Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_12g0019120 OGI:12064660 | 16/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr12:23858299-23864072
Gene Symbol ALDH12B1, OsALDH12B1
DNA seq

ttacacatgaagcaaattggcaacataccaagcatcagcataggaaatatctacagtttcactaactgcaagattttacacattatccatacattgtatccatcaccaaagagtcaaaaactacattgaacagcatatatagggtatttgtacattgttccttcagaagaagaacagcatatgatgctataaaatgctgaaatccatgaagaccagaggaacctatccaaaagaacatcccaacatttgccactgcccaccacgcaccaaaggagcacctgaagaagagcacaggatgtgcttcaaggtggaatgcagcaaatgtggcaagttcacctggaatggatgtggtaaacatgtcgcatccgtttacgactgtatcgagaaggggaaacattgtacttgcaagccatggccgggtgttgacacaaaggcagatggatccacttcgaaccccaaagaaggtgttagagacccactcaacaatgtaatttcagaaatagtagtgccaaatccaacacagggaacaaccaagtctattacaatagtggagtggttttgaggtggaagatggaaggatacaagggctagaaggttctagtagcttctagactagtagagaagaagggagatagaggagagatcgacaaagaggccagccagcctccaggtcgccgccaccgccgttcgccgccttggccaatcaatctgttcgtcccctcctggaagtgctgctactacttatatatggttgcctcttgggcttgcttggacttcttggaaagtagctgatccagcccatattgcagcccacatggctcctaacattctccttcccttgaaattcggcttgtccctaagccgatgactcgaagctgtgcaagcttcacccacttgatctcccctgttactatttctcttgtaatgtagccaatatgaccataggaaacacaaccagccaatgcttgtaatagcccacagtgaaagcctagttccttgtttaatagctaatgccaaatgagagccgcctggatcccatggaacactcaataaattgacaattactaagtttgcataaccatattgctgcaggaacataacaaccttcatgtccttgttaacagcaaatgcacacaaccaaagatcacgcttcttctgtaccactccactgactgaaaattctaaagtccaaactgtattgccttcatcctccattacatcaataagcagtctaggagcatcagcagcatggttttctttggcagtgatgatctcataatcacttggcttaatgcaatgtgctctcatgcaggtagttaattgacaattttctggttgtagagcgtagctaccaatctgacccatctcagcatctggatcccacactaatggcactaacagtacttgcatgagttccaatgggttcacaattagcatactgttcttgtattgtttagagttccaatcaagcaatccaccaaaagaccaaccattgtgcatgaatagaatagactgaggatagcacttctgaacactacaaccatacgaatcccggtcacagatcaattcaatgtaattgacctcttgaaccactatacccagtatattccaatcaaacacaacacctttcaagtctgtagcccatttctttgctacatgtgaagtcctagtgaaaatattttccatgtaaagtggtctcacaatatgcagtatggctattagtaaatggaatgtgctaattgcatttgggccatacaaccaacaacagccaatacagccttgtccaaggtgagtgtcaggtacagcaattgattgagccaaaaagtgtaccttatcttcaccaaagttttccaagaattttttagcaacttgagcttctatataagcttgatgatggctctttggagatatatcttggataagTttaacaaacaatcctggaataggccgcataatgctcaggtactgtttagaatcccaaccattcaacatcttcattttagccttagtggaccatatcctccttgacataagctgttgtgatatcatgcttactgaatgctgaaggagaccactcaagtgcagctcatatagcttaggaacaaacaatgaccattcttcacctaactcactccaaatcgctttccagaattttgaaattgcttttcgatccaccaggatatgggtgaagccattgatcaataagggcaggatgtcattctcatgtggtgggggccacagttccaactcagcccattcagttggtggtggccaaggatcaagtagatgttcttcaagccaacaatagatgaatgctggccagggcattggtcggaactccagtccgctaatcactccactgtaggttggaggtggccatggcttcaattcaatcccctccagccttagctttttactgaactgtgtcttgctgtcatatcgagggattctcaacaaacacccggtgggcgttggtatgtcctgcttgaggtcgctgaccaaccttgccgagaagatgtcaattgactcgatagatattggaacagacttggacacacccgacattgtcaggaacgcgcccccgacgtggtctgcgccacccttgacatcaaggcctaacatcgaacatttggtgtgcgtctccttgtgacagtcagggccatcaatttcagtggtgcaggcgacgtccttaccaacttccaggtccatggaggccagagaagtggaggtgcacgtaaccactgctgccacggtgaggtctaggatgttattggggttggagcaatttgtcaaacacttggcgggcgttaccatgggctgtacaggattgtagatgtaggttgcaccgattgcgtcctcagcaaataccagatcaatagaggtcatagaagtggtggcacacgtaacaaccacatcaacagcgagattgggctcgacattggggctgaagcattctgtcgaacacatagtgggcgtcatcttgtactgcttgtttccaaccaaaaaatgtgagtcttcagtgttattctgtacatggggaatccatgatgctaacgctgccttgagagattggaaatcagctctccttgtctgctctgcctccacccgccttcgttcaaactcctccattcgcctcaaaatcatatccaacttatgttcacttgccatggcagcttgcttggtgaactcagtggggattgttggctctgataccagattgttagagacccacccaacaatataatttcagaaatagcagtgccaaatctaacacagggaacaaccaagtctgttacaatagtggagtggttttgaggtggaagatggaaggatacaagggctagaaggttctagtagcttctagactagtagagaagaagggagatagaggagagatcgacaaagaggccagccagcctccaggtcaccgccgccgctattcgccgccttggccaatcaatctgttcgtcccctcctagaagtgctactgctacttatatatggttgcctcttgggcttgcttggacttctttggaaagtagctgatccagcccatattgcagcccacatggctcctaacagaaggttaattggcttggctgaacttctcacctctCctacatattaccatcatcttcaaaactgatagcgttatctgattggcaggtgaagcaaaagtttgagcttgcgcacatggatgactagttctgcagttttggtgatattagagtgaaggagacttcactttgatctaattatgtttgcctctctatccacctgtactggtttctgacttcaatgcaagttgaatttcaagaatccaataaaatattctgcagttaaataaaatttttgctttcctgaagatcccagttagggttgtgatataaagagagctggaaaacttcagcaaactctttaagcagggttctgtaggctttatcgatcaatgctgtttcgtctatctcttttccatcagatgctatttgcaatatctctttgatgctcccaacgccacgatcttttatgccgcagggaacaatgagttgaaatggtgttaactcagtggttacgttgagtgctagaccatgatatgctatccatcgtgagacatgaattcctattgctgcaactttcttatctcctaaaaagtaaatagaggggatatattagtaacacgtcattatatctcacagaaaattcAaaataatatcacaatttccaaaaggatagtaccataccaacccagacaccggttagaccttctaccctagatgccttgatggaaaatgcggactgaagggcacgaatgatcacctcttcaagtgatctaaagtaccaatgaaggtccatttgatgatatcgcaagttgataatcgggtacattacaagctaaggagacaataaaatgactgtcagaagcacagatattagctataaacgaatttcatgcaaagattgagtatccaataggaatagaagccacaatcttccgggaaaaccaggaTtttatcacatattttgataaccagattaaccacagctagggatatacatgaagtttaactaggtagaatacatcataaattgtagcaaaacaagccacaatcttctgccttagtgaaaatcaagatttcatcacattctggtaaccagattgcacagctaggcctatacttgaagttttaactatctatataactagatgtctagatgataatggagaaccatacagcttattcacaagtaaaagaaatgaaccacgattcgtgatatgtaacaatatgagcttcactgacattatggtacatacctgtccaggaccatgatatgtcacctccccaccacggtcaatacggtgaacctcaaaaggagcatctttaacatcgaaatggaggtagtcctcggtgctgtcagtgcctagcgtataaactggtggatgctgcagcgcgattaaggtgtcggagtgatcttcatccgtgcctaccaaccctttcctccttgtcacaatggactgctgccaagcccaagattccgcaaatggaacgaTGtgctgatggaggtcaaataactcacacctgttgaatacaaccacatagtcagaacaatcagtggcaagcaggcaacacaaTtttctagtagaatgccacaattctactacacatcaggttcaaattcagtttgctgcttcccaaaaaacagtgaagctttgagagttctaaagtttgtacagaacaactctttgagcaaaacaaagccatttgtggattgttcgtgctgatgaattcaaccgaatgaccagcaagaccggttaaatcaaatcataaaccagaaatacatcatcaactaatacaatcgaaacaacgacactgacacggtttcttccttcccatttggagcaataaattaggcattcgaaagaaactaggtatactaggagattcacggggcaccaaacctcctcctgctcacgccaccagcagcggagccggacaccagagcggcgtcccttggcgcggcgtggaagcatccggcgggtggtaggctgggccttctcccccgggagcgcggtggcggcgaggaggccgccctggagaccacggcggggaagggcagggcggcgcagtgggagccataggagcagggcaaggccatgcccgccctcctctcgcggtggggcggtgacttgtaggatggcgctgcgccggcagccagcggcggcgggcggagtcaccgaggaggcgaggaggagaaggccatggcggccgtctagc

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CDS seq

atgacctctattgatctggtatttgctgaggacgcaatcggtgcaacctacatctacaatcctgtacagcccatggtaacgcccgccaagtgtttgacaaattgctccaaccccaataacatcctagacctcaccgtggcagcagtggttacgtgcacctccacttctctggcctccatggacctggaagttggtaaggacgtcgcctgcaccactgaaattgatggccctgactgtcacaaggagacgcacaccaaatgttcgatgttaggccttgatgtcaagggtggcgcagaccacgtcgggggcgcgttcctgacaatgtcgggtgtgtccaagtctgttccaatatctatcgagtcaattgacatcttctcggcaaggttggtcagcgacctcaagcaggacataccaacgcccaccgggtgtttgttgagaatccctcgatatgacagcaagacacagttcagtaaaaagctaaggctggaggggattgaattgaagccatggccacctccaacctacagtggagtgattagcggactggagttccgaccaatgccctggccagcattcatctattgttggcttgaagaacatctacttgatccttggccaccaccaactgaatgggctgagttggaactgtggcccccaccacatgagaatgacatcctgcccttattgatcaatggcttcacccatatcctggtggatcgaaaagcaatttcaaaattctggaaagcgatttggagtgagttaggtgaagaatggtcattgtttgttcctaagctatatgagctgcacttgagtggtctccttcagcattcagtaagcatgatatcacaacagcttatgtcaaggaggatatggtccactaaggctaaaatgaagatgttgaatggttgggattctaaacagtacctgagcattatgcggcctattccaggattgtttgttaaActtatccaagatatatctccaaagagccatcatcaagcttatatagaagctcaagttgctaaaaaattcttggaaaactttggtgaagataaggtacactttttggctcaatcaattgctgtacctgacactcaccttggacaaggctgtattggctgttgttggttgtatggcccaaatgcaattagcacattccatttactaatagccatactgcatattgtgagaccactttacatggaaaatattttcactaggacttcacatgtagcaaagaaatgggctacagacttgaaaggtgttgtgtttgattggaatatactgggtatagtggttcaagaggtcaattacattgaattgatctgtgaccgggattcgtatggttgtagtgttcagaagtgctatcctcagtctattctattcatgcacaatggttggtcttttggtggattgcttgattggaactctaaacaatacaagaacagtatgctaattgtgaacccattggaactcatgcaagtactgttagtgccattagtgtgggatccagatgctgagatgggtcagattggtagctacgctctacaaccagaaaattgtcaattaactacctgcatgagagcacattgcattaagccaagtgattatgagatcatcactgccaaagaaaaccatgctgctgatgctcctagactgcttattgatgtaatggaggatgaaggcaatacagtttggactttagaattttcagtcagtggagtggtacagaagaagcgtgatctttggttgtgtgcatttgctgttaacaaggacatgaaggttgttatgttcctgcagcaatatggttatgcaaacttagtaattgtcaatttattgagtgttccatgggatccaggcggctctcatttggcattagctattaaacaaggaactaggctttcactgtgggctattacaagcattggctggttgtgtttcctatggtgctcctttggtgcgtggtgggcagtggcaaatgttgggatgttcttttggataggttcctctggtcttcatggatttcagcattttatagcatcatatgctgttcttcttctgaaggaacaatttagtgaaactgtagatatttcctatgctgatgcttggtatgttgccaatttgcttcatgtgtaa

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Protein seq

MTSIDLVFAEDAIGATYIYNPVQPMVTPAKCLTNCSNPNNILDLTVAAVVTCTSTSLASMDLEVGKDVACTTEIDGPDCHKETHTKCSMLGLDVKGGADHVGGAFLTMSGVSKSVPISIESIDIFSARLVSDLKQDIPTPTGCLLRIPRYDSKTQFSKKLRLEGIELKPWPPPTYSGVISGLEFRPMPWPAFIYCWLEEHLLDPWPPPTEWAELELWPPPHENDILPLLINGFTHILVDRKAISKFWKAIWSELGEEWSLFVPKLYELHLSGLLQHSVSMISQQLMSRRIWSTKAKMKMLNGWDSKQYLSIMRPIPGLFVKLIQDISPKSHHQAYIEAQVAKKFLENFGEDKVHFLAQSIAVPDTHLGQGCIGCCWLYGPNAISTFHLLIAILHIVRPLYMENIFTRTSHVAKKWATDLKGVVFDWNILGIVVQEVNYIELICDRDSYGCSVQKCYPQSILFMHNGWSFGGLLDWNSKQYKNSMLIVNPLELMQVLLVPLVWDPDAEMGQIGSYALQPENCQLTTCMRAHCIKPSDYEIITAKENHAADAPRLLIDVMEDEGNTVWTLEFSVSGVVQKKRDLWLCAFAVNKDMKVVMFLQQYGYANLVIVNLLSVPWDPGGSHLALAIKQGTRLSLWAITSIGWLCFLWCSFGAWWAVANVGMFFWIGSSGLHGFQHFIASYAVLLLKEQFSETVDISYADAWYVANLLHV

Function Probable aldehyde dehydrogenase [UniProtKB/Swiss-Prot:Q40255]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_12g0019120 OsGoSa_12g0019120.02 Chr12 23858299 23861184 - NAM
CDS seq

atgacctctattgatctggtatttgctgaggacgcaatcggtgcaacctacatctacaatcctgtacagcccatggtaacgcccgccaagtgtttgacaaattgctccaaccccaataacatcctagacctcaccgtggcagcagtggttacgtgcacctccacttctctggcctccatggacctggaagttggtaaggacgtcgcctgcaccactgaaattgatggccctgactgtcacaaggagacgcacaccaaatgttcgatgttaggccttgatgtcaagggtggcgcagaccacgtcgggggcgcgttcctgacaatgtcgggtgtgtccaagtctgttccaatatctatcgagtcaattgacatcttctcggcaaggttggtcagcgacctcaagcaggacataccaacgcccaccgggtgtttgttgagaatccctcgatatgacagcaagacacagttcagtaaaaagctaaggctggaggggattgaattgaagccatggccacctccaacctacagtggagtgattagcggactggagttccgaccaatgccctggccagcattcatctattgttggcttgaagaacatctacttgatccttggccaccaccaactgaatgggctgagttggaactgtggcccccaccacatgagaatgacatcctgcccttattgatcaatggcttcacccatatcctggtggatcgaaaagcaatttcaaaattctggaaagcgatttggagtgagttaggtgaagaatggtcattgtttgttcctaagctatatgagctgcacttgagtggtctccttcagcattcagtaagcatgatatcacaacagcttatgtcaaggaggatatggtccactaaggctaaaatgaagatgttgaatggttgggattctaaacagtacctgagcattatgcggcctattccaggattgtttgttaaActtatccaagatatatctccaaagagccatcatcaagcttatatagaagctcaagttgctaaaaaattcttggaaaactttggtgaagataaggtacactttttggctcaatcaattgctgtacctgacactcaccttggacaaggctgtattggctgttgttggttgtatggcccaaatgcaattagcacattccatttactaatagccatactgcatattgtgagaccactttacatggaaaatattttcactaggacttcacatgtagcaaagaaatgggctacagacttgaaaggtgttgtgtttgattggaatatactgggtatagtggttcaagaggtcaattacattgaattgatctgtgaccgggattcgtatggttgtagtgttcagaagtgctatcctcagtctattctattcatgcacaatggttggtcttttggtggattgcttgattggaactctaaacaatacaagaacagtatgctaattgtgaacccattggaactcatgcaagtactgttagtgccattagtgtgggatccagatgctgagatgggtcagattggtagctacgctctacaaccagaaaattgtcaattaactacctgcatgagagcacattgcattaagccaagtgattatgagatcatcactgccaaagaaaaccatgctgctgatgctcctagactgcttattgatgtaatggaggatgaaggcaatacagtttggactttagaattttcagtcagtggagtggtacagaagaagcgtgatctttggttgtgtgcatttgctgttaacaaggacatgaaggttgttatgttcctgcagcaatatggttatgcaaacttagtaattgtcaatttattgagtgttccatgggatccaggcggctctcatttggcattagctattaaacaaggaactaggctttcactgtgggctattacaagcattggctggttgtgtttcctatggtgctcctttggtgcgtggtgggcagtggcaaatgttgggatgttcttttggataggttcctctggtcttcatggatttcagcattttatagcatcatatgctgttcttcttctgaaggaacaatttagtgaaactgtagatatttcctatgctgatgcttggtatgttgccaatttgcttcatgtgtaa

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Protein seq

MTSIDLVFAEDAIGATYIYNPVQPMVTPAKCLTNCSNPNNILDLTVAAVVTCTSTSLASMDLEVGKDVACTTEIDGPDCHKETHTKCSMLGLDVKGGADHVGGAFLTMSGVSKSVPISIESIDIFSARLVSDLKQDIPTPTGCLLRIPRYDSKTQFSKKLRLEGIELKPWPPPTYSGVISGLEFRPMPWPAFIYCWLEEHLLDPWPPPTEWAELELWPPPHENDILPLLINGFTHILVDRKAISKFWKAIWSELGEEWSLFVPKLYELHLSGLLQHSVSMISQQLMSRRIWSTKAKMKMLNGWDSKQYLSIMRPIPGLFVKLIQDISPKSHHQAYIEAQVAKKFLENFGEDKVHFLAQSIAVPDTHLGQGCIGCCWLYGPNAISTFHLLIAILHIVRPLYMENIFTRTSHVAKKWATDLKGVVFDWNILGIVVQEVNYIELICDRDSYGCSVQKCYPQSILFMHNGWSFGGLLDWNSKQYKNSMLIVNPLELMQVLLVPLVWDPDAEMGQIGSYALQPENCQLTTCMRAHCIKPSDYEIITAKENHAADAPRLLIDVMEDEGNTVWTLEFSVSGVVQKKRDLWLCAFAVNKDMKVVMFLQQYGYANLVIVNLLSVPWDPGGSHLALAIKQGTRLSLWAITSIGWLCFLWCSFGAWWAVANVGMFFWIGSSGLHGFQHFIASYAVLLLKEQFSETVDISYADAWYVANLLHV

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Gene Transcript Chromosome Start End Strand Source
OsGoSa_12g0019120 OsGoSa_12g0019120.01 Chr12 23858358 23864072 - NAM
CDS seq

atggccttgccctgctcctatggctcccactgcgccgccctgcccttccccgccgtggtctccagggcggcctcctcgccgccaccgcgctcccgggggagaaggcccagcctaccacccgccggatgcttccacgccgcgccaagggacgccgctctggtgtccggctccgctgctggtggcgtgagcaggaggaggtgtgagttatttgacctccatcagcaCAtcgttccatttgcggaatcttgggcttggcagcagtccattgtgacaaggaggaaagggttggtaggcacggatgaagatcactccgacaccttaatcgcgctgcagcatccaccagtttatacgctaggcactgacagcaccgaggactacctccatttcgatgttaaagatgctccttttgaggttcaccgtattgaccgtggtggggaggtgacatatcatggtcctggacagcttgtaatgtacccgattatcaacttgcgatatcatcaaatggaccttcattggtactttagatcacttgaagaggtgatcattcgtgcccttcagtccgcattttccatcaaggcatctagggtagaaggtctaaccggtgtctgggttggagataagaaagttgcagcaataggaattcatgtctcacgatggatagcatatcatggtctagcactcaacgtaaccactgagttaacaccatttcaactcattgttccctgcggcataaaagatcgtggcgttgggagcatcaaagagatattgcaaatagcatctgatggaaaagagatagacgaaacagcattgatcgataaagcctacagaaccctgcttaaagagtttgctgaagttttccagctctctttatatcacaaccctaactgggatcttcaggaaagcaaaaattttatttaa

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Protein seq

MALPCSYGSHCAALPFPAVVSRAASSPPPRSRGRRPSLPPAGCFHAAPRDAALVSGSAAGGVSRRRCELFDLHQHIVPFAESWAWQQSIVTRRKGLVGTDEDHSDTLIALQHPPVYTLGTDSTEDYLHFDVKDAPFEVHRIDRGGEVTYHGPGQLVMYPIINLRYHQMDLHWYFRSLEEVIIRALQSAFSIKASRVEGLTGVWVGDKKVAAIGIHVSRWIAYHGLALNVTTELTPFQLIVPCGIKDRGVGSIKEILQIASDGKEIDETALIDKAYRTLLKEFAEVFQLSLYHNPNWDLQESKNFI

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 2.278904 11.002890 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g40440 RBH 0.290041 0.646969 0.454229
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0019490 RBH 0.484649 0.0 0.754110
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0019600 RBH 0.041735 0.000000 0.297891
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0019930 RBH 1.495912 2.017308 6.007031
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0019250 RBH 0.0 0.057063 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0018860 RBH 4.131951 7.532061 6.898933
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0333700 RBH 2.554034 6.5083365 4.4447485
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0018730 RBH 0.245922 0.458318 0.901623
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0363800 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0018970 RBH 0.077352 0.082969 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0019200 RBH 0.352914 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0019150 RBH 0.253935 0.0 0.365483
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_12g0019330 RBH 0.0 2.302420 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_12G018970 RBH 0.239696 1.359034 1.077144
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_12g0018660 RBH 1.016077 7.579648 6.121644
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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