Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsIR64_02g0017600 OGI:02050950 | 16/16 IR 64 | OsIR64RS1 | Gramene(+IsoSeq) Chr02:18505087-18512208
Gene Symbol ERF140, OsERF#140, OsERF140, AP2/EREBP#013, AP2/EREBP13
DNA seq

AGGAGATAGAGTGCGATAAGAGAGAGAGAGAGAGCCGAGTCGCCGTAGGAGGAGGGCTAGAGAGAGAAAGGTGGTAGTAGAGTAGTAGTAGATTTGAGGAGGTGAGAGAGAGAGAGAGTCATCTCTCTTCTTTGTATCCCCCGTCGCCAACTTCTCCTACCAACTTCTCTCTCTCTTTTTTTCTCCTCCTCCTCTTCTTCTTGGTGGCCGCTCGCCGCCGCCGACGCCGACGCCGCCGGCGGGTCTCGTCGTCGGTACGTGTTACTACGGGGGCCGGTCTGTGGCCCCTACCCTCCGTCGCCGTCGTCTTTTCTTGTTCGCGTGTGCGTTTATTTCTCGGCCAGAGGTTGGCGGCTTCCGGCGGTTCTTGGATTCCGGCAGGATTGATCGGCGTGGTGTTTCTTGGCCCCCCCGCGAATTCCGGCGGCATTCTGATGGCGTGCTTCTTCTCTCTTCTTTTTTTCTCTTGCTGGTTGTTTTGTTGAGTTCGTGTGGGGTGGTAGGATTGGAAGGTGGCGGTGGTTGGGGGGTCTTTGGGTGGTGAGGGAAGGGGGTGAATTCTCTGTGTTCTTGGGGGTTGTTGTTGTTATCATCTGAGCCTCTTAGGATTGGTTGGGTGGCGGAAGGTTGGTTGTTGCCACCTGCCCTGTTCGTGTTTGCGATTGATTTGTACTACACAGTGGGTGCTTCTCCTATGTGCAAATCAGATAATTCCGCGGTAACAAAGTCAGCGTAGGATTATGTTGGTGATGATGATGACTAGTGTGCCTGAAAATTCCATCTTTGCAGTAGTCCTTGGCTTGATAATACAGATAGATTCTTTGCAGAGTTCGTGCACTTCACTGTCACAACAAAGAAATCTTTTTTCCTCAAGAGTTAAATTCTAGTAGGATTCGTTGGATTCTGTAGGCCCTGGAGTGTGCTTGCTAGGTCTGTGCTAACTGTTAGTGGTGACTGGTGACAAGTACATCACCTTGATTTCTTCTTTTTTTTTTCACTCACTATTTTTAGGGCGTTTATTTGGTTACTCCTTTCGCCGAGTTTCAGTTAAAGCTGACCTGTGCCTCCACGTGACGTTAGTGGGGCTTTTGTCAGATGATACAGCTCTGTTGAGGATCGTGCTGGACATTGCTGCACTGTCAGCATCCTTGTTCCTTTGCTGTCTATTTGAGCCCTCAATTTCCAGTGCCTGTAGTACTCTTCACTGTCTCCATGGAAGTTGTAGGCCTGTTGAATGTTGATGTCTTATTGTCAACAGTTTTGTTCCCAGAGATTGATAACTCACATGAGTTTATCAGTTTTTGTAGTACGATTGGCTCCTTTAGATTCCATTTTATTGATTAGTAACTTAATGCTAATAAGTAAAAAGATATGAGTGTGATCTTCCACATTTGTTTGTTAGTGCATTAACCCGCCACTAGGTTTGCCAGTCGCATCTATGTGCTACTATCACAAAACATTTTTTTTTTTGTCTATTGATGTGAAGAACAAATAGTCAATATTATTCTGCATATATTTGGCAATATGGTTAAGATTACCATTCATAGGGAAGAAATAGATATGGCCAATAAGAGAAGTGTAACGTAATTCCAGTTCGAGAAATGGTGGCAGTACCAAATGCCGAATTAGCGGCTGTACCAAATGATCAATGCCTCTGGGGTTTCTCTTCTCTTCAGCTCTCCCCGGTTTCACCAATGTGTTGGGCACTGAACACTGTTGTTGTTTCCAGCAGGCTAGTATTGTCTAATGTAATCAAAAGCTCTTGCATTAATTGCGACACACTTATTTCTCTCACGATGTCTCCATATTTGAACCTAAAACCTTTTTTTATACAACCTTATAGTACTCGCTTTTATAATTGGTTTAGAAAATCTTATATTTCTAACTATATTGCAGGTGGCATTGAAATATGGTTAGCTTGAGGAGGCGCCGGCTTTTGGGGCTTTGTTCTGGTATGAGACTCACTGCAATGTCATGATTTGTTTCCTGATATGTTTACGTAATTTTTCAGAGGAACTCTGTTGTGAAAATGTGCTACTTTATTTACTTACAAGTTATATACAAAGTCATCATAGCATGTCTTTCTTGGTTATGCTTATCAATTCTATTATGATCTGACTCTTCAATGGAACATGCTATACCTACTCTTTCAGATTAAAAAAAGCAGTACTGTGCACCCAATTTACAAATATCTTGTACATGAAATTTCTTGATTTTGTTTCTCTATTGGTATACCATCTGTAGTCAGCTTCCGTTGATACAACTTTGCAACTCCTTGTATACGTGTTTTATGTTGCTCCCCATGGTGTATAAGTTAGTGGGATTGGGAAATTATCTGGAGACCATAGGAGGAATTTGAATAGTCAATGGACCTTACAAGAACATGATTTGGCTGCGAACTAATTGCTTCCAGCACCAGAATTATCTGTGCAAAGAATTTAGACGGGAGTTGCCGTAGCCCTGATGGTACCATGATTAGATGGAGCACGTATAATCTGTTCCATATTGCATGGTGTGGAATGAAGTACTTTAAACATTTTTCTGCTGACTGGTTAGCTTACTATGAGCAGTCTTTGCAAAATTTATTATGGAAATCAATAAGGGAAGGCTTTCTATATATGTCGTGCTTCCTCTACCGTTCTTGTAATTTTTATTCAAAGATGTATATCAGTGCCCTTTGTGGGTTAAAAATCAATTTTGTTTAAAGAGTAAGTTGCATTGCCCACCATCTGATTGTAAACACAGCAGCTTGCACTATTTGTAAGTTAACACACCACTTCCACCTTCTAAGTTCACAGAAATTGGGCTCTCTGAACCAGGTTCAGTGGTTCATGAACATTATGTGAGGTGGGATGCACCCAAATGCTGGTGTAGCAATGGCCAGAGGCCATTCATTGTCCTGTTAGGATGCTGTGCCATACTGAAGGTGATTTCTTTGGGGGCATGTCTGAGCTGGCTTATTCACCCACACAGGAGGTGAAAGTGATTTCCTTGTTTTGCAATGGCATAACAGAACGGTCAAGCCGATTCTCACCCTCCATTTGGTTAGCTCCTGACATCACAGGTCATGTTGGACACACCTGGGTCTTTGTTCACATGGATATATGAGCCATTTCGTGGATGTGCCCACAGAGGTCTCAATGCACCATTTCCATCTCATTGTTGGAATGAGGCAAACCTGTAACAATAAACATGCTTTTACATGGCGGAAGAGTGCTCAATTTGTCCAAATTACATGGTGGAAGATGATATTTTAATGTGTTAAATGTCACAAGCTGCGGTTTTACATGAACAGATGGTGCAAAATTGCATATTACTTATGTTTAAATAAATTTAGAGGGCTATCGCAAATGTCAGCGTCAAGTGTTCTGGTATTCTTTTCTGAAGCTACACGTAACTCTAGAAGTATTTCAGCAAGAAGGGTGTAAGTTCATACTATTGTGTAGGCACACAGAAATGAAACAAGGGCAGATGTAGCCAGATTCGTGCAACTATACAAATCCTAATATAGTAAGACATCGTAACTACAAATATGCTGTGTGAATCACTGTTAGAAGCACATGGCTTCTGGTGAACTGTTGATTTGACCAACAATCGAGATTACGGACAAAATACTATTGGCAAAATAAGATTATTTCGAAGTATGACTATATTGTTTTCTCATCGTACTTCTTCCCATGAACCCAAGCAAGGGGATCATTTATGCAACACATACCTCCCTAGACAGCTAGACCAATGAATGTATTATGCGTACACTTTGAACGCTCATATTAATTTACCTTTTGTTTCAGGGAAAGATTCGTTACCGGTTGATTTTCCAAAGCCTAGTGACAATGAAAATTCTGTGGAAGTTGCACACCCTAACATAAAGCCATTCAGTGTGCACCCGCTGCCCCTGGTAAGTTTAACACCTCAATGCCAGTACAACTTTGCTGCAAAAATGTTTTGCTAGTTGCCACCTTGTGTTGTGTTTGATTATCTGTGAAAACCATGCTATCACAGTTTCTATTTATAGTTAATGGATATTACAAGTTATGGTATATTCAAGCATATCACCAAAGTTTCTGTGACAGAACTCTGACAATCATTTTCGCAAGTTAATTTACCATTGTTGGTTTAATCTTTACTTTGATTTTTACCATTTTAATTGTATTTTAGAATAGTGTGAATAAAATAACTGTATTTTCGCAAGGCTGTCATTGACCATAAAATTATACTACCAAATTAGCACCTTCAAAAAACTAATGGTATGATTTAAGGAGTTCAAATTTATACCCACTACATTGATAAATCCTTGTCAACTTTTACTAAAATGGAGTTACCTTGGCAATAATTTGTTTATGCCCATTTTGACTTCTCCATTAATAACTGGATTATGGGTCCACTGCGTTTTTGGCGGGCAAGTAAATGAGGAAAATTAATGAGGCCAAATGAGTGAATATTAATTGGAAAGCACTCATGGGCTCGTGGCACATATTTGTGAAAGTAAAAAGCCATAGTAAAAAGTTACAAGTATTTGTGAAGGATATCAAAATCGAATGGGATTCTGATTTTGGTTTTGAACTTCGAATATGTATTCAGTTGCTCTTTCTCTGACAATAAATGGTACAACCTGTGGCTTTTCAGAAATAACACGTCAGGCACTGACAAGCTATTTCTTAACATAGCGCTGTAAGATAGATTGTGCTTGACTGCTCCTTGTGTCAATGGACTACTTTGATGGTGTTCTCTTTTTATCATATCTACTTTACCTTCTAGTACTTTTATCTACATGGTGGGAAAATAGGTAAAACCAATGGATTGAATAACAAGATTGCTGCTCTTGTTTGTTTTGTTGCAGTGCCACTTTTCAACAGTAGCTTCATGTGTTATACTAATTCCTTTTTTTTCTTCTGTTTCATATGGTTTGCTTTATAGTGACTCCTTAGAAACTACATTATTTTCTGATGCTTCTGAACACATGCTATTTGCACTGGCAACGATGGTTTTGTTTGATAAAATGTACCTTTTTGTTGCAGACTAAAAATTCTGATGTACTTCTGGAATCTTCAAATGGGTCTGATTCTTTAAAGGAAGAGAAAAACCATTACTATCCAGGTTCATATTATTTCATAGTACTCTTTGTATTTCCTTAAAGTATATAGTCCAGGTAAATTTTATATGGCAAATGGTTGTTTTATAATTCGGTATCAGAAATCTTATCTAGGTACAACTCTATAATAGTCCCATCAAATTAGGCTGACTTTGAACTTCTTGAATCATGATGAAACTGAATCCATTCTTGGCCCAACTTTCTCATTGAAGCATTGAACACAACAGGATATATTATGTTTTAGCAACCAATAGAAAGGACGCTTCTGATCCATGAACAGACTTGCACATGAATTGAGATTACCCCGAACGTGATGTCGAGGATGAAACTGCTCTCACCAAAACCAGATAGAGTTGAATTACATAACTAGGTGACCTGACCTGGGATGTTTCACTAGAGCCTTTTCTTTCTCTAAAAGATTCTACCTTTTCTTTTCCATGAATTCCCTTTTTTTATTCATGTTCAGAAACTCTTTTGTTATTTTATTTCAGATTTGCATTGGTTACCTTCATCCTTAATGAGGTATCCAAAGGCATAAGCTGAACGTGTCATTTTTATTTTGACAAAAATATAATTTGCTTCCTTTTATATTTATAGGCAAGGAAATCAAGCGCAGAAAACGACATAGAAGAAAGCAGTATGTGGACCAAGAACCATGCATAATGAGAGGGGTCTACTTCAAAAACATGAAATGGCAAGCTGCTATAAAAGTTGACAAGAAACAAATCCACTTAGGTACTGTCGGGACACAGGAGGAAGCAGCCCGACTATATGATAGGTATTAGCTGGACTTTTATGCACGATTATGATATTTCTATCTTTGCATATAATATCATGTTCTGCTTTGTTAGTAATATGCTGATACTTGTATACAATACTATAAATCTAATTTACTTTAATATCATGAAGAAGTGATATATTGATATATGCTAGAAAATATTACAAAGGAACTAGCTAGTCTGCAAAGTTATCGGAGTAATAGCCAAAAATTTTTAGAAGCACCTTCACCAAAACAGTACAATGTTGCTTTATCAAATCTGTTTGTTGTCTCAATAAACTAAGGTTTTTTTATTATATAATGATTAAAGACTGTTAACATCCTAAAAGATCAATATTGTTCCATGCTTAAGGTGGACTACTCATCATTGTTGGCATACAACCCTCAAGCCTGTATACATACAGTATAGGTTGCATCATATGCATATTACTTCAAACGCCACTTGCATATCTGCCGCGGCCAACTGATCATAATTTATTGTGTAGGAGAAGCTGATATTTTGTTTGAACTGACTAGATTTGACATATCAACACAGGGCTGCTTTTATGTGTGGAAGGGAGCCAAACTTTGAACTTTCTGAGGAAGAGAAGAAAGAACTACAGAATTACACCTGGAAGGACTTCTTGGATATGACTCGAGACACCATAACCAGCAAAAGTAAGACGAGAATTTTAAAATTTCTTGTGGTTGTCACTTAATTTTTCCCTGCTAGTAGTCAAGTACATCAATATATATATCATTAGTAGTAGACTATAACATACTTTTTGTTCATTTGTTTGTCTTCAGAACAAAGGAAAGTTGGATTAATAAGGCGCAATAAGACGGACTCGCTGGTAGGACAGAGTGATGGTGATACTGAGATGATCAATGGTGGCGGCTCATCGCACTCGGAAGATGGAGATGCTGAGACCTCAGCATCTTAATTAAGACTGCCACCAGAGTTCATGGACAGCCAGATTGGGTCTTTCAACAGATTCGTTTCAATGAAGACATAATTTCCATTTAGGTTTTTGTTCTCTCAATAATTAATTTCATGTGCATAAGGGCCCTGATGGTCTGATAAAGGTTAGGCTAGAGAAATCATGCCATCCCATATAAAGTTGGAGATGGTCCATTATAGGAACACATTTCTCTGAGCAAATGAGCAATCATGTATAGAAACACCAATTCCTGAACTGTGTATATCTTTACCCCAAATTTCTCTACATGTAACTAGATTACACATTTAATAAAGAATTTATTTTTCCTTTCA

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CDS seq

ATGGTTAGCTTGAGGAGGCGCCGGCTTTTGGGGCTTTGTTCTGGGAAAGATTCGTTACCGGTTGATTTTCCAAAGCCTAGTGACAATGAAAATTCTGTGGAAGTTGCACACCCTAACATAAAGCCATTCAGTGTGCACCCGCTGCCCCTGACTAAAAATTCTGATGTACTTCTGGAATCTTCAAATGGGTCTGATTCTTTAAAGGAAGAGAAAAACCATTACTATCCAGGCAAGGAAATCAAGCGCAGAAAACGACATAGAAGAAAGCAGTATGTGGACCAAGAACCATGCATAATGAGAGGGGTCTACTTCAAAAACATGAAATGGCAAGCTGCTATAAAAGTTGACAAGAAACAAATCCACTTAGGTACTGTCGGGACACAGGAGGAAGCAGCCCGACTATATGATAGGGCTGCTTTTATGTGTGGAAGGGAGCCAAACTTTGAACTTTCTGAGGAAGAGAAGAAAGAACTACAGAATTACACCTGGAAGGACTTCTTGGATATGACTCGAGACACCATAACCAGCAAAAAACAAAGGAAAGTTGGATTAATAAGGCGCAATAAGACGGACTCGCTGGTAGGACAGAGTGATGGTGATACTGAGATGATCAATGGTGGCGGCTCATCGCACTCGGAAGATGGAGATGCTGAGACCTCAGCATCTTAA

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Protein seq

MVSLRRRRLLGLCSGKDSLPVDFPKPSDNENSVEVAHPNIKPFSVHPLPLTKNSDVLLESSNGSDSLKEEKNHYYPGKEIKRRKRHRRKQYVDQEPCIMRGVYFKNMKWQAAIKVDKKQIHLGTVGTQEEAARLYDRAAFMCGREPNFELSEEEKKELQNYTWKDFLDMTRDTITSKKQRKVGLIRRNKTDSLVGQSDGDTEMINGGGSSHSEDGDAETSAS

Function Ethylene-responsive transcription factor-like protein At4g13040 [UniProtKB/Swiss-Prot:Q56XP9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsIR64_02g0017600 OsIR64_02g0017600.02 Chr02 18509268 18512207 + NAM
CDS seq

ATGCTTCTGAACACATGCTATTTGCACTGGCAACGATGGTTTTGTTTGATAAAATGTACCTTTTTGTTGCAGACTAAAAATTCTGATGTACTTCTGGAATCTTCAAATGGGTCTGATTCTTTAAAGGAAGAGAAAAACCATTACTATCCAGGCAAGGAAATCAAGCGCAGAAAACGACATAGAAGAAAGCAGTATGTGGACCAAGAACCATGCATAATGAGAGGGGTCTACTTCAAAAACATGAAATGGCAAGCTGCTATAAAAGTTGACAAGAAACAAATCCACTTAGGTACTGTCGGGACACAGGAGGAAGCAGCCCGACTATATGATAGGGCTGCTTTTATGTGTGGAAGGGAGCCAAACTTTGAACTTTCTGAGGAAGAGAAGAAAGAACTACAGAATTACACCTGGAAGGACTTCTTGGATATGACTCGAGACACCATAACCAGCAAAAAACAAAGGAAAGTTGGATTAATAAGGCGCAATAAGACGGACTCGCTGGTAGGACAGAGTGATGGTGATACTGAGATGATCAATGGTGGCGGCTCATCGCACTCGGAAGATGGAGATGCTGAGACCTCAGCATCTTAA

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Protein seq

MLLNTCYLHWQRWFCLIKCTFLLQTKNSDVLLESSNGSDSLKEEKNHYYPGKEIKRRKRHRRKQYVDQEPCIMRGVYFKNMKWQAAIKVDKKQIHLGTVGTQEEAARLYDRAAFMCGREPNFELSEEEKKELQNYTWKDFLDMTRDTITSKKQRKVGLIRRNKTDSLVGQSDGDTEMINGGGSSHSEDGDAETSAS

Gene Transcript Chromosome Start End Strand Source
OsIR64_02g0017600 OsIR64_02g0017600.01 Chr02 18506929 18512207 + NAM
CDS seq

ATGGTTAGCTTGAGGAGGCGCCGGCTTTTGGGGCTTTGTTCTGGGAAAGATTCGTTACCGGTTGATTTTCCAAAGCCTAGTGACAATGAAAATTCTGTGGAAGTTGCACACCCTAACATAAAGCCATTCAGTGTGCACCCGCTGCCCCTGACTAAAAATTCTGATGTACTTCTGGAATCTTCAAATGGGTCTGATTCTTTAAAGGAAGAGAAAAACCATTACTATCCAGGCAAGGAAATCAAGCGCAGAAAACGACATAGAAGAAAGCAGTATGTGGACCAAGAACCATGCATAATGAGAGGGGTCTACTTCAAAAACATGAAATGGCAAGCTGCTATAAAAGTTGACAAGAAACAAATCCACTTAGGTACTGTCGGGACACAGGAGGAAGCAGCCCGACTATATGATAGGGCTGCTTTTATGTGTGGAAGGGAGCCAAACTTTGAACTTTCTGAGGAAGAGAAGAAAGAACTACAGAATTACACCTGGAAGGACTTCTTGGATATGACTCGAGACACCATAACCAGCAAAAAACAAAGGAAAGTTGGATTAATAAGGCGCAATAAGACGGACTCGCTGGTAGGACAGAGTGATGGTGATACTGAGATGATCAATGGTGGCGGCTCATCGCACTCGGAAGATGGAGATGCTGAGACCTCAGCATCTTAA

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Protein seq

MVSLRRRRLLGLCSGKDSLPVDFPKPSDNENSVEVAHPNIKPFSVHPLPLTKNSDVLLESSNGSDSLKEEKNHYYPGKEIKRRKRHRRKQYVDQEPCIMRGVYFKNMKWQAAIKVDKKQIHLGTVGTQEEAARLYDRAAFMCGREPNFELSEEEKKELQNYTWKDFLDMTRDTITSKKQRKVGLIRRNKTDSLVGQSDGDTEMINGGGSSHSEDGDAETSAS

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Gene Transcript Chromosome Start End Strand Source
OsIR64_02g0017600 OsIR64_02g0017600.03 Chr02 18505087 18512208 + IsoSeq
CDS seq

ATGATAGGGCTGCTTTTATGTGTGGAAGGGAGCCAAACTTTGAACTTTCTGAGGAAGAGAAGAAAGAACTACAGAATTACACCTGGAAGGACTTCTTGG

Protein seq

MIGLLLCVEGSQTLNFLRKRRKNYRITPGRTSW

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.456055 0.807435 1.855860

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0499000 RBH 8.281582 5.718417 3.311847
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g29550 RBH 5.996253 4.491720 0.962198
Nipponbare | IRGSP 1.0 | RAP-db Os02g0499000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0018010 RBH 0.816889 13.903348 8.479001
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0018150 RBH 2.027596 9.588631 3.933627
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0018060 RBH 2.666546 23.981377 12.568126
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0017880 RBH 0.444330 0.465963 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0017810 RBH 42.591091 21.769314 21.394749
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0291100 RBH 18.4695915 12.698364 11.0792705
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0311600 RBH 31.2706585 14.0464665 3.8953435
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0018110 RBH 2.181486 0.355811 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0017670 RBH 1.540548 5.347378 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0018240 RBH 32.224518 15.069327 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0017990 RBH 3.214850 0.955100 1.500935
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0017730 RBH 1.585037 8.935254 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G018180 RBH 0.849888 2.675263 2.773512
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0017900 RBH 5.809231 23.836138 10.683086
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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