Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_11g0003150 OGI:11007120 | 16/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr11:2163850-2165001
Gene Symbol -
DNA seq

TTGTTCTGTTAGCATGCAAGTTGAGCATTGAATTTTTGCTACTGACAGGAAAGAACTCAGGTTAAATGTTTGATTTCACATAACCAAAAAAAAAAGCAATGGAGAGGCAGATGATCTGGTAAGAACAACTGAACTGatgggtgcagcactgcacaagatagtaatctttttatgacttcatccattcaggtatatacgcatatatccgttcaggtatatatgcgtaagaacaactgatgaggcagatttctctactattattgatagcgtacactatgcacacattaatttaatggtggaatagtcattgtcgttaaaacaattaacaacggcgcaatatcaccatcgttaaataaataacaaggacactatcgtggattctatattttgaagaaagtttcactcaaaagtgaatcagatatgaatcagtactgcaagaaataagtatgtcttgtcatatcaatttttttaccacgcaaagaaatattttatttaccgctctaatggatcgttggatgtattttgactgccttggccatctggtggtgttggtacggcacccatccaagctccatatggggaaacaaatgaattactctgcagtggaggtgctgtccaccaacctacgtcagaagcacaccatccattagttttctgttgatgacctattcactagaggctggaccaacggagacgacggcggaaagtgcgattttacttggaacagccatggcttcaccagacagagggaaggcgacgccgggcttcactacaccaccccaccaaggaacgccgggaggcaaagcttgaggcgttggaggagcaatctcccgcttggatctatggctcatcacttgaggtttgaggagatatgaggattagggatgagtttcaggaagactgagcgacaagcggtggatttatggattaggggcaaacttggcttgggtctaccgcgggaataagagggtgatttggcgcataaactacgcgggaagattagcagccatggggatttggcgccctggagaagaggagagcgcgcgaggaggaagacgcaggggcgtgcagggaacacccgatcccctttggcgagaaaatgcattgaatagcggcagcttgtgtcgatacggtgtcgttgcgagtctcgat

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CDS seq

atgagccatagatccaagcgggagattgctcctccaacgcctcaagctttgcctcccggcgttccttggtggggtggtgtagtgaagcccggcgtcgccttccctctgtctggtgaagccatggctgttccaagttggtggacagcacctccactgcagagtaattcatttgtttccccatatggagcttggatgggtgccgtaccaacaccaccagatggccaaggcagtcaaaatacatccaacgatccattagagcggtaa

Protein seq

MSHRSKREIAPPTPQALPPGVPWWGGVVKPGVAFPLSGEAMAVPSWWTAPPLQSNSFVSPYGAWMGAVPTPPDGQGSQNTSNDPLER

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_11g0003150 OsGoSa_11g0003150.01 Chr11 2163850 2165001 - NAM
CDS seq

atgagccatagatccaagcgggagattgctcctccaacgcctcaagctttgcctcccggcgttccttggtggggtggtgtagtgaagcccggcgtcgccttccctctgtctggtgaagccatggctgttccaagttggtggacagcacctccactgcagagtaattcatttgtttccccatatggagcttggatgggtgccgtaccaacaccaccagatggccaaggcagtcaaaatacatccaacgatccattagagcggtaa

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Protein seq

MSHRSKREIAPPTPQALPPGVPWWGGVVKPGVAFPLSGEAMAVPSWWTAPPLQSNSFVSPYGAWMGAVPTPPDGQGSQNTSNDPLER

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.000000 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0146950 RBH 3.086252 2.911127 4.315090
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db Os11g0146950 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0003160 RBH 0.555163 0.000000 5.482026
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0003220 RBH 0.318147 0.000000 0.355747
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0003160 RBH 1.298186 5.049746 7.830981
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0003090 RBH 0.186650 0.096413 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0003090 RBH 3.340966 11.312457 8.070008
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0040400 RBH 1.9824265 4.885026 4.777076
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0003160 RBH 0.0 0.000000 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0038600 RBH 4.1505725 5.885265 6.6665065
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0003040 RBH 0.153624 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0003170 RBH 0.000000 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0000490 RBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0003080 RBH 0.000000 0.0 0.751871
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0003170 RBH 0.000000 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G003150 RBH 0.000000 0.000000 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0003160 RBH 0.000000 0.000000 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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