Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsIR64_02g0004190 OGI:02002380 | 13/16 IR 64 | OsIR64RS1 | Gramene(+IsoSeq) Chr02:2954195-2955644
Gene Symbol -
DNA seq

AACATAAAACAGTTCACACAAACTTTACTGAAATTTCCATATATAACTACAAAGAACTAGAAAGAACAACTGACACCAGGAAGAATGCAGAAAAGTCTACAATATTATCAAGAAAAGAACATATTTGCCTTGGACCACATAGGACAGTCACCTTCCTGCCATGCCAATTTTAGGATCACATGCTCTAATTGCCAAAGTGAAATTGAAGTACTAAACATAAAATGAAAACAACGTGATAGATAACAGTTTGGCAAATGGGTACTTCAGTTGTCCTATTTAGTCATTCAACCACGAAATTCATACCTCCGGACTTCGAACGCGGTCTGTTCAAACATGCAGGGTTCGAAACATGCATTCAGTTGTGTATATATATCCTCACCGAACAGTGTAACTTTTCACGAACAAATATTAGTTGCCAAATTCTAAGTCCAAACACTGCTGTGATGGGAGAGATCATGAAGGAGGCACCACATTCTCTGTGGAGAAGCAGGCTAGGGATGCCTTTCTCAGGTCTCGCTGCTGCTGCCTTATTGTTGCTGCTGCTCTCCATGGCCAACTCCACCATTGCATGCCTTGAGCAGGAGAAGAGCTCTCTCCTCCGGTTCCTTGCTGGGCTATCGCATGACAATGGCATCGCCATGTCGTGGCGGAATGGCATCGACTGCTGCGCGTGGGAAGGCATCACCTGCAGTGAAGACGGGGCTATAATTGAAGTCTATTTGGTTTCTAAAGGCCTAGAAGGGCAGATCTCACCATCCTTTGGAGAGCTCAGAAGCTTGCTGTACCTCAACCTGTCCTACAACTTGCTCTCCGGTGGCCTTCCTGAGGAGCTGATGTCCTCTGGCAGCATCATCGTCCTTGATGTCAGCTTCAACCGCCTCGACGGGGACCTGCAAGAGCTGAATTCATCAGTATCTGACCGGCCACTGCAGGTTCTGAATATCTCAAGCAACAGGTTTACAGGGGAATTTCCATCCACCACATGGGAGAAAATGAGGAGCCTGGTTGCAATCAACGCCAGCAACAACAGTTTTACTGGGCAGATACCTTCCTCTTTCTGTACCGGCTTGCCATCCTTCGCCATGCTTGATGTTAGCTACAACCAGTTCAGTGGCAGCATCCCCCCTGGAATAGGGAAATGCACTGCCCTTAAAGTGCTCAAGGCTGGTCACAACAACATCAGTGGAGCCCTCCCAGATGATCTCTTCCATGCCACATCACTAGAGTGCCTCTCTTTTCCTAACAATGATTTGCAAGGAACAATTGATGGTGTACTCATGATAAAGCTCAGCAATCTGGTTTTTCTTGATCTTGCGTGGAACAGATTCAGTGGCACAATACCAGATTCTATAGGCAAGCTGAAGAGACTACAGGAGTTTCACATGAACAACAACAACATATCTGGGGAGCTGCCATCATCCTTGGGTGATTGCACAAATGTAATCACCAT

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CDS seq

ATGGAAGAGATCATCTGGGAGGGCTCCACTGATGTTGTTGTGACCAGCCTTGAGCACTTTAAGGGCAGTGCATTTCCCTATTCCAGGGGGGATGCTGCCACTGAACTGCTAACATCAAGCATGGCGAAGGATGGCAAGCCGGTACAGAAAGAGGAAGGTATCTGCCCAGTAAAACTGTTGTTGCTGGCGTTGATTGCAACCAGGCTCCTCATTTTCTCCCATGTGGTGGATGGAAATTCCCCTGTCCCCGTCGAGGCGGTTGAAGCTGACATCAAGGACGATGATGCTGCCAGAGGACATCAGCTCCTCAGGAAGGCCACCGGAGAGCAAGTTGTAGGACAGGTTGAGGTGATGCCTTCCCACGCGCAGCAGTCGATGCCATTCCGCCACGACATGGCGATGCCATTGTCATGCGATAGCCCAGCAAGGAACCGGAGGAGAGAGCTCTTCTCCTGCTCAAGGCATGCAATGGTGGAGTTGGCCATGGAGAGCAGCAGCAACAATAAGGCAGCAGCAGCGAGACCTGAGAAAGGCATCCCTAGCCTGCTTCTCCACAGAGAATGTGGTGCCTCCTTCATGATCTCTCCCATCACAGCAGTGTTTGGACTTAGAATTTGGCAACTAATATTTGTTCGTGAAAAGTTACACTGTTCGGTGAGGATATATATACACAACTGA

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Protein seq

MEEIIWEGSTDVVVTSLEHFKGSAFPYSRGDAATELLTSSMAKDGKPVQKEEGICPVKLLLLALIATRLLIFSHVVDGNSPVPVEAVEADIKDDDAARGHQLLRKATGEQVVGQVEVMPSHAQQSMPFRHDMAMPLSCDSPARNRRRELFSCSRHAMVELAMESSSNNKAAAARPEKGIPSLLLHRECGASFMISPITAVFGLRIWQLIFVREKLHCSVRIYIHN

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsIR64_02g0004190 OsIR64_02g0004190.02 Chr02 2954195 2955405 - NAM
CDS seq

ATGGAAGAGATCATCTGGGAGGGCTCCACTGATGTTGTTGTGACCAGCCTTGAGCACTTTAAGGGCAGTGCATTTCCCTATTCCAGGGGGGATGCTGCCACTGAACTGCTAACATCAAGCATGGCGAAGGATGGCAAGCCGGTACAGAAAGAGGAAGGTATCTGCCCAGTAAAACTGTTGTTGCTGGCGTTGATTGCAACCAGGCTCCTCATTTTCTCCCATGTGGTGGATGGAAATTCCCCTGTCCCCGTCGAGGCGGTTGAAGCTGACATCAAGGACGATGATGCTGCCAGAGGACATCAGCTCCTCAGGAAGGCCACCGGAGAGCAAGTTGTAGGACAGGTTGAGGTGATGCCTTCCCACGCGCAGCAGTCGATGCCATTCCGCCACGACATGGCGATGCCATTGTCATGCGATAGCCCAGCAAGGAACCGGAGGAGAGAGCTCTTCTCCTGCTCAAGGCATGCAATGGTGGAGTTGGCCATGGAGAGCAGCAGCAACAATAAGGCAGCAGCAGCGAGACCTGAGAAAGGCATCCCTAGCCTGCTTCTCCACAGAGAATGTGGTGCCTCCTTCATGATCTCTCCCATCACAGCAGTGTTTGGACTTAGAATTTGGCAACTAATATTTGTTCGTGAAAAGTTACACTGTTCGGTGAGGATATATATACACAACTGA

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Protein seq

MEEIIWEGSTDVVVTSLEHFKGSAFPYSRGDAATELLTSSMAKDGKPVQKEEGICPVKLLLLALIATRLLIFSHVVDGNSPVPVEAVEADIKDDDAARGHQLLRKATGEQVVGQVEVMPSHAQQSMPFRHDMAMPLSCDSPARNRRRELFSCSRHAMVELAMESSSNNKAAAARPEKGIPSLLLHRECGASFMISPITAVFGLRIWQLIFVREKLHCSVRIYIHN

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Gene Transcript Chromosome Start End Strand Source
OsIR64_02g0004190 OsIR64_02g0004190.01 Chr02 2955415 2955644 - NAM
CDS seq

ATGGTGATTACATTTGTGCAATCACCCAAGGATGATGGCAGCTCCCCAGATATGTTGTTGTTGTTCATAATCTGGTATTGTGCCACTGAATCTGTTCCACGCAAGATCAAGAAAAACCAGATTGCTGAGCTTTATCATGAGTACACCATCAATTGTTCCTTGCAAATCATTGTTAGGAAAAGAGAGGCACTCTAG

Protein seq

MVITFVQSPKDDGSSPDMLLLFIIWYCATESVPRKIKKNQIAELYHEYTINCSLQIIVRKREAL

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.000000 0.119308

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0155300 RBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db Os02g0155300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0004220 RBH 0.0 0.000000 1.197400
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0004400 RBH 0.0 0.0 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0004270 RBH 0.0 0.0 0.551299
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0004150 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0004190 RBH 1.013392 0.000000 0.000000
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0053000 SBH 1.2185155 0.6556885 0.2696535
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0004290 SBH 0.000000 0.314814 0.120547
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0055400 SBH 0.7668005 0.463171 2.2909955
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0004330 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0004070 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0004350 RBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0007630 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0004240 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G004150 RBH 0.0 0.0 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0004240 SBH 0.000000 0.000000 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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