Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_07g0017740 OGI:07058810 | 16/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr07:21721161-21723416
Gene Symbol -
DNA seq

gagtttattgtacattttattctgcattgtgtagaaaggaattttattcaacaggagcgaagaatacacttaaaattcttaaccagaatctaaatacaatatcatccttattttctcagcacagtaatacggggctattcttcaatcccactttcattattgagcttctggtaatctaccttcggtcttcagtaaaatatgttcaattgaagaagtcttgcttggtgggagtacgcagtttccaattcctatgaatgattgaacaaacgctaataagataacaattaacaacacgaaataaaagtatgcataagcgtgtgaactcactcggtgcctggttgacgatggaagcggcaccaccaaagtcacacgagccacttgccctgccggcagtctggtaatagtcattgaatgcataggtcgcatgcgccaccttggtgttaggatcaaagcaccgtccaccaggctggatggcactgcagtctgcgcagctactgcatgcatagtctagtgctgcctgtaaccgcatgtccccgacctctgcgttcgccacgcaccaactcgggttcgggtcacagatgcctaaatcccaacaaacaattcatatatagaacatgtaaaacataataagatgaatatcacaatatgaattgaatgcacaattgcaaaagcttattgatcttaaaagatggccattgaatggaaactaacttggtgatggcttgtagacgatgtaagcagcaccggcaaagttgcacgcgctacttgccttgccattacgctggtagtagtcattgaatgcataagatgcatgtgcaaccatggtgtttggctcatagcacacttttccctgttggatagcactgcagtccgcgccgttactacacgcccagtccagtgctccctgtagccgtgcattcccaatagctgcatttgccacacaccagctctcctttgtgggacatgtaccaccaccatgaaagtcaacatcatacaccttcgtcccatccggatagaacaggccgaagttgctctctatagatggcccacccttcttgttctcgttgaacaaagcgaatatgtacgcagaaacatcctccatattggaggccccgaacaagactcgcttggcaaggccattgttgtatgcttgagcgttagctttagttgccaCcgagtccccatcagcattggcttctgtgacccctgagcggattctaccaccagaggggtggcctgattctgaaactctgatgggcacccgtcctcctgcttgggctaacgaggccctctcgttactaccagaaaccttgtttatcgcatagtaaactgcatctagctcggcatcaaagaggctgtaatatgtgacaccgctcaccggatcgaacacaccagcattgggacggaacgtggcgtactcgagggagattccggtagaaggatccgcatatgcaaagaatgggtagagatttaccataaagtacgagtcagtctgctgcaagaagtcgatcatggggctcatcaccgactgcgcgatgtcatcccggaaagcgcctgcggacggcgggaatgacacctcgaccgagctgaacgcgatcggggtggacacccttatggcatcggcgaggcccagcctcgccagcgccgcgtgcacgttcctcatggccggcaccagctgctgggtcaggtgaggcgcctgatcgaacacctcgttccccacggccacgccgttgatcagcgtggccgggtagtagggcaccacgctgctctccacccacctctgtgcgtagctcggatcccagccggcggagCccagatcggtgttgggtagcgccaccatcaccttgatgccggtgttcgccagcgccctaagcaccgccgggtcggcgtcgaagatcctcaccatcgtgatGccgttcgccctgagaaggctcaccacggattgcgggtccatcagattgtccgcgtccctcccgtagcacacgcccaactcgcccgcatctgctgtgtgcaaattaagaacAaacaaacgacgtcgttgtgattgctaattacgaaagtgagattaattacctttcagccttaatttgtagtttgtacatctctgatcgagttaattacctgcatgggagagaaagagcaacggtaatgcggtggctaagagaacgcggaggaggtgatgagtgagcgccatctctagtcctgtttggcgccgtggcagactgaggatagtcgaattccactgtgtgactgtgt

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CDS seq

atggcgctcactcatcacctcctccgcgttctcttagccaccgcattaccgttgctctttctctcccatgcagatgcgggcgagttgggcgtgtgctacgggagggacgcggacaatctgatggacccgcaatccgtggtgagccttctcagggcgaacggCatcacgatggtgaggatcttcgacgccgacccggcggtgcttagggcgctggcgaacaccggcatcaaggtgatggtggcgctacccaacaccgatctggGctccgccggctgggatccgagctacgcacagaggtgggtggagagcagcgtggtgccctactacccggccacgctgatcaacggcgtggccgtggggaacgaggtgttcgatcaggcgcctcacctgacccagcagctggtgccggccatgaggaacgtgcacgcggcgctggcgaggctgggcctcgccgatgccataagggtgtccaccccgatcgcgttcagctcggtcgaggtgtcattcccgccgtccgcaggcgctttccgggatgacatcgcgcagtcggtgatgagccccatgatcgacttcttgcagcagactgactcgtactttatggtaaatctctacccattctttgcatatgcggatccttctaccggaatctccctcgagtacgccacgttccgtcccaatgctggtgtgttcgatccggtgagcggtgtcacatattacagcctctttgatgccgagctagatgcagtttactatgcgataaacaaggtttctggtagtaacgagagggcctcgttagcccaagcaggaggacgggtgcccatcagagtttcagaatcaggccacccctctggtggtagaatccgctcaggggtcacagaagccaatgctgatggggactcgGtggcaactaaagctaacgctcaagcatacaacaatggccttgccaagcgagtcttgttcggggcctccaatatggaggatgtttctgcgtacatattcgctttgttcaacgagaacaagaagggtgggccatctatagagagcaacttcggcctgttctatccggatgggacgaaggtgtatgatgttgactttcatggtggtggtacatgtcccacaaaggagagctggtgtgtggcaaatgcagctattgggaatgcacggctacagggagcactggactgggcgtgtagtaacggcgcggactgcagtgctatccaacagggaaaagtgtgctatgagccaaacaccatggttgcacatgcatcttatgcattcaatgactactaccagcgtaatggcaaggcaagtagcgcgtgcaactttgccggtgctgcttacatcgtctacaagccatcaccaagcatctgtgacccgaacccgagttggtgcgtggcgaacgcagaggtcggggacatgcggttacaggcagcactagactatgcatgcagtagctgcgcagactgcagtgccatccagcctggtggacggtgctttgatcctaacaccaaggtggcgcatgcgacctatgcattcaatgactattaccagactgccggcagggcaagtggctcgtgtgactttggtggtgccgcttccatcgtcaaccaggcaccgagaattggaaactgcgtactcccaccaagcaagacttcttcaattgaacatattttactgaagaccgaaggtagattaccagaagctcaataa

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Protein seq

MALTHHLLRVLLATALPLLFLSHADAGELGVCYGRDADNLMDPQSVVSLLRANGITMVRIFDADPAVLRALANTGIKVMVALPNTDLGSAGWDPSYAQRWVESSVVPYYPATLINGVAVGNEVFDQAPHLTQQLVPAMRNVHAALARLGLADAIRVSTPIAFSSVEVSFPPSAGAFRDDIAQSVMSPMIDFLQQTDSYFMVNLYPFFAYADPSTGISLEYATFRPNAGVFDPVSGVTYYSLFDAELDAVYYAINKVSGSNERASLAQAGGRVPIRVSESGHPSGGRIRSGVTEANADGDSVATKANAQAYNNGLAKRVLFGASNMEDVSAYIFALFNENKKGGPSIESNFGLFYPDGTKVYDVDFHGGGTCPTKESWCVANAAIGNARLQGALDWACSNGADCSAIQQGKVCYEPNTMVAHASYAFNDYYQRNGKASSACNFAGAAYIVYKPSPSICDPNPSWCVANAEVGDMRLQAALDYACSSCADCSAIQPGGRCFDPNTKVAHATYAFNDYYQTAGRASGSCDFGGAASIVNQAPRIGNCVLPPSKTSSIEHILLKTEGRLPEAQ

Function Glucan endo-1,3-beta-glucosidase 13 [UniProtKB/Swiss-Prot:Q9FJU9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_07g0017740 OsGoSa_07g0017740.01 Chr07 21721161 21723416 - NAM
CDS seq

atggcgctcactcatcacctcctccgcgttctcttagccaccgcattaccgttgctctttctctcccatgcagatgcgggcgagttgggcgtgtgctacgggagggacgcggacaatctgatggacccgcaatccgtggtgagccttctcagggcgaacggCatcacgatggtgaggatcttcgacgccgacccggcggtgcttagggcgctggcgaacaccggcatcaaggtgatggtggcgctacccaacaccgatctggGctccgccggctgggatccgagctacgcacagaggtgggtggagagcagcgtggtgccctactacccggccacgctgatcaacggcgtggccgtggggaacgaggtgttcgatcaggcgcctcacctgacccagcagctggtgccggccatgaggaacgtgcacgcggcgctggcgaggctgggcctcgccgatgccataagggtgtccaccccgatcgcgttcagctcggtcgaggtgtcattcccgccgtccgcaggcgctttccgggatgacatcgcgcagtcggtgatgagccccatgatcgacttcttgcagcagactgactcgtactttatggtaaatctctacccattctttgcatatgcggatccttctaccggaatctccctcgagtacgccacgttccgtcccaatgctggtgtgttcgatccggtgagcggtgtcacatattacagcctctttgatgccgagctagatgcagtttactatgcgataaacaaggtttctggtagtaacgagagggcctcgttagcccaagcaggaggacgggtgcccatcagagtttcagaatcaggccacccctctggtggtagaatccgctcaggggtcacagaagccaatgctgatggggactcgGtggcaactaaagctaacgctcaagcatacaacaatggccttgccaagcgagtcttgttcggggcctccaatatggaggatgtttctgcgtacatattcgctttgttcaacgagaacaagaagggtgggccatctatagagagcaacttcggcctgttctatccggatgggacgaaggtgtatgatgttgactttcatggtggtggtacatgtcccacaaaggagagctggtgtgtggcaaatgcagctattgggaatgcacggctacagggagcactggactgggcgtgtagtaacggcgcggactgcagtgctatccaacagggaaaagtgtgctatgagccaaacaccatggttgcacatgcatcttatgcattcaatgactactaccagcgtaatggcaaggcaagtagcgcgtgcaactttgccggtgctgcttacatcgtctacaagccatcaccaagcatctgtgacccgaacccgagttggtgcgtggcgaacgcagaggtcggggacatgcggttacaggcagcactagactatgcatgcagtagctgcgcagactgcagtgccatccagcctggtggacggtgctttgatcctaacaccaaggtggcgcatgcgacctatgcattcaatgactattaccagactgccggcagggcaagtggctcgtgtgactttggtggtgccgcttccatcgtcaaccaggcaccgagaattggaaactgcgtactcccaccaagcaagacttcttcaattgaacatattttactgaagaccgaaggtagattaccagaagctcaataa

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Protein seq

MALTHHLLRVLLATALPLLFLSHADAGELGVCYGRDADNLMDPQSVVSLLRANGITMVRIFDADPAVLRALANTGIKVMVALPNTDLGSAGWDPSYAQRWVESSVVPYYPATLINGVAVGNEVFDQAPHLTQQLVPAMRNVHAALARLGLADAIRVSTPIAFSSVEVSFPPSAGAFRDDIAQSVMSPMIDFLQQTDSYFMVNLYPFFAYADPSTGISLEYATFRPNAGVFDPVSGVTYYSLFDAELDAVYYAINKVSGSNERASLAQAGGRVPIRVSESGHPSGGRIRSGVTEANADGDSVATKANAQAYNNGLAKRVLFGASNMEDVSAYIFALFNENKKGGPSIESNFGLFYPDGTKVYDVDFHGGGTCPTKESWCVANAAIGNARLQGALDWACSNGADCSAIQQGKVCYEPNTMVAHASYAFNDYYQRNGKASSACNFAGAAYIVYKPSPSICDPNPSWCVANAEVGDMRLQAALDYACSSCADCSAIQPGGRCFDPNTKVAHATYAFNDYYQTAGRASGSCDFGGAASIVNQAPRIGNCVLPPSKTSSIEHILLKTEGRLPEAQ

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Gene Transcript Chromosome Start End Strand Source
OsGoSa_07g0017740 OsGoSa_07g0017740.02 Chr07 21721161 21723416 - NAM
CDS seq

atggcgctcactcatcacctcctccgcgttctcttagccaccgcattaccgttgctctttctctcccatgcagatgcgggcgagttgggcgtgtgctacgggagggacgcggacaatctgatggacccgcaatccgtggtgagccttctcagggcgaacggCatcacgatggtgaggatcttcgacgccgacccggcggtgcttagggcgctggcgaacaccggcatcaaggtgatggtggcgctacccaacaccgatctggGctccgccggctgggatccgagctacgcacagaggtgggtggagagcagcgtggtgccctactacccggccacgctgatcaacggcgtggccgtggggaacgaggtgttcgatcaggcgcctcacctgacccagcagctggtgccggccatgaggaacgtgcacgcggcgctggcgaggctgggcctcgccgatgccataagggtgtccaccccgatcgcgttcagctcggtcgaggtgtcattcccgccgtccgcaggcgctttccgggatgacatcgcgcagtcggtgatgagccccatgatcgacttcttgcagcagactgactcgtactttatggtaaatctctacccattctttgcatatgcggatccttctaccggaatctccctcgagtacgccacgttccgtcccaatgctggtgtgttcgatccggtgagcggtgtcacatattacagcctctttgatgccgagctagatgcagtttactatgcgataaacaaggtttctggtagtaacgagagggcctcgttagcccaagcaggaggacgggtgcccatcagagtttcagaatcaggccacccctctggtggtagaatccgctcaggggtcacagaagccaatgctgatggggactcgGtggcaactaaagctaacgctcaagcatacaacaatggccttgccaagcgagtcttgttcggggcctccaatatggaggatgtttctgcgtacatattcgctttgttcaacgagaacaagaagggtgggccatctatagagagcaacttcggcctgttctatccggatgggacgaaggtgtatgatgttgactttcatggtggtggtacatgtcccacaaaggagagctggtgtgtggcaaatgcagctattgggaatgcacggctacagggagcactggactgggcgtgtagtaacggcgcggactgcagtgctatccaacagggaaaagtgtgctatgagccaaacaccatggttgcacatgcatcttatgcattcaatgactactaccagcgtaatggcaaggcaagtagcgcgtgcaactttgccggtgctgcttacatcgtctacaagccatcaccaagttag

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Protein seq

MALTHHLLRVLLATALPLLFLSHADAGELGVCYGRDADNLMDPQSVVSLLRANGITMVRIFDADPAVLRALANTGIKVMVALPNTDLGSAGWDPSYAQRWVESSVVPYYPATLINGVAVGNEVFDQAPHLTQQLVPAMRNVHAALARLGLADAIRVSTPIAFSSVEVSFPPSAGAFRDDIAQSVMSPMIDFLQQTDSYFMVNLYPFFAYADPSTGISLEYATFRPNAGVFDPVSGVTYYSLFDAELDAVYYAINKVSGSNERASLAQAGGRVPIRVSESGHPSGGRIRSGVTEANADGDSVATKANAQAYNNGLAKRVLFGASNMEDVSAYIFALFNENKKGGPSIESNFGLFYPDGTKVYDVDFHGGGTCPTKESWCVANAAIGNARLQGALDWACSNGADCSAIQQGKVCYEPNTMVAHASYAFNDYYQRNGKASSACNFAGAAYIVYKPSPS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
RI Chr07 21721488 21723161 - OsGoSa_07g0017740.02 OsGoSa_07g0017740.01,OsGoSa_07g0017740.02 All

Expression

Leaf Root Panicle
FPKM 0.0 3.018816 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0538000 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g35350 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os07g0538000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0018020 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0017930 RBH 0.0 0.000000 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0017900 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0017820 RBH 0.0 0.086112 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0017910 RBH 0.0 1.678708 1.099422
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0344200 RBH 0.061162 10.9096475 0.8016015
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0018410 RBH 0.0 0.233929 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0358800 RBH 0.007792 2.4689855 0.0366365
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0017650 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0017790 RBH 0.0 7.412187 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0017820 SBH 0.0 126.710030 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0018030 RBH 0.0 0.0 0.111915
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0017810 RBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G017790 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0017650 RBH 0.0 0.0 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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