Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_10g0012090 | OGI:10050220 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr10:17503042-17517795 | ||||||||
| Gene Symbol | CCX3, OsCCX3, OsNCX11, NCX11 | ||||||||||
| DNA seq | atggggaagggcggcggctgcgtccccagcaagaagcggcagccgccggccagcaccgtcgccggcgcgccgtcgtcgtcgtcggcgccgcgcgacgcccccgaggcggaggcgtcggcgtcggcgtcggcgtcgggggaggcggccggggggcggcggaggctgcggctgtacatcgtgttctactcgatgtacgggcacgtggaggcgctggcgcggcGggcggcggcgggcgtcgcggcggtggacggggtggaggcggtgctgcggcgcgtccccgagacgctcccgccgggcgtgctggagaagatgcaggcgccggccaaggaccccgccgtcccggtcatcgcggcggcggcggacctggaggaggccgacggggtgctgttcgggttcccgacgaggtacggctccatggccgcgcagatgaaggcgttcttcgactccaccggctccctctgggagaagcagaagctcgccgggaagcccgccgggttcttcgtcagcaccggcacgcagggaggcggccaggagaccaccgcgtaagcatctcatctgcttttcttcagaaatggattaattaagctgctaatcatatcatcTttatattagtgcttgctatcatggatagtagtgattgattctttaaagtggactggattagaccacttccttttccattcataagattatctagttcttgggataagaaatgacatatactaggtgttttagatgttgaactgaaccttgaatgctgttgtttctactcagttcAaatttgaacatacccctcatcagtggactgtttttttttttttgggttagtgctgagtgcttgcaaccactttgttggttggtgatatagcatatgttctgtattggcagtaatttaggcactaactgtttctcttcttctctttttttcccctttttggttcaatatcataggtttaattttttaattgttccttcactccaattttcagcatgatgcttgctgttgcactcaatctgtctctgttcagtgagcgtgtgcgtttacctctaggacagatttataagtcaaatatagtaggtgaGgatatctgagattgaaaggggttccaataaatatcagtcaaattgcacctatcttgaaaaatttcaagtaattcgccctgggggcatcagcaagttaatgtcacatcctaagatgtccttgtcatggtgcgttaccaattgtttggtagttccaaattgtggaaacgaggtcttattcttgtggctgttcaaaatccttacgcactacttcctcaataattaatagccatgattctgtactgtgagactattaacaacaaaggtagtgtggtcatggatgcatttatgaatagcaggatattgaagatgatttgtacaaaaagagatcttgatttaatgcacagcatgcatagcatcttgttctctagctgatcaggatctgctgtactccggctcaactcaggtgctgtcctaagcatttggatatgaaattcataaccaattgatggaggtagtgggtacaacacaatatttagtagtatctgtgaaaattttggatttatcattttcaaacccagttgggaattcagttcttgcctcgatcaaaatatttaatccacttcttacacaccaagtgtgaggaaaatagccattcatttgtttcaacccttcttgattttgagataaaaatgatgatcttcatcatggcatttggacatgtataAGaattagaagaTGtgtcacagttatagtactgttctttctgctcttttgccaggctatggttccttttattggtttatatgtctataccacccaacattttttttcaaagaagcattttaggttaatatttattttataatgaaagtttattgtggtggttttattactgctgagaaatggagaataccaacaaaaattctagagggagggagaggtatataggctttaatttggtggatctaagttaaaggcccagatatgatagttgtttatatattgattttctgaaagaaccacatctcaatcctgtcacttagggagatttcaaataagttggcactaattcaacagaatataatatcccaaatttagattccgtttgcagaagataattttaatacacttcacaatttgcacagggcaatcagctagtttactaagaataacatgtatactgctattttgcttctcagtttaagttggttttgaagtctatcttcaccctgctattgctgaccatgcttctctgttcattttagttggacggcaatcacccagatagtgcaccatggaatgctctttgtcccgattggctacaccttcgggtcaggcatgttcaagatggatgagatcagaggaggcagcccctatggcgctggcgtcttcgctggtgatggcggcagacagcccagcgagacggagctcgccctagccgagcaccagggcaagtacatggcctccatagtgaagaagcttgcccaggcttgagcctagaagaagttgaatcctCccacgccactgtgcagtccaaactccacacgatcgtccagtcgccattgatttccccctattggtttttcttcttctatatgtaatgtgcacagccTGAtgatcctcagatcgtcgtcgtatttgttcgtcacagatttatctgtaaattgctgacataaaacattgtttggtgtccagttgaacaataagtgtgccatacggtgttgatcgaaataacatacatcacttgccatagatttgttatgcagaactctgtttctgtatccagaactttgtttctgtatcatgaatgaagggaatgcacatgcttgtacagtttgtactgatgaatatcagtctgaatttctgatactgcacagtggagtggcgtcaggctatagcttgcaggttccaactggcggattcgaaggctgagccgccacctccagcgccgacgatcaccggccggcgaccagcagggtgctcgtcgtgacgttggcgcgaggcagtgttgcttcccttcagaaagcgtattcggagaatacgccgtgttgcctggagccttgaaggggtttatgtggcgaaaatacgtctcttcgcatagaaagcgtattaggagaatgcgtattatggctggtaggtggattcaaaattttgaaatttgccTttctgcaGggggggaaaccgcagcagcagcggggagagtttggtcgcctgaggtttttgcctcgccacgccggagtggctcgccgccgccgccgccgtggtggaaggagtccgttccggctcgtctcgccgtcgcgcccccctccgctggtacgagattctcagattccaccccctcccctcccatccccgtcccctggcggagctccaatcgcacgcgattgagggcggtgaattagttcgaggtagcgatcacaaggtaggggacgctcgctcttcgattagggtgcttctcctccgggccggcgactgggctcaccgacgagttctgcacccttagggttctaatgttgtgttcctatgagtttgattaggctttttgggggggggggggggggggggggggggctcgcttgtgcaggtgtagcgttggtgttccctggtgacccaaaatctgctgggtaattgatgcgatacctcctctgttatgccattagcgtgttgatttctggagtggaaggggggatgatgggtctctgatatggacttgtagaattgtgctacatatgtctgaacAAaaagttcTttgaacttggtggatttttccagaatgatttctggctgaaaactatcaaattggaaagattgtgcagtttggatagattttcctgggtctatacctttttcatctttatttattacacagggaaatcctataaggatgatcgatatttttgtttattccactatctgtttcagtgtcatcattgtacaggaaaagggcactgtctattgtatgtttacagcgtttagttgacatgtcgcacctacttttacaattttcatgcttctatgatagtcttggtatctaatttttctggtcatatctcctcacctgtgcataatttccaaatcttgttcatcataCaataaatgaattgatatggagtagtgaattctttgttgttgcaattgacttcaacagagcaaaacggaaccaatgatggacactctagagcttgcaagtgcaataccagaagctggagatgaggcatttcagattcaccgcttgaagcgatctgcatatgctgctgtgctgagagcgttctatgctcaaccagaccttctctcaggggtacttatttcatggatactttctttgtttgtacaagttcaattgcaaaatatcagtaaacaaatcatacataatatcagtaaacaggttcaattgtacaagttctatgctcaaccagactttctttgttttatcactcatcttgcattctgcatttttttaacgattgttttgttacaatgaattacctagaattacatagcttgatcagtgaatccaatctgagtaggttcacgtagccatgcgtcataattggataacacggcaccatggaataatatttgctttgaccattaccatatgtatattcttattgttcattatcttcaactcacaggccaaggaaggtagtcttgcaaaactgagaagtgaattcagaatatttgacaccgagcacagagaatatctaatgaaggctatctcaggaagtcagtctttgaggtgcgcaaatcaagtgttgtttcacagaatataaaatatatgctgatagaatgatcagtgagcttacctgctctacctttccagattcccaatatctcttttataTttgatagtattgaactcatatttctacggttgttttagtgttggaaatttcagatctccttgactgtgcaaacatttctcatactgtgacaagtaccacaaaacaaatcaactgatattgtgctgcatttcttgttgcagtgttggtttgaacaaagcaagcaTttgtaatattgaagttacaaaggattctctagatcttgtacccatgataacagatgctcaagatactgcatttcagattcactgcttggagcgatcagcatatgcttctgtgttaagagctttctttgctcagtcagaactcctctcacgggtataccgtatatgtatcatccacttatttctataagttagagtatgatatatcactatacaatgcagcttccattttatagaactttcagttcttagttttgggagaggtgtatgatgccacattttcttggtgctggagaaataggctcacattattgctcattccatactatctttcTtttgcgcatttatagtcattatactcttatggtgaattattttgatttattgtaactggcattgcttcatctttataaaatgttttttttaccttacagtcacaggccaagcttctcactgaactgaggaaaaaacttagaatatcagatgcggagcttagagaagttctcatgaatgtcacttcaaacgagtatatcaagtctttgcggtgagcatatctacttattgcctcccaggaaacaaaattcatgttgatcaatcagatgtctgtatttctttgcacttagcaggaattgtagtttggcaaataactctggtcttaaggatcctacTtttgatgcacgtgccatggttcctgataagctcgtcaaagatggacaaagcttcacctcattcacaaactgcatcagtttgtctcaggaatcacaaatatcaccgcgttcaatgctatctgtgaggtgattatgtttttgttttttattatttcacataagttaagattgctctgaaattaactaactgttggattttcagTtttctgaacaattttcacttatgaaacaggagtgttgacatattacgtagctctcacaggaccaaaaagggtccctgtctttatccccatgcaatagttcctgctaagaagtactctggaaatgagtacacattatcatacttaaaatcctctccagctgaacaattgccagttgcagtttcctctgtgcaggtggtatgtatcggttctttcttagtagctaacatcttaaactacaatatgagtggtattctggatttatggaattttttggctcttctttttcctgctagtaattattatctccggatgatgtcatgatgagcttaaTttcattaaaaaaaatatccacagtattcagaaggtaaccacaattgccaattggtaatatgcccattcgaactattgtggttatgtacttatgtggaactgtaaattatgaaaaaccttcccttttaatacctctgtggtttagtaaacagcttttgccacttctctgcctgtttttatggtaaaaactcagttaaagattttctttaaataaatcacttggcactgatgaaggttcgcttctaataatctagcattctagccctatgtgttgattataatttttgacagaaacgtagcacagatgatccgcttgatactaagacattaccttgtgaagtgaagactggctgcactctatctcccatccaattaaagcacatccaagcaaatgctggtcatgttcctttgtgtattcatcaagacatgaaagcatcaatgaaaaggaaaactgaagtgccagaagtgacaggatctaagagcttgactgtcatcgtgtcaactgccggaaacatagaacatgattttgacatcatgaagcttgacctaactgccaacctcctgagcaaggtacatgtatcatcctgagtattaaacattggacttggctctagatggtgaactcccctaaattatgatatctgactgcttactaactcttttaaatattcttttttccggtgatgtttcttagaaattaatttttctttgataatattatacCActtcctgtttagcattttctccctctctttgtgcttttatgccgtttaTttttaagttatatcaaggtatcaagctatttggttaaggtgtggctttattccattatttgtgtttttttccctctctttcatgtataccattcgaccttgtttgatctgcaatgtttgctactttaagaaagaagataaggagctctttgtattataatgagctttagattcacattctcattttacaggttgaacaactgtttagagaaaagccaaacccagatgatttagagacagcaaaggcgatactcaaggtgagaaccctcttgacttggataactcagtatgtaagcattggatttcatccaatctccgcttgttctaagcattatgtacttcaatgccatttaaacttgaaccaggaacaagaaaaggtccttttagatgcagtccttaagctttctgaagtatcatatgttggtgagtcgctttttgtatacttttttgttttctcatagcttagaatgttagttcttttaagaaaatattttagtatatcaactacactactttagggggttctgcagactcttttcctttttttaaccaaaaaaaatattgcatcaccatcataatatattcctaccaatgaactactggatgagtcctcttagaagttaccaaaactcttagatatatatttagttattgtgatccgtatttggcataatagaatgtgctatgagactgcaaatataacaatatttttccacctgaaaatattgaatttgatgaCCCTTATGAAGAACGGCATCCATCAAATCCCTCTGAAAACACTGGATTCACCATTTCTATTtttttctatcttcatcaaatccctctgaaaacattgaatagcaccgatttagctattccctccccattggaactgacatccttctctttgtcccatctactccgtagaggagtgtttcagcaccaactgccagccagatgagttcaaccagcactatgagtatgagagcgacgacgagatgccgcagaagacagcgagcacaaacgacgccgagacgccaccaaaaccggtgagcccaagcgacaaggaggcgcctccacagccagtgccaggacgtggtggtggcgccaccagcaagggtaaggcgaagccccgcgactccggccggagctccggcggtggcagcggatcaggcggccggctcgacgcagcggacgaccaacccacctccgcctccacctgcacatcatcaagcacactgtcgccgcgatcagaacgagagggggaagccaaagcccagcgcgcgcgcgggagggtgtttgaaccaccggccaagcgggcccggcgcccctccgtgaggctctcacggtcggaatggctctggtggtgaatgcgcgcgcgactgtgttcagctggaagCccccgcaatgtgaattcgcttgacaacaacatcatgactgaccatcaccaactctgctactgcacaatttgacagttttttgctggagacctctcacctctgatcaggtaaagtatagctctcgcctctgtccagcctcttaagctttaagcacaaagtggtacatagaacatagttaatgtaactagctagtcctttcttccatacacatataggtccatcggttgtcactttcaattatcaaaacacattttgagacagtttcatgttcccactaggttatacagtacctaaaaacatttcattactcactatctgctatgcacttgtggcatatttttttgtgctttgccatggattggaaacagtgataaaattgatggttttgatagtgtactgaattaggctgcattctcaggcagctttaagatgttgcctgctagtagcatagtactatccctgcactgcagttctggaaagtggtcgctggctgtgcccatgtgagtgaagatggtggtaatgcatgtgccttgtctatcccatgcaattctccctattcgagctgtagatatcatgccattaggtacagagactcgagtgaacagcattagatctgaaaaacttgcattggccttttataactgctcgcagctaccactggtcccggtcacaagtacttcatgttttttgttggtctgtccagctccagcatggttaaactgtacattcatcacggttttgtgatggctgagtggcttactcatgcaagatctagttatgcagagacagggattggtcttaactcttaaacaaagtgtatcatcatgatgtgatcgtcgtctaatcaataaaagcttccttcatactccctcagtttcgagcagtcgtttagtcattttcctagtcattttttaaaaaagtttgattaaatttatagaaaaatatagtagcatttccaacacaaaataaacacattattaaaatatactaaaagttaattaaactaatttggtgttgtaaatgttactaaaTttttttataaacttagtcatatctatctattatatactgaaagtccattaaacttcttacaaacgctctcaagctgccacgtggctttctcaaaacgcttttaagtcgtcacgtggcgcaacaagagagttgagaaccccctagggcccgcacgtgcagtgcatgggttatttccataacgtgaactaacgaagatagttcacgaagattagttccatatataactgtgtatgggaggcaagagattcgaaattaatttcaaagcaaaatctaatcacatatggcaagattaggcacgtgcagcgcatggatttgtcatgaataaacgaagattagttccataattgtgtacacaaggcaatatttcaaatctatctcaaagcaaagcttgcttagtttcatgaggcaagactacatatatatacaccggcttgcatacatatatgtacacctcaccagcaacacctttcaatccatctgcaacacacaattttggtggctccgtcctcctgtcctctgcaataagaggcctgcggcaatttggacgaatcacccttgcaataagaggtttgcggcaccagcccaatgactgacacccaatccattaattaagggaaatactttctcattccgtcccaaaatataagaatttaggattgaatatgatgtttcatagtacaacgcatctagatagactccctgtcatgatacattgtaataggaaacatctcattcaatcgtaggttattatatttgagacggaggaagtagataggacatagccactgaacaggaatcctaggttattataTttgagacggagggagtagataggacatagccaccggaaaggaaggagataaagagagcagggcaggcaggtcgacttaggagataactattttttcctgtacctattttttttcaccataaattcataaattctttcaccaagagaccaagtcataatgtaaaaaatcataataacaacaaaaaaaatgatattttaaataagatgcccgcgcaactgcgcaggctaccttcctagtttAaaaaaaaagtcaaacgacttataatataaaatgaaaggagtattaaaaaattagttgtttgaattgagaagatatcttgaagtatataaattttacgctaagaatgttaaaattacccttccttttaacttaggaaaatctctagtttacatgatcggatCccctaaaatcttgcacaggttcaacttacaccataaactgttaacatcttctactagaagtctagaaaacatcatgtagctaccaaaaccctgcaaatcacacctcgagcaaggtttggggatgcttttagccttttaggtgatttattagcacctatgcgtgataactgctgagagaatattgtctgtccttactccaaaggtgtgtttagttcacgccaaaattaaaagttttgttgaaattgaaacgatttgacggaaaagttgaaagtttatgtgtgtagaaaagttttgatgtgatggaaaagttgaaagtttaaagaaaaagtttgaaactgaactcggcccaagtggtctgaatattgtgtcaaaaaaaaaaggggaaaaaaaagaatgacgcggaggcagccaccagaccgctttaaatgcaatttacaccaaccaaatatccatggtgcaaattggaccagaccaataattgtgaaaccaaaaggaaaccgcttcgtgctgctctgcgtttttttaagcaagtttaggCcctgtttagttcgtggggagtaatccattactctctcctttttagtccctaggaatccaaataagggtgactaaaagtgtatattggaactaaaatccattagtctttccatagggactaggctgtgtttggaggtgggtgttaggaaccatctcccatacacagaaaacggagcgatccattaacacatgattaattaagtattagctaaTttttttttcaaaaatggatcaatataaatttttttaacaacttttgtatagaaactttttacaaaaaacgcatcatttagcagtttgaaaagcatgcacgtggaaaacgagagaggagtgttgaaaacttgctcttgcaaacacaccctaaagtggcagcctctctcttctctCcccctcggtccacgtgcctttagtcccttttagttcctagatccaaatagtaggtactaaaaagtttagtccaagaactaattttagtccagggaactaattttatcttcttaatatactagaaaaagtgtacgtgtgttacaacggaaaaactaaatcgtgacattttttatgcagtatttgagcattgtgaattgtgaaattgtctcacgtggctggttattgcattgcgatcgcttcattctgattatgaaaatctcacaaaaaaacataataggaatattccaaatacataaataatagaaataacatgaagatatgtctacatggttgtttatgcagcaacctttgaaaaatagccaagccatatcatctcatccatatcataatcggatcaggaagagcatgcagccggtgctagctgcgcttctttctaaactaataaagagagatttacgtatgcatagtattctagcacgaatcgatctgatgacctgttctcttcttctatacatgcaagcaaaaaattcgaaacagacatgtacatgtatttagactatttttatggtggttgaataggacacggatttgaacctggactaccgtattcatattcgaattggacgacgcaccaaacaatcagtaaaaacatcttcaatttttataatagtaaaaatgtttataaatagcttatagtttgctatctactgttttgtgatttgttcgaaattgtgctagttccaaccaaaatacacccaaaatatgttgacatcacacttcccaagttgatgctgtgcccccttaatcgcttgagctgtagcccccatatgatccaagcgtgatgcgtcgacgtcacgaaccaatctgcaagggacatccaaaggtgcaggctcacgtcctatcatgaattttgcctttgtcgtcctgcaaccatccaacccaatcttcatttttccttcacccaactcttcacttatccccgttctatcattttctttcatttcatatagtatatatcagtagagagaacagtaaaagttatcttcatggagtagtacacaccatttgacatcctgattatgtatagtaatttgaaacacggagatttcaagtggagttccgtagtcatttcatttgaaaatggttcggttcggccaaaattcggtgaatgtttgttgggggcttggagtgacgtttgctactactgacggattttcagtaatagcggtgatccgttttgtcggctacggtctgtgatcttcagcacgccactcgcgctgcgcccaccattatgcatggcaaagccttctgccacgtcggcggcggcggcgccgccggcggcgagggtgctgatcggtgccagcgtcaacgtggccttcttgctcctgctcgccttcttcttcttcatctcgccacgcggcggctcgccgccggaggtggtttcgtcgtcgaaggaggtcgggatccgggggcgtcgcgatggcggcggcggcggcggcggcggcgtgttccgggttgagagctacggggagaggtgcgagcacgtcggcgaggaggatggccttgatcgcctgcgattcccgcgtggctacgtcgactacctgtacctgttcgactgcgtgttcggcgaggagcggcgggttcttggctacgccgtgatggcggcgtggctcgccgtgctgttctacctgctcggcgacacggcggcggtgtacttctgctccagcctcgagggcctctcgcggctgctccgctctccccggcgatcgccggcgtgacgctcctgtcgctcgggaacggcgcgcccgacgcgctctccaccatcgcgtcgttcgcctccggcggcGggggGAGAGGGGGAGACCACCGCCGTGGGGCTCAACGGCGTGCTGGGGAGTGCGATGCTCGTGTCCTCCGCGGTGCTCGGCGTCATCGGCGTCCGCCTCGGCGCGCGCGGGGTCGCCGTGGACAGGGTGGACTTCTACCGCGACGCGTCTTTCCTCCTCGCCGCCCTCGCCGCCGTGGCCGTCGTCCTCGCCGCCGGCGAGGTGACAATCTGGGGCGCCCTCGCCTTCACCTCCCTCTACGTCGTCTACGTCGTCGTCGTCGCCTTCACCCACGGCCGCGCCCCGAGCAAAGGCCACGGCGCGGAGGCGGACCACACGGCGGACGCCTTCTCCGAGCTCTGCAACGTCGCAGAGACGAAGTTCTACGGCGACCAAGAACCACTCCTCCCCGACACTGCACCGCTACTCAGCTACTACCCCGGCGACGGCGACGGCGACGGAGGCGGCGGCGGCTCCAAGAAGAAGATCAGGAGCGCGTTCTGGTCGGTGTTGCGCGCGCTGGAGCTCCCACTATGGCTTCCACGGCGGCTGACCATCCCGGACGCGAGCAAGGAGCGGTGGAGCAAGCCGGCGGCGGTGACCGCGGTCACCATGGCGCCCGTCCTCCTCTCCCACCTCTGCAGCCGCGCCACCGGCATCACCTCGCCCCTCGCCGTCCTCCTCGGCGTCCTCGCCGGCGCGTCCCTCGGCGCCGTCGCCTTCTTCACCACCTCCCCGGACGCGCCCCCAGCCGACCACCTCGCCGCCTGGCTCGCCGCCGGGTTCGTCATGAGCGTGGCCTGGGCGTACGCCGTGGCGACCGAGCTCCTCGCGCTGCTGGTCTCCGCGGCGCACGTCATGGGCGTCGACTCGGCGgcgctggggctcaccgtgctcgcgtgggggaactccctgggcgacctcgtcgccaacctcgccgtggcgtcgcgcggcggcggcggcgggggcgcgcaggtggccgtggccgggtgctacggcgggccggtgttcgacgtgctcgtgggcctcggcgtgtcgatgttgctgtcgtcgtgggcctcgcatccgcggcccgtggcaatgccggcggaggccggcccattccagacgctgggcttcgccgccgcggggatttgctgggccgtggtggtgatgtccaggagagggatgagggtggacaggacgctggggtttgggctcctggccatttacttgtgctttctttgcatcaacatttctcaggcacttggaccagtatgaactttttttattttttttattcttttcataaggggcccggttggccaccattttgtgttggcccctccgcgcattgcaacggaaaTtttaagggaaatgttacaggacggtatacag
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| CDS seq | atggggaagggcggcggctgcgtccccagcaagaagcggcagccgccggccagcaccgtcgccggcgcgccgtcgtcgtcgtcggcgccgcgcgacgcccccgaggcggaggcgtcggcgtcggcgtcggcgtcgggggaggcggccggggggcggcggaggctgcggctgtacatcgtgttctactcgatgtacgggcacgtggaggcgctggcgcggcGggcggcggcgggcgtcgcggcggtggacggggtggaggcggtgctgcggcgcgtccccgagacgctcccgccgggcgtgctggagaagatgcaggcgccggccaaggaccccgccgtcccggtcatcgcggcggcggcggacctggaggaggccgacggggtgctgttcgggttcccgacgaggtacggctccatggccgcgcagatgaaggcgttcttcgactccaccggctccctctgggagaagcagaagctcgccgggaagcccgccgggttcttcgtcagcaccggcacgcagggaggcggccaggagaccaccgcttggacggcaatcacccagatagtgcaccatggaatgctctttgtcccgattggctacaccttcgggtcaggcatgttcaagatggatgagatcagaggaggcagcccctatggcgctggcgtcttcgctggtgatggcggcagacagcccagcgagacggagctcgccctagccgagcaccagggcaaaactctgtttctgtatccagaactttgtttctgtatcatgaatgaagggaatgcacatgcttgtacagtttgtactgatgaatatcagtctgaatttctgatactgcacagtggagtggcgtcaggctatagcttgcagggggggaaaccgcagcagcagcggggagagtttggtcgcctgaggtttttgcctcgccacgccggagtggctcgccgccgccgccgccgtggtggaaggagtccgttccggctcgtctcgccgtcgcgcccccctccgctgagcaaaacggaaccaatgatggacactctagagcttgcaagtgcaataccagaagctggagatgaggcatttcagattcaccgcttgaagcgatctgcatatgctgctgtgctgagagcgttctatgctcaaccagaccttctctcaggggccaaggaaggtagtcttgcaaaactgagaagtgaattcagaatatttgacaccgagcacagagaatatctaatgaaggctatctcaggaagtcagtctttgagtgttggtttgaacaaagcaagcaTttgtaatattgaagttacaaaggattctctagatcttgtacccatgataacagatgctcaagatactgcatttcagattcactgcttggagcgatcagcatatgcttctgtgttaagagctttctttgctcagtcagaactcctctcacggtcacaggccaagcttctcactgaactgaggaaaaaacttagaatatcagatgcggagcttagagaagttctcatgaatgtcacttcaaacgagtatatcaagtctttgcggaattgtagtttggcaaataactctggtcttaaggatcctacTtttgatgcacgtgccatggttcctgataagctcgtcaaagatggacaaagcttcacctcattcacaaactgcatcagtttgtctcaggaatcacaaatatcaccgcgttcaatgctatctgtgaggagtgttgacatattacgtagctctcacaggaccaaaaagggtccctgtctttatccccatgcaatagttcctgctaagaagtactctggaaatgagtacacattatcatacttaaaatcctctccagctgaacaattgccagttgcagtttcctctgtgcaggtgaaacgtagcacagatgatccgcttgatactaagacattaccttgtgaagtgaagactggctgcactctatctcccatccaattaaagcacatccaagcaaatgctggtcatgttcctttgtgtattcatcaagacatgaaagcatcaatgaaaaggaaaactgaagtgccagaagtgacaggatctaagagcttgactgtcatcgtgtcaactgccggaaacatagaacatgattttgacatcatgaagcttgacctaactgccaacctcctgagcaaggttgaacaactgtttagagaaaagccaaacccagatgatttagagacagcaaaggcgatactcaaggaacaagaaaaggtccttttagatgcagtccttaagctttctgaagtatcatatgttgaggagtgtttcagcaccaactgccagccagatgagttcaaccagcactatgagtatgagagcgacgacgagatgccgcagaagacagcgagcacaaacgacgccgagacgccaccaaaaccggtgagcccaagcgacaaggaggcgcctccacagccagtgccaggacgtggtggtggcgccaccagcaaggttttttgctggagacctctcacctctgatcaggctgcattctcaggcagctttaagatgttgcctgctagtagcatagtactatccctgcactgcagttctggaaagtggtcgctggctgtgcccattaatagcggtgatccgttttgtcggctacggtctgtgatcttcagcacgccactcgcgctgcgcccaccattatgcatggcaaagccttctgccacgtcggcggcggcggcgccgccggcggcgagggtgctgatcggtgccagcgtcaacgtggccttcttgctcctgctcgccttcttcttcttcatctcgccacgcggcggctcgccgccggaggtggtttcgtcgtcgaaggaggtcgggatccgggggcgtcgcgatggcggcggcggcggcggcggcggcgtgttccgggttgagagctacggggagaggtgcgagcacgtcggcgaggaggatggccttgatcgcctgcgattcccgcgtggctacgtcgactacctgtacctgttcgactgcgtgttcggcgaggagcggcgggttcttggctacgccgtgatggcggcgtggctcgccgtgctgttctacctgctcggcgacacggcggcgGGGGAGACCACCGCCGTGGGGCTCAACGGCGTGCTGGGGAGTGCGATGCTCGTGTCCTCCGCGGTGCTCGGCGTCATCGGCGTCCGCCTCGGCGCGCGCGGGGTCGCCGTGGACAGGGTGGACTTCTACCGCGACGCGTCTTTCCTCCTCGCCGCCCTCGCCGCCGTGGCCGTCGTCCTCGCCGCCGGCGAGGTGACAATCTGGGGCGCCCTCGCCTTCACCTCCCTCTACGTCGTCTACGTCGTCGTCGTCGCCTTCACCCACGGCCGCGCCCCGAGCAAAGGCCACGGCGCGGAGGCGGACCACACGGCGGACGCCTTCTCCGAGCTCTGCAACGTCGCAGAGACGAAGTTCTACGGCGACCAAGAACCACTCCTCCCCGACACTGCACCGCTACTCAGCTACTACCCCGGCGACGGCGACGGCGACGGAGGCGGCGGCGGCTCCAAGAAGAAGATCAGGAGCGCGTTCTGGTCGGTGTTGCGCGCGCTGGAGCTCCCACTATGGCTTCCACGGCGGCTGACCATCCCGGACGCGAGCAAGGAGCGGTGGAGCAAGCCGGCGGCGGTGACCGCGGTCACCATGGCGCCCGTCCTCCTCTCCCACCTCTGCAGCCGCGCCACCGGCATCACCTCGCCCCTCGCCGTCCTCCTCGGCGTCCTCGCCGGCGCGTCCCTCGGCGCCGTCGCCTTCTTCACCACCTCCCCGGACGCGCCCCCAGCCGACCACCTCGCCGCCTGGCTCGCCGCCGGGTTCGTCATGAGCGTGGCCTGGGCGTACGCCGTGGCGACCGAGCTCCTCGCGCTGCTGGTCTCCGCGGCGCACGTCATGGGCGTCGACTCGGCGgcgctggggctcaccgtgctcgcgtgggggaactccctgggcgacctcgtcgccaacctcgccgtggcgtcgcgcggcggcggcggcgggggcgcgcaggtggccgtggccgggtgctacggcgggccggtgttcgacgtgctcgtgggcctcggcgtgtcgatgttgctgtcgtcgtgggcctcgcatccgcggcccgtggcaatgccggcggaggccggcccattccagacgctgggcttcgccgccgcggggatttgctgggccgtggtggtgatgtccaggagagggatgagggtggacaggacgctggggtttgggctcctggccatttacttgtgctttctttgcatcaacatttctcaggcacttggaccagtatga
More
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| Protein seq | MGKGGGCVPSKKRQPPASTVAGAPSSSSAPRDAPEAEASASASASGEAAGGRRRLRLYIVFYSMYGHVEALARRAAAGVAAVDGVEAVLRRVPETLPPGVLEKMQAPAKDPAVPVIAAAADLEEADGVLFGFPTRYGSMAAQMKAFFDSTGSLWEKQKLAGKPAGFFVSTGTQGGGQETTAWTAITQIVHHGMLFVPIGYTFGSGMFKMDEIRGGSPYGAGVFAGDGGRQPSETELALAEHQGKTLFLYPELCFCIMNEGNAHACTVCTDEYQSEFLILHSGVASGYSLQGGKPQQQRGEFGRLRFLPRHAGVARRRRRRGGRSPFRLVSPSRPPPLSKTEPMMDTLELASAIPEAGDEAFQIHRLKRSAYAAVLRAFYAQPDLLSGAKEGSLAKLRSEFRIFDTEHREYLMKAISGSQSLSVGLNKASICNIEVTKDSLDLVPMITDAQDTAFQIHCLERSAYASVLRAFFAQSELLSRSQAKLLTELRKKLRISDAELREVLMNVTSNEYIKSLRNCSLANNSGLKDPTFDARAMVPDKLVKDGQSFTSFTNCISLSQESQISPRSMLSVRSVDILRSSHRTKKGPCLYPHAIVPAKKYSGNEYTLSYLKSSPAEQLPVAVSSVQVKRSTDDPLDTKTLPCEVKTGCTLSPIQLKHIQANAGHVPLCIHQDMKASMKRKTEVPEVTGSKSLTVIVSTAGNIEHDFDIMKLDLTANLLSKVEQLFREKPNPDDLETAKAILKEQEKVLLDAVLKLSEVSYVEECFSTNCQPDEFNQHYEYESDDEMPQKTASTNDAETPPKPVSPSDKEAPPQPVPGRGGGATSKVFCWRPLTSDQAAFSGSFKMLPASSIVLSLHCSSGKWSLAVPINSGDPFCRLRSVIFSTPLALRPPLCMAKPSATSAAAAPPAARVLIGASVNVAFLLLLAFFFFISPRGGSPPEVVSSSKEVGIRGRRDGGGGGGGGVFRVESYGERCEHVGEEDGLDRLRFPRGYVDYLYLFDCVFGEERRVLGYAVMAAWLAVLFYLLGDTAAGETTAVGLNGVLGSAMLVSSAVLGVIGVRLGARGVAVDRVDFYRDASFLLAALAAVAVVLAAGEVTIWGALAFTSLYVVYVVVVAFTHGRAPSKGHGAEADHTADAFSELCNVAETKFYGDQEPLLPDTAPLLSYYPGDGDGDGGGGGSKKKIRSAFWSVLRALELPLWLPRRLTIPDASKERWSKPAAVTAVTMAPVLLSHLCSRATGITSPLAVLLGVLAGASLGAVAFFTTSPDAPPADHLAAWLAAGFVMSVAWAYAVATELLALLVSAAHVMGVDSAALGLTVLAWGNSLGDLVANLAVASRGGGGGGAQVAVAGCYGGPVFDVLVGLGVSMLLSSWASHPRPVAMPAEAGPFQTLGFAAAGICWAVVVMSRRGMRVDRTLGFGLLAIYLCFLCINISQALGPV |
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| Function | Cation/calcium exchanger 1 [UniProtKB/Swiss-Prot:Q9FKP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_10g0012090 | OsGoSa_10g0012090.01 | Chr10 | 17503042 | 17517795 | + | NAM | ||
| CDS seq | atggggaagggcggcggctgcgtccccagcaagaagcggcagccgccggccagcaccgtcgccggcgcgccgtcgtcgtcgtcggcgccgcgcgacgcccccgaggcggaggcgtcggcgtcggcgtcggcgtcgggggaggcggccggggggcggcggaggctgcggctgtacatcgtgttctactcgatgtacgggcacgtggaggcgctggcgcggcGggcggcggcgggcgtcgcggcggtggacggggtggaggcggtgctgcggcgcgtccccgagacgctcccgccgggcgtgctggagaagatgcaggcgccggccaaggaccccgccgtcccggtcatcgcggcggcggcggacctggaggaggccgacggggtgctgttcgggttcccgacgaggtacggctccatggccgcgcagatgaaggcgttcttcgactccaccggctccctctgggagaagcagaagctcgccgggaagcccgccgggttcttcgtcagcaccggcacgcagggaggcggccaggagaccaccgcttggacggcaatcacccagatagtgcaccatggaatgctctttgtcccgattggctacaccttcgggtcaggcatgttcaagatggatgagatcagaggaggcagcccctatggcgctggcgtcttcgctggtgatggcggcagacagcccagcgagacggagctcgccctagccgagcaccagggcaaaactctgtttctgtatccagaactttgtttctgtatcatgaatgaagggaatgcacatgcttgtacagtttgtactgatgaatatcagtctgaatttctgatactgcacagtggagtggcgtcaggctatagcttgcagggggggaaaccgcagcagcagcggggagagtttggtcgcctgaggtttttgcctcgccacgccggagtggctcgccgccgccgccgccgtggtggaaggagtccgttccggctcgtctcgccgtcgcgcccccctccgctgagcaaaacggaaccaatgatggacactctagagcttgcaagtgcaataccagaagctggagatgaggcatttcagattcaccgcttgaagcgatctgcatatgctgctgtgctgagagcgttctatgctcaaccagaccttctctcaggggccaaggaaggtagtcttgcaaaactgagaagtgaattcagaatatttgacaccgagcacagagaatatctaatgaaggctatctcaggaagtcagtctttgagtgttggtttgaacaaagcaagcaTttgtaatattgaagttacaaaggattctctagatcttgtacccatgataacagatgctcaagatactgcatttcagattcactgcttggagcgatcagcatatgcttctgtgttaagagctttctttgctcagtcagaactcctctcacggtcacaggccaagcttctcactgaactgaggaaaaaacttagaatatcagatgcggagcttagagaagttctcatgaatgtcacttcaaacgagtatatcaagtctttgcggaattgtagtttggcaaataactctggtcttaaggatcctacTtttgatgcacgtgccatggttcctgataagctcgtcaaagatggacaaagcttcacctcattcacaaactgcatcagtttgtctcaggaatcacaaatatcaccgcgttcaatgctatctgtgaggagtgttgacatattacgtagctctcacaggaccaaaaagggtccctgtctttatccccatgcaatagttcctgctaagaagtactctggaaatgagtacacattatcatacttaaaatcctctccagctgaacaattgccagttgcagtttcctctgtgcaggtgaaacgtagcacagatgatccgcttgatactaagacattaccttgtgaagtgaagactggctgcactctatctcccatccaattaaagcacatccaagcaaatgctggtcatgttcctttgtgtattcatcaagacatgaaagcatcaatgaaaaggaaaactgaagtgccagaagtgacaggatctaagagcttgactgtcatcgtgtcaactgccggaaacatagaacatgattttgacatcatgaagcttgacctaactgccaacctcctgagcaaggttgaacaactgtttagagaaaagccaaacccagatgatttagagacagcaaaggcgatactcaaggaacaagaaaaggtccttttagatgcagtccttaagctttctgaagtatcatatgttgaggagtgtttcagcaccaactgccagccagatgagttcaaccagcactatgagtatgagagcgacgacgagatgccgcagaagacagcgagcacaaacgacgccgagacgccaccaaaaccggtgagcccaagcgacaaggaggcgcctccacagccagtgccaggacgtggtggtggcgccaccagcaaggttttttgctggagacctctcacctctgatcaggctgcattctcaggcagctttaagatgttgcctgctagtagcatagtactatccctgcactgcagttctggaaagtggtcgctggctgtgcccattaatagcggtgatccgttttgtcggctacggtctgtgatcttcagcacgccactcgcgctgcgcccaccattatgcatggcaaagccttctgccacgtcggcggcggcggcgccgccggcggcgagggtgctgatcggtgccagcgtcaacgtggccttcttgctcctgctcgccttcttcttcttcatctcgccacgcggcggctcgccgccggaggtggtttcgtcgtcgaaggaggtcgggatccgggggcgtcgcgatggcggcggcggcggcggcggcggcgtgttccgggttgagagctacggggagaggtgcgagcacgtcggcgaggaggatggccttgatcgcctgcgattcccgcgtggctacgtcgactacctgtacctgttcgactgcgtgttcggcgaggagcggcgggttcttggctacgccgtgatggcggcgtggctcgccgtgctgttctacctgctcggcgacacggcggcgGGGGAGACCACCGCCGTGGGGCTCAACGGCGTGCTGGGGAGTGCGATGCTCGTGTCCTCCGCGGTGCTCGGCGTCATCGGCGTCCGCCTCGGCGCGCGCGGGGTCGCCGTGGACAGGGTGGACTTCTACCGCGACGCGTCTTTCCTCCTCGCCGCCCTCGCCGCCGTGGCCGTCGTCCTCGCCGCCGGCGAGGTGACAATCTGGGGCGCCCTCGCCTTCACCTCCCTCTACGTCGTCTACGTCGTCGTCGTCGCCTTCACCCACGGCCGCGCCCCGAGCAAAGGCCACGGCGCGGAGGCGGACCACACGGCGGACGCCTTCTCCGAGCTCTGCAACGTCGCAGAGACGAAGTTCTACGGCGACCAAGAACCACTCCTCCCCGACACTGCACCGCTACTCAGCTACTACCCCGGCGACGGCGACGGCGACGGAGGCGGCGGCGGCTCCAAGAAGAAGATCAGGAGCGCGTTCTGGTCGGTGTTGCGCGCGCTGGAGCTCCCACTATGGCTTCCACGGCGGCTGACCATCCCGGACGCGAGCAAGGAGCGGTGGAGCAAGCCGGCGGCGGTGACCGCGGTCACCATGGCGCCCGTCCTCCTCTCCCACCTCTGCAGCCGCGCCACCGGCATCACCTCGCCCCTCGCCGTCCTCCTCGGCGTCCTCGCCGGCGCGTCCCTCGGCGCCGTCGCCTTCTTCACCACCTCCCCGGACGCGCCCCCAGCCGACCACCTCGCCGCCTGGCTCGCCGCCGGGTTCGTCATGAGCGTGGCCTGGGCGTACGCCGTGGCGACCGAGCTCCTCGCGCTGCTGGTCTCCGCGGCGCACGTCATGGGCGTCGACTCGGCGgcgctggggctcaccgtgctcgcgtgggggaactccctgggcgacctcgtcgccaacctcgccgtggcgtcgcgcggcggcggcggcgggggcgcgcaggtggccgtggccgggtgctacggcgggccggtgttcgacgtgctcgtgggcctcggcgtgtcgatgttgctgtcgtcgtgggcctcgcatccgcggcccgtggcaatgccggcggaggccggcccattccagacgctgggcttcgccgccgcggggatttgctgggccgtggtggtgatgtccaggagagggatgagggtggacaggacgctggggtttgggctcctggccatttacttgtgctttctttgcatcaacatttctcaggcacttggaccagtatga
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| Protein seq | MGKGGGCVPSKKRQPPASTVAGAPSSSSAPRDAPEAEASASASASGEAAGGRRRLRLYIVFYSMYGHVEALARRAAAGVAAVDGVEAVLRRVPETLPPGVLEKMQAPAKDPAVPVIAAAADLEEADGVLFGFPTRYGSMAAQMKAFFDSTGSLWEKQKLAGKPAGFFVSTGTQGGGQETTAWTAITQIVHHGMLFVPIGYTFGSGMFKMDEIRGGSPYGAGVFAGDGGRQPSETELALAEHQGKTLFLYPELCFCIMNEGNAHACTVCTDEYQSEFLILHSGVASGYSLQGGKPQQQRGEFGRLRFLPRHAGVARRRRRRGGRSPFRLVSPSRPPPLSKTEPMMDTLELASAIPEAGDEAFQIHRLKRSAYAAVLRAFYAQPDLLSGAKEGSLAKLRSEFRIFDTEHREYLMKAISGSQSLSVGLNKASICNIEVTKDSLDLVPMITDAQDTAFQIHCLERSAYASVLRAFFAQSELLSRSQAKLLTELRKKLRISDAELREVLMNVTSNEYIKSLRNCSLANNSGLKDPTFDARAMVPDKLVKDGQSFTSFTNCISLSQESQISPRSMLSVRSVDILRSSHRTKKGPCLYPHAIVPAKKYSGNEYTLSYLKSSPAEQLPVAVSSVQVKRSTDDPLDTKTLPCEVKTGCTLSPIQLKHIQANAGHVPLCIHQDMKASMKRKTEVPEVTGSKSLTVIVSTAGNIEHDFDIMKLDLTANLLSKVEQLFREKPNPDDLETAKAILKEQEKVLLDAVLKLSEVSYVEECFSTNCQPDEFNQHYEYESDDEMPQKTASTNDAETPPKPVSPSDKEAPPQPVPGRGGGATSKVFCWRPLTSDQAAFSGSFKMLPASSIVLSLHCSSGKWSLAVPINSGDPFCRLRSVIFSTPLALRPPLCMAKPSATSAAAAPPAARVLIGASVNVAFLLLLAFFFFISPRGGSPPEVVSSSKEVGIRGRRDGGGGGGGGVFRVESYGERCEHVGEEDGLDRLRFPRGYVDYLYLFDCVFGEERRVLGYAVMAAWLAVLFYLLGDTAAGETTAVGLNGVLGSAMLVSSAVLGVIGVRLGARGVAVDRVDFYRDASFLLAALAAVAVVLAAGEVTIWGALAFTSLYVVYVVVVAFTHGRAPSKGHGAEADHTADAFSELCNVAETKFYGDQEPLLPDTAPLLSYYPGDGDGDGGGGGSKKKIRSAFWSVLRALELPLWLPRRLTIPDASKERWSKPAAVTAVTMAPVLLSHLCSRATGITSPLAVLLGVLAGASLGAVAFFTTSPDAPPADHLAAWLAAGFVMSVAWAYAVATELLALLVSAAHVMGVDSAALGLTVLAWGNSLGDLVANLAVASRGGGGGGAQVAVAGCYGGPVFDVLVGLGVSMLLSSWASHPRPVAMPAEAGPFQTLGFAAAGICWAVVVMSRRGMRVDRTLGFGLLAIYLCFLCINISQALGPV
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_10g0012090 | OsGoSa_10g0012090.02 | Chr10 | 17505578 | 17505847 | + | IsoSeq | ||
| CDS seq | ctCccacgccactgtgcagtccaaactccacacgatcgtccagtcgccattgatttccccctattggtttttcttcttctatatgtaatgtgcaca |
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| Protein seq | LPRHCAVQTPHDRPVAIDFPLLVFLLLYVMCT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.802197 | 7.405504 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0436800 | RBH | 1.956556 | 4.169875 | 4.368933 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g30054 | RBH | 0.505260 | 1.156690 | 0.436586 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0436800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0012010 | RBH | 0.099049 | 0.0 | 0.214602 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0012220 | RBH | 0.0 | 0.0 | 0.166341 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0011930 | RBH | 0.0 | 0.0 | 2.183232 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0012170 | RBH | 0.063339 | 0.197089 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0011910 | RBH | 18.236919 | 7.412986 | 21.017542 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0260800 | RBH | 3.1747385 | 5.498163 | 2.048073 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0011940 | RBH | 0.212507 | 0.896780 | 0.169322 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0280800 | RBH | 1.855583 | 2.7627845 | 3.121998 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0011690 | RBH | 0.209021 | 0.045790 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0011660 | RBH | 1.269611 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0011670 | RBH | 0.213935 | 0.0 | 0.136141 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0012160 | RBH | 0.325402 | 2.692813 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G012040 | RBH | 0.060474 | 1.653098 | 0.705441 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0011990 | RBH | 3.078111 | 14.490655 | 6.097075 |
