Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_11g0023580 | OGI:11082520 | 4/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr11:30138988-30147288 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcaggcagcggcgagcgcctccacggggttgctggatgccgtcctccgcaagctgggcaagatgctcgccgacgaatacgagttacagacgggcgccaaggatggcatccggtacatccgggctgagctggagagcatgcaagcggcccttgcgaaggtgtcggaggtgccacctgaacagcttgacaaccaggtcaagctctgggcaaagaaggtgagggagacgtcctacagcatcgaggacaccatcgactccttcatgctacacgttggccatggtgatgctgatgacgagtccggaatctgtgcttgcgtgcggaccatatccatgctgccatggaggtataagtctcagcgcgacctcgccaccgagatcaagcgcataaaagaagaggttgacgaggtgggaaatcgtcgagagaggtataaacttgacagtattattgtggccacagccccgtctgatccccgcttgctagcactgtacgaagataaagcaaagctcgttggaattgatcactccacggaagagatcatcaagttgctatccatggaacgtgaaggtgatggtacatcggagcagaagctcaagttggtctcgatcgttggccctggtggaatggggaaaaccacccttgccaatgctgtgtatcaaaagcttgaagaaaaattcgattgcacagcttttgtttcggtttctcttcagcctgatgtcaagaatatcctcagcggcttgcttcgtcaagtcacggccagcaaagtcaaagatgacttggaggagggcaaggacaaggataagaagaggtacatcagttagattctttgtaaaatctccccctcctagtaaatcaccaacaaaatcgctgaatacactcaatactaattgcagcctacatcgtcgagaaagccaaaaacatgatggaaacacagaaacgtggtccgaaaaggagctcatcgacaaaatcagacatgtccttgagaaaagaaggtacgtcaattactgttgctatcttattataacaaagctatagttaattcataagggaacgtgttttagggacatcctctcgcttcttgtatgcatatcacctattaatcatccaaactttttaaaaataattgatgggataaattaatataaaacttcttaagagcaagtttaatagtatcgcccatcgcaggcggtaattgtttccaggtcatctagagttgatttgaaagctaacccatatacttcaagtaggagtaggctctaatacatctgtgcaccttttacagaaagtaggagtactctatttcctctctctctctctccagtatcttcctccctcacgctaagcttttctctgtccttgctaagttttcacctcgagacaagcgctagagccggcgacagaattgtcgctcgctcacgctctctctccttccctctttcctccagcgcagcaatacagtcgacgtggtattattatcgccggtacacactggtctattgtacccgctctaaggaattctctgtaaatgctgttactgttttcaactatactaccttttaggtagtatataatatcagacttgttcttcacaaaagaaggtacgtcatattactgttgctatcatttttatatcaaaaaagattattattgaaaagaaattgcaaaaaagaaaactcaatagattcgttctgactgactataaattacctctatattcgtttctcgatatcgtcatcagtttttagatctcctaggggcccctttgaatcacaggaatagaaaaacggaggaataggaaaaacataggattctgacaggaatgtaagtgtaaaacagaggaaaaacataggaatttgaggagagataaagactcaaagaattttttccatgaggttctacctcttgttaaaattcctccaaaacttgtatggaaagaggcattccataggaatttcataggatttcatagggttcattcctttaattcaaaaggctttgtaggaaaaaattcttatagaaatgaaatcctctaaaattcctatgaaattcctttgaatcaaagagggccttagtttttcatggtgatttcgagccgattttataagatccctttcctccaccaccactcgcctagtattctcccttttctccattctctctcattcctctcgcgaccaaccacttcataggtaggctgttctaggataggaggcagtggatcgatggggacgtggtcagcaccaacgacggtgccggcctcgcgcgggagcggcggatacgtcgccctcagactttgtagggtcagatccacggatggcgggcatgggggcgaggacaacgacaatactgaccttaagaacgacaaagacgacggtgccagccttgggagtgaccaatccggccacatccactgcctcgggaattgggaggggcggaaccaccatcgtcgggcacgagagcaacgacgatgtccacgacggcatcgggagggcccgtatccgctgtccgcgggcacgttagcgatgacaacaactgctgtagccccaggagtggcgacaacgatggcggccttgggagggctggatccactgctgacaggcacgggagcggcgtacgactgtggcagccttgggtggtccttggacgggcggatcctccgccactctgtggagcggcgacaacacccatgacaaccccggggaacgcatgcactactggcacagcttcgtgcaataggatctccctctatattagcatgaatttgtattctggagagagagcttgacatgggactttaatttgatgaccaaatgatatgtttttttgtattctctacaaaaccgttaaaacaacagcgcggaagcatgagcatgtagtgttgtcgatcgggtgtgccacaacggatcagttttctttatgtggatcattttgtcctggttcgcatggactagcaaagttagtgcaccaaaataagcattttgtaagatattgtatttattaatttgcactcatcttgtaagttcatgtatcatgggtataatatacttcttttagtaagatgaacaagctgggtggcccacgcaattgcgcggctagcacccatataaagttatctattttttaatatggttttacttaaaatttgttaaaatagctatttcgttgtctttagactttgaaagatcaacccttatcatcctaatgtttctaattttatagttcttaaaagtcacgccagtgctacccttacttctttgtcacaccttctttatttgcttccccgatctaccactgcttctatttattctccttgaaacatttaaaaactggatcttgtagtttttagagtttatggtctcattgggtttcgtttttataattttaatttagaagtcacgtcaaacgctaccaccgtactcctctatgacctgtccactgcctcatctcttaattgtcattagaatttaaaaattcgaacataattatcgtttggattcatgttttactttgtagaagtcctgccaaaccgtcaacggctttgccactatacttctctatggctaatcgaacatgattatcattgggtttattttttactttttagaagtccagccaaccgtcatgaccgtgttcatcatttcttcttttaatcgtcattaggattctatttagggttttgttaataattcttagatgttccatcaaccgccaacactctattcttttataggcctatcgtttctcccatattcattgttatttatcattgttgtattctagatgaacttttttctcttttttttgaaaatttcatatttttcattccgatattcttttatttataaattatattcctacctaaactcttatattttttctattttcagaatttattttaattgttagttggatggcccgcataattatgcagctaataccatacaaaattatctaatttttaatatggttttacttatcttaagacctagaaagatcaaaccttatcataccgtgtttccaattttatagtttataaagtcacaccagtagctaccccttatttatcactcctcctttattttcttcctcgttctatcgctgcgtctattcattctcattgaaatctttaaaaattggaccttataccttttatagtttattgactcgttgggtttcatttttatgatttttagaagtccagtcaaatgttgccaccagactcctctacggaccgtccactgccttttctctttattgtaattaagattttaaaaatcaaatataattatcgtttaggctcatttttttacttttgagaagccccaccaaaccgtcagtgactttgtctctatactcctctatggctcgcttgctgtcttcttctttattgtcatgtttgattttaaaaatctttattgtcatgtttgattttaaaaatcgaacatgattatcattttgtttacttttaagtccggccaaccactgtgatcgtgctactaaatagcatgtctgttgtccctccttttaatcgtcattgggatttttttgaggtcttgttaataggttttaaatgtcctttacaagcctattgcttctcccctctttgttgtcatttgtcatcattgtgttctaattttttttttctgaaaattctacatttgtcattccgatattgttttatttataaattatactcccacttgaacgcttataattatttttattttttagaatttattttatttgttattctgaattttaattaatcttttcttgtgtcatagatggtctcttttttcaatagttcttatttttgttatgatttttggtttttttataaattgtaatcctagttgaactcttatttttctttttgaatttcagaatttattttattttttcgaattttacttaatatcgtattgtgttttatatggactatttttttaatatttcttatttttattttcaatttgagttgatttaaaattgtattcctagttgaactcttttttatttttctaatttcagattttatttatttttattccaaattttaattgatctcgtattgagttcctatatgcactcttcttttcatattgctttattttaattccgaatttcagttatttttaaattttattcctactttaactcttattttctttttttttctaatgttggattttattttattttttaatccaaaatttaattaatctcgtattagattttttcatggactcttcttccaatattgcttatctttaattctgaaatttcagttactttctaattgtacttctacttgtactcttctttttcttttttccgattaatgtgaaaatttctagccccacagcgaatgtggtgtctcctttcaaaactgtcttaataatataatgagagaatcctttatataccactgaaaattgatctgatcccttatataccactaaaactacactacagtcggttaactgtgtgttgaccgtttattataaaataaaaagacgtatttgcctttctaagttgttaggcgtgtcctatactcagaatgacgatgatcgagtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaatcaacaacatcatatattaaatagtaattttacggtccttgagtatgcaccgtgaggtatcaaaaatttagtgtaaaatttggtacctcatggtacaaatttataataataaaagtggcacctcatgatatctccttaggaaccgtaaaattgcggaaagagatagtaactcttaacaattcgaagcaccatgtggttaattatttgatagtacgtccggtgagttctccggtccacatctcaacttgattgtagctcccaagttaattttgcgaactgataacacattacaaaaactgtaggtacttgattgtcattgatgatatatgggaagaacaaccatggaaacttatcaagtgtgctctctttgaaaacaaactcggcagtaaagtaatcacgacaactcgcaatactgaaattgcaaaattatgctctgctgacgaagttgatggtatcattcatcaactgcaacctctttcggatggtgactctgaacaactgttgtattacaaaatattcaagaatgaaggatgcccaaccgaattaaaggatgtgtcacagaaaatattaaagaagtgcaaaggctggccattagctatcaatgccatagctagtctacttgcaaacaaaccgacacaaactctgggtcagtggtatagtgtgttgaactcaattagtactggactcgagaataatcatggtgtgaaggacatgcggttgatattatctcttagctaccgtgatatgcctgcccagctaagagattgtcttttatatctaagcatattcccggaggaccatataattgggagagatgacttgatacagagatggatagctgaagatttagttcatggaagacaagatgactacctgtatgaattaggagacaagtactttaacgagcttattaataggagtatgatccaaccaatcgatgtggatgcctttgggagggcgcaagcttgtaaagtacacgatttggtacttgagtttatcagttttttgtcagctgaagaagccttcgtcacgatattcaatggcttgcagtcttttccacctcagctagacagcatacgtcggctatcccttcgaaacagagagggggagcacggcatacctaaggcaatcaaaaggttgcctcatgtgaggacacttgttgtatcctcatgttttttttattcaacgccttccctctccatttttccagttctacgtgtcttggaattacaacggtgcaccgaaagtaacatcaagggtgtggaaaacttggttcacttgaggtacctgaggctaactcaggcatactattttttttacgatggtgatgccgatcactgcattaaccttccagaaagaattggaaatttacagcttttgcagacactcgacctaaaggatgccatgataaaagaattgccacacacagtggttcagtttagccaactcagggtgctagagatttcacttcgtaaatttgacaagagatgcgaaacgcttttgctccagtgtttgtgcaatgtgaagcaactcgaagctctctgtatcaatgctccagatttatccttggatttcatgttgcaagtagattgggcccctacacacctccgaagatttacagcatctccccgtgagcagagtaaacatatgctcaggtctggatgggtagagttgagcccattctccagactgccaaggtggataaattcctcgctgctgctttctgacttatccatcatggtgaggacattagcgcaggaggatctggaaattcttgaagttcttcccgtacttcgttctgtggatttggaagtgatacaggccactggaacaaggctggaattcaatggaagtgtaggtggtaatggtcatgcaacagcattccagtgtctaggaaaccttaagtttgcaagtcgtgcggtggggctggtattcaaaccaggtgccgtgcaggagcttcagaagctatatctttgctttgatgttgcagagacgaaagatgttcatggtgacttcgattttcacagcttggagaatatcgcctcccttaagactctggacgtggatattgactgtcgctgtgccaggctctgggaagtagaggcggtagaggctgcattgtctaatgcaaccaagctgaatcccaactgtccaactcttggtttgacaaggcatttcccagatttgatactacatgatcaggaggaagagatccccgagcatctgcaagcaaagaagaaagaagacgtacgtactatactgatcttctgcaatctgtgttcgtttatttttgttctcattttcctcttctcctttctaatctcttgaattgtttgctctgtgctcaggctctactttctagggttgggccgtttggtggatatggggggagggcccgtgacatccgggtgacaccccaccgtctggaagacgtgacaattcacagtgccaacgtcgtacattcacttgcattttcatgcgctgatcataatgggcagcagcacagtacaggtccatggggtagccgtgatgcaagagtttcgacggtgagtaatttggccttaatttttcgtattcatgcttccaagttccaaccatattgcgtgggtgtttattatgctacccagtaa
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| CDS seq | atgcaggcagcggcgagcgcctccacggggttgctggatgccgtcctccgcaagctgggcaagatgctcgccgacgaatacgagttacagacgggcgccaaggatggcatccggtacatccgggctgagctggagagcatgcaagcggcccttgcgaaggtgtcggaggtgccacctgaacagcttgacaaccaggtcaagctctgggcaaagaaggtgagggagacgtcctacagcatcgaggacaccatcgactccttcatgctacacgttggccatggtgatgctgatgacgagtccggaatctgtgcttgcgtgcggaccatatccatgctgccatggaggtataagtctcagcgcgacctcgccaccgagatcaagcgcataaaagaagaggttgacgaggtgggaaatcgtcgagagaggtataaacttgacagtattattgtggccacagccccgtctgatccccgcttgctagcactgtacgaagataaagcaaagctcgttggaattgatcactccacggaagagatcatcaagttgctatccatggaacgtgaaggtgatggtacatcggagcagaagctcaagttggtctcgatcgttggccctggtggaatggggaaaaccacccttgccaatgctgtgtatcaaaagcttgaagaaaaattcgattgcacagcttttgtttcggtttctcttcagcctgatgtcaagaatatcctcagcggcttgcttcgtcaagtcacggccagcaaagtcaaagatgacttggaggagggcaaggacaaggataagaagagcctacatcgtcgagaaagccaaaaacatgatggaaacacagaaacgtggtccgaaaaggagctcatcgacaaaatcagacatgtccttgagaaaagaaggtacttgattgtcattgatgatatatgggaagaacaaccatggaaacttatcaagtgtgctctctttgaaaacaaactcggcagtaaagtaatcacgacaactcgcaatactgaaattgcaaaattatgctctgctgacgaagttgatggtatcattcatcaactgcaacctctttcggatggtgactctgaacaactgttgtattacaaaatattcaagaatgaaggatgcccaaccgaattaaaggatgtgtcacagaaaatattaaagaagtgcaaaggctggccattagctatcaatgccatagctagtctacttgcaaacaaaccgacacaaactctgggtcagtggtatagtgtgttgaactcaattagtactggactcgagaataatcatggtgtgaaggacatgcggttgatattatctcttagctaccgtgatatgcctgcccagctaagagattgtcttttatatctaagcatattcccggaggaccatataattgggagagatgacttgatacagagatggatagctgaagatttagttcatggaagacaagatgactacctgtatgaattaggagacaagtactttaacgagcttattaataggagtatgatccaaccaatcgatgtggatgcctttgggagggcgcaagcttgtaaagtacacgatttggtacttgagtttatcagttttttgtcagctgaagaagccttcgtcacgatattcaatggcttgcagtcttttccacctcagctagacagcatacgtcggctatcccttcgaaacagagagggggagcacggcatacctaaggcaatcaaaaggttgcctcatgtgaggacacttgttgtatcctcatgttttttttattcaacgccttccctctccatttttccagttctacgtgtcttggaattacaacggtgcaccgaaagtaacatcaagggtgtggaaaacttggttcacttgaggtacctgaggctaactcaggcatactattttttttacgatggtgatgccgatcactgcattaaccttccagaaagaattggaaatttacagcttttgcagacactcgacctaaaggatgccatgataaaagaattgccacacacagtggttcagtttagccaactcagggtgctagagatttcacttcgtaaatttgacaagagatgcgaaacgcttttgctccagtgtttgtgcaatgtgaagcaactcgaagctctctgtatcaatgctccagatttatccttggatttcatgttgcaagtagattgggcccctacacacctccgaagatttacagcatctccccgtgagcagagtaaacatatgctcaggtctggatgggtagagttgagcccattctccagactgccaaggtggataaattcctcgctgctgctttctgacttatccatcatggtgaggacattagcgcaggaggatctggaaattcttgaagttcttcccgtacttcgttctgtggatttggaagtgatacaggccactggaacaaggctggaattcaatggaagtgtaggtggtaatggtcatgcaacagcattccagtgtctaggaaaccttaagtttgcaagtcgtgcggtggggctggtattcaaaccaggtgccgtgcaggagcttcagaagctatatctttgctttgatgttgcagagacgaaagatgttcatggtgacttcgattttcacagcttggagaatatcgcctcccttaagactctggacgtggatattgactgtcgctgtgccaggctctgggaagtagaggcggtagaggctgcattgtctaatgcaaccaagctgaatcccaactgtccaactcttggtttgacaaggcatttcccagatttgatactacatgatcaggaggaagagatccccgagcatctgcaagcaaagaagaaagaagacgctctactttctagggttgggccgtttggtggatatggggggagggcccgtgacatccgggtgacaccccaccgtctggaagacgtgacaattcacagtgccaacgtcgtacattcacttgcattttcatgcgctgatcataatgggcagcagcacagtacaggtccatggggtagccgtgatgcaagagtttcgacggtgagtaatttggccttaatttttcgtattcatgcttccaagttccaaccatattgcgtgggtgtttattatgctacccagtaa
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| Protein seq | MQAAASASTGLLDAVLRKLGKMLADEYELQTGAKDGIRYIRAELESMQAALAKVSEVPPEQLDNQVKLWAKKVRETSYSIEDTIDSFMLHVGHGDADDESGICACVRTISMLPWRYKSQRDLATEIKRIKEEVDEVGNRRERYKLDSIIVATAPSDPRLLALYEDKAKLVGIDHSTEEIIKLLSMEREGDGTSEQKLKLVSIVGPGGMGKTTLANAVYQKLEEKFDCTAFVSVSLQPDVKNILSGLLRQVTASKVKDDLEEGKDKDKKSLHRRESQKHDGNTETWSEKELIDKIRHVLEKRRYLIVIDDIWEEQPWKLIKCALFENKLGSKVITTTRNTEIAKLCSADEVDGIIHQLQPLSDGDSEQLLYYKIFKNEGCPTELKDVSQKILKKCKGWPLAINAIASLLANKPTQTLGQWYSVLNSISTGLENNHGVKDMRLILSLSYRDMPAQLRDCLLYLSIFPEDHIIGRDDLIQRWIAEDLVHGRQDDYLYELGDKYFNELINRSMIQPIDVDAFGRAQACKVHDLVLEFISFLSAEEAFVTIFNGLQSFPPQLDSIRRLSLRNREGEHGIPKAIKRLPHVRTLVVSSCFFYSTPSLSIFPVLRVLELQRCTESNIKGVENLVHLRYLRLTQAYYFFYDGDADHCINLPERIGNLQLLQTLDLKDAMIKELPHTVVQFSQLRVLEISLRKFDKRCETLLLQCLCNVKQLEALCINAPDLSLDFMLQVDWAPTHLRRFTASPREQSKHMLRSGWVELSPFSRLPRWINSSLLLSDLSIMVRTLAQEDLEILEVLPVLRSVDLEVIQATGTRLEFNGSVGGNGHATAFQCLGNLKFASRAVGLVFKPGAVQELQKLYLCFDVAETKDVHGDFDFHSLENIASLKTLDVDIDCRCARLWEVEAVEAALSNATKLNPNCPTLGLTRHFPDLILHDQEEEIPEHLQAKKKEDALLSRVGPFGGYGGRARDIRVTPHRLEDVTIHSANVVHSLAFSCADHNGQQHSTGPWGSRDARVSTVSNLALIFRIHASKFQPYCVGVYYATQ |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:F7J0N2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_11g0023580 | OsGoSa_11g0023580.01 | Chr11 | 30138988 | 30147288 | + | NAM | ||
| CDS seq | atgcaggcagcggcgagcgcctccacggggttgctggatgccgtcctccgcaagctgggcaagatgctcgccgacgaatacgagttacagacgggcgccaaggatggcatccggtacatccgggctgagctggagagcatgcaagcggcccttgcgaaggtgtcggaggtgccacctgaacagcttgacaaccaggtcaagctctgggcaaagaaggtgagggagacgtcctacagcatcgaggacaccatcgactccttcatgctacacgttggccatggtgatgctgatgacgagtccggaatctgtgcttgcgtgcggaccatatccatgctgccatggaggtataagtctcagcgcgacctcgccaccgagatcaagcgcataaaagaagaggttgacgaggtgggaaatcgtcgagagaggtataaacttgacagtattattgtggccacagccccgtctgatccccgcttgctagcactgtacgaagataaagcaaagctcgttggaattgatcactccacggaagagatcatcaagttgctatccatggaacgtgaaggtgatggtacatcggagcagaagctcaagttggtctcgatcgttggccctggtggaatggggaaaaccacccttgccaatgctgtgtatcaaaagcttgaagaaaaattcgattgcacagcttttgtttcggtttctcttcagcctgatgtcaagaatatcctcagcggcttgcttcgtcaagtcacggccagcaaagtcaaagatgacttggaggagggcaaggacaaggataagaagagcctacatcgtcgagaaagccaaaaacatgatggaaacacagaaacgtggtccgaaaaggagctcatcgacaaaatcagacatgtccttgagaaaagaaggtacttgattgtcattgatgatatatgggaagaacaaccatggaaacttatcaagtgtgctctctttgaaaacaaactcggcagtaaagtaatcacgacaactcgcaatactgaaattgcaaaattatgctctgctgacgaagttgatggtatcattcatcaactgcaacctctttcggatggtgactctgaacaactgttgtattacaaaatattcaagaatgaaggatgcccaaccgaattaaaggatgtgtcacagaaaatattaaagaagtgcaaaggctggccattagctatcaatgccatagctagtctacttgcaaacaaaccgacacaaactctgggtcagtggtatagtgtgttgaactcaattagtactggactcgagaataatcatggtgtgaaggacatgcggttgatattatctcttagctaccgtgatatgcctgcccagctaagagattgtcttttatatctaagcatattcccggaggaccatataattgggagagatgacttgatacagagatggatagctgaagatttagttcatggaagacaagatgactacctgtatgaattaggagacaagtactttaacgagcttattaataggagtatgatccaaccaatcgatgtggatgcctttgggagggcgcaagcttgtaaagtacacgatttggtacttgagtttatcagttttttgtcagctgaagaagccttcgtcacgatattcaatggcttgcagtcttttccacctcagctagacagcatacgtcggctatcccttcgaaacagagagggggagcacggcatacctaaggcaatcaaaaggttgcctcatgtgaggacacttgttgtatcctcatgttttttttattcaacgccttccctctccatttttccagttctacgtgtcttggaattacaacggtgcaccgaaagtaacatcaagggtgtggaaaacttggttcacttgaggtacctgaggctaactcaggcatactattttttttacgatggtgatgccgatcactgcattaaccttccagaaagaattggaaatttacagcttttgcagacactcgacctaaaggatgccatgataaaagaattgccacacacagtggttcagtttagccaactcagggtgctagagatttcacttcgtaaatttgacaagagatgcgaaacgcttttgctccagtgtttgtgcaatgtgaagcaactcgaagctctctgtatcaatgctccagatttatccttggatttcatgttgcaagtagattgggcccctacacacctccgaagatttacagcatctccccgtgagcagagtaaacatatgctcaggtctggatgggtagagttgagcccattctccagactgccaaggtggataaattcctcgctgctgctttctgacttatccatcatggtgaggacattagcgcaggaggatctggaaattcttgaagttcttcccgtacttcgttctgtggatttggaagtgatacaggccactggaacaaggctggaattcaatggaagtgtaggtggtaatggtcatgcaacagcattccagtgtctaggaaaccttaagtttgcaagtcgtgcggtggggctggtattcaaaccaggtgccgtgcaggagcttcagaagctatatctttgctttgatgttgcagagacgaaagatgttcatggtgacttcgattttcacagcttggagaatatcgcctcccttaagactctggacgtggatattgactgtcgctgtgccaggctctgggaagtagaggcggtagaggctgcattgtctaatgcaaccaagctgaatcccaactgtccaactcttggtttgacaaggcatttcccagatttgatactacatgatcaggaggaagagatccccgagcatctgcaagcaaagaagaaagaagacgctctactttctagggttgggccgtttggtggatatggggggagggcccgtgacatccgggtgacaccccaccgtctggaagacgtgacaattcacagtgccaacgtcgtacattcacttgcattttcatgcgctgatcataatgggcagcagcacagtacaggtccatggggtagccgtgatgcaagagtttcgacggtgagtaatttggccttaatttttcgtattcatgcttccaagttccaaccatattgcgtgggtgtttattatgctacccagtaa
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| Protein seq | MQAAASASTGLLDAVLRKLGKMLADEYELQTGAKDGIRYIRAELESMQAALAKVSEVPPEQLDNQVKLWAKKVRETSYSIEDTIDSFMLHVGHGDADDESGICACVRTISMLPWRYKSQRDLATEIKRIKEEVDEVGNRRERYKLDSIIVATAPSDPRLLALYEDKAKLVGIDHSTEEIIKLLSMEREGDGTSEQKLKLVSIVGPGGMGKTTLANAVYQKLEEKFDCTAFVSVSLQPDVKNILSGLLRQVTASKVKDDLEEGKDKDKKSLHRRESQKHDGNTETWSEKELIDKIRHVLEKRRYLIVIDDIWEEQPWKLIKCALFENKLGSKVITTTRNTEIAKLCSADEVDGIIHQLQPLSDGDSEQLLYYKIFKNEGCPTELKDVSQKILKKCKGWPLAINAIASLLANKPTQTLGQWYSVLNSISTGLENNHGVKDMRLILSLSYRDMPAQLRDCLLYLSIFPEDHIIGRDDLIQRWIAEDLVHGRQDDYLYELGDKYFNELINRSMIQPIDVDAFGRAQACKVHDLVLEFISFLSAEEAFVTIFNGLQSFPPQLDSIRRLSLRNREGEHGIPKAIKRLPHVRTLVVSSCFFYSTPSLSIFPVLRVLELQRCTESNIKGVENLVHLRYLRLTQAYYFFYDGDADHCINLPERIGNLQLLQTLDLKDAMIKELPHTVVQFSQLRVLEISLRKFDKRCETLLLQCLCNVKQLEALCINAPDLSLDFMLQVDWAPTHLRRFTASPREQSKHMLRSGWVELSPFSRLPRWINSSLLLSDLSIMVRTLAQEDLEILEVLPVLRSVDLEVIQATGTRLEFNGSVGGNGHATAFQCLGNLKFASRAVGLVFKPGAVQELQKLYLCFDVAETKDVHGDFDFHSLENIASLKTLDVDIDCRCARLWEVEAVEAALSNATKLNPNCPTLGLTRHFPDLILHDQEEEIPEHLQAKKKEDALLSRVGPFGGYGGRARDIRVTPHRLEDVTIHSANVVHSLAFSCADHNGQQHSTGPWGSRDARVSTVSNLALIFRIHASKFQPYCVGVYYATQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0589800 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45924 | SBH | 0.620005 | 0.443831 | 0.108706 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0589800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0014590 | SBH | 0.131610 | 3.387070 | 3.701980 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0015590 | SBH | 0.079315 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0015520 | SBH | 0.0 | 0.0 | 2.668813 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023440 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0018760 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024280 | RBH | 0.0 | 0.051212 | 0.074088 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0443800 | SBH | 0 | 0 | 0.048555 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0015730 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0014710 | SBH | 0.604820 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0017270 | SBH | 0.983978 | 5.304365 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023380 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0015500 | SBH | 0.0 | 0.368261 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G018790 | SBH | 0.000000 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0019010 | SBH | 0.0 | 0.0 | 0.000000 |
