTCTCAGGGGGAGGGAGTATGACCACCGTGGTGCTTCCACAAGTATATCCAAATCTACAACAACGACAACATTGTGGCAGCCTTGGTCATCGATGAGTGCGACTCTCGGAACGGCTGCAACTTAGGGACCGGCTACCTGCTGCCATGCAGCCCCAACACCATCGCCGCGTCCCCAGGCGTCTAG |
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| CDS seq | ATGAGAGAGTGCAACAACAGATTCAATCCCGAGGGTTTCGTGGTTGCGCTCTCAGGGGGAGGGAGTATGACCACCGTGTATATCCAAATCTACAACAACGACAACATTGTGGCAGCCTTGGTCATCGATGAGTGCGACTCTCGGAACGGCTGCAACTTAGGGACCGGCTACCTGCTGCCATGCAGCCCCAACACCATCGCCGCGTCCCCAGGCGTCTAG |
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| Protein seq | MRECNNRFNPEGFVVALSGGGSMTTVYIQIYNNDNIVAALVIDECDSRNGCNLGTGYLLPCSPNTIAASPGV |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_02g0025890 | OsIR64_02g0025890.01 | Chr02 | 26808384 | 26808615 | + | NAM | ||
| CDS seq | ATGAGAGAGTGCAACAACAGATTCAATCCCGAGGGTTTCGTGGTTGCGCTCTCAGGGGGAGGGAGTATGACCACCGTGTATATCCAAATCTACAACAACGACAACATTGTGGCAGCCTTGGTCATCGATGAGTGCGACTCTCGGAACGGCTGCAACTTAGGGACCGGCTACCTGCTGCCATGCAGCCCCAACACCATCGCCGCGTCCCCAGGCGTCTAG
More
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| Protein seq | MRECNNRFNPEGFVVALSGGGSMTTVYIQIYNNDNIVAALVIDECDSRNGCNLGTGYLLPCSPNTIAASPGV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0637000 | SBH | 0.000000 | 0.217803 | 14.539249 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42450 | SBH | 0.073259 | 0.124872 | 3.670645 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0637000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0026530 | SBH | 0.000000 | 3.997794 | 3.847389 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0026400 | SBH | 0.843490 | 19.928493 | 11.416058 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0025970 | SBH | 0.0 | 0.145764 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0026090 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0415800 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0026240 | SBH | 0.0 | 1.029148 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0025910 | SBH | 0.212668 | 19.059048 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0026290 | SBH | 0.0 | 55.044846 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0026100 | SBH | 0.228786 | 2.081060 | 3.009262 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0025770 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G026410 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0026150 | RBH | 0.0 | 0.0 | 0.0 |
