Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsGoSa_04g0027290		OGI:04027370 \| 16/16			GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)			Chr04:34390167-34395283		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		RLCK162, OsRLCK162, SDK6, SDRLK-30, SDRLK-71, RLCK165, OsRLCK165, SDK9
DNA seq		ctacatttttttataggaactctcAtataatatcatgagcattgccactatctgaaaacgaggcgacagtgtgaaattttgcttaccaggaggctcagcaaggcggaggtacaggttctcaccaaggctggccttcttctctgagtcgacaagctcccctgtccaaaccaagcatcttgacgggtcagccatggtgccgccactgctcaagttggcgtaagcatatgccttgcaagagcagttgctgctgcactcggccacgcactggtcgaagctcctgttccggatctgcaagaacttgtcggggaccttcatgtcaggcaatgacacgaagcggtgaccgccctctccgcatctcagctcttcctttctccggcatcctgattgcgagatgctgggatctacaggctcgaacccatcgaggcaccggcatgccgggacggcccccgtgaagtcgcagtagccaaacgggccgcACGagccatagacctcgcagctgccggcggcggggcgctggaagatcaacatccatgacgacgagctgttgtcccagctcaggaacatcatcgtgcccgtgctgtcaagcgtgaggcgtgtgtagatggagctgtcggagacagtgtatgagtagtagagcttgttccctgagtcgatgagtgtttgatacatgaataagctgctgttactcggatactgggcaccggacaccgtcacgctggttctgacgccgttacggcagtatggcttggtcccgttccaggtcatgccctggaggtccgagctGgggtcgaggctgaaggagaaatctccagtggatgggtcatcatggctcctccacgcagtgaggcgtccgacgatctcggacttgtagctcatcaagaacatcatgcctgcgaggatggtatcagtcgggtgatcgaagctttgccatatgtcggtgccgtttggcaaccggagaacgaagttccccgtgtcgagcagcacggcggaggctccggtgacgctgatcttggttgtccaaagaatgtggccttgggagtccgacagcaccatgcctgagctgttggtgatggcaagggtcgctgacgaaggggtggtgattgggttgtcgcggttggcaacccacacaacggtgcgctgggggatgttgtggaaccagactccaacatagaggctattgctgaagttggccggggagaagaagccgagggcaaagatgccgcccttggagatgagcatctcgctgggaaagattggctttcccagtgtcagctggtcatcggttttgcatagaggaatcgagagcagcaggaggaacatgagaaaatagaccatattgcctgttagactttctgcttcgtttgcttgtcatgggtcaagttatatctttcattcataatgcagatatggactggtgtagttggagttcaattcccttgctgtcacctcatctgaagatcaggagaaatgtgagatggctaagtcctgattcagactcatggacagagacagtaaaggaccctgtctgaattctgatgaccaggtcacctggtcatgatactccaagtcgtgtgacaatgctgcacgaaaacgaaagaatgctgctgccatggactttggagtgataggctagtgcaggcaaaagcgaaacctcacgtgcgttccatggctccacgtggtgtcacaggcccttgatgctgccactctccatttgaagaagtataataggtattaaaaccaattatgatttttatcccaagttatatatataTttttttgaaggaaaggcaagtaatcgtagtctttactgctctcttttagcttacctagttttgagcacagtggtttcaattctccactctcttttttcttaatcgcctagtgcagaaacttccaactcaccaataattgagcgaaattgcttatggaagaatttcctttttttttttttgtaaaccattgaagatgaaccatacacccacaaagcaatcatattcctaggttcttgcacaattgatcaagtggtgaattctacagccagctatatctgaaatttaaacatctaacgtccttgtagtgtggtaagacttatactgttcacagacttgttggcatcctctcttgccccttctgccatgcaattccttggcacaaaatatgcaggttgcttagaagtaggaagtgttgtggcttcattctcgaacatggccacaactgatgacatgagtggtctagcatttgggtcttcctgaacgcataacagtcctacatggatacagagcaaaaactcattaagcgaatagcactccagaataattgagtccacaaatttctctgcctttccatctttccacaagctccatgcctgaacaaagagaggagatatcctaatcagtgctaaatcctagctgttgaaattttgttcatctcaatatttcatagaacttacacaggctataaggtttggaaaatccattataagatgagttgagctgatcttacaaccacttataagttccaagactaaaacaccaaagctatatgtgtcagacttgacagagaagatgccttccattgcatattcaggagacatgtaaccactgtttgaatcgtgccaccaataacaagaagtgtgggtaatttgaaagtatccaagtatataaaatttagtattttaatcataagtagtgcaagagttactcactatgtcccgactacatgtttagtgtttgcttgatgctggttgccaccaaagatccttgccataccaaaatctgatattttggggctcatctcctcatccaataaaatattgctggctttgagatctctgtgaattactctcattcttgaatcttggtggagatagacaagacctctggctactcctttgattatgttgaaccttgtttgccaatcaagtataggcttttttgaatcatctaccatgaacagtatgaaacaagacttaaagttgttcaggcacctctcccaccaaaagtgataaagggaaaatgaatatatgattaggcgtaccaaaaagaaagtaatccaagcttttgttgcgtaaatattcAaaaataagaagcttttcatctccatgaatacagcagccaagaagcctaactagatttttgtgctgcaatttgtcaataagaacaacttcatttgtaaaatgctctatcccttgtgtgcaacctgtgttgagccttttgacagcaacttctctcccgccttccaatttcccctgtgtaatacaatcattttaaatttataaaatattgtaggattctccagtgtttgtgattgtcagcctgaattgtttaccttataaaccttaccgaaacctccttttccaagaatgttggaatcgctgaaattgtttgttgccgtgacaacgtattcaaaattaacatgtgaaaattctaaattctgctcaattagttcttgagatctaaggtttcctagcagcattctgttctgatttttgttgtttctccgtttgcctaataacaccgatgctgtcagtacaattacaggaagacatcatactatgaattcataagtaacggcccttgccataccttttgattgccatttcctgacaaggtatatgcatgtgagcatcagcaggcatggaataattgtgactaaaaccaccactagatatctgttctttttcttatcttcagaagtgtgtcctatcaagagaagtaaacaaaattatgagaatttctaaaccataagtatgcatggatgttgcttttaatttgatgtgcagactatctaagattttgttgtctctgcaggggaagaaatggtgagcataccaggagagtcggctaaccggaggtataggttgtcaccaaggcttgccctcgccatgtcagcaagatccccagtccagagcaagcaccttgactgatcggacatggtgtcggctttggtcaagttgccataagcataatcgtaggccatgcatgagcagttgtggctgcacttggccatgcactcctcgaagcttctgttctggacttgcaagaacttgtcagggagcttcattccagacatggtcacgaaatggttcctacctccgcatcccaactgttgctttcttcgacatcctctcgaagagttgaaatcacttggctcgaatccatcaaggcactggcatctggggatggccaatgtgaagtcgcagtagccgaatgggccacatgaggcgtagagattgcagtcaccagcggccgctggctgttgagagatgactgtccaggacgatgagctcccgttccaactcaggaacctcatgttgcccatgtagtcaagcttgattcgtgtgtatggggagccatcagaggttgtgtacataatgtacaactcatccctagtgttcacaagtgatttgtacatcaaagtggcaatgttgctcccgtatgcttcaccggacactaacactctattaagtgaaagtgcaatgaaacggtaatatggcttggtcccgtgccagatgaaggcctgaaggtttgatctggggtcgctgtggtaggagaagtccccggtggatgggtcattcggtCccttccaagcgacaagtcgcatggcgacttgtgccttgtatctcaggaaaaacttcttgttggggagaagggtatcagttgggtgatcaaagctttgccatgcggttgtattgtccggcagccgaagaaccaagtttcctgagtctagcagcactgcataagctcggtcacctctggtgttgatgttggccatcgtcgtccaaaaggtgtggccttctaaatctgacaatacaaagttagaactattgctgatggcgagcatcgcagatgaaggggcagtgatcggcttgtcacggttggcaatccaaacgtatgtgcgctctgggatgttgttgtaccatatgccgaggaataagctctggttggaagttgctggggAGAagaagccgagtgcgaaaaccccgttctgggagacgagcacgtcgccagggtagagtttctttgctTGtgtcagctgatcatcgcacttgcagaatgagaagatgaaaagagggaagcaagccataccattcatttggtcttgttcttagctttgcc More
CDS seq		atgaatggtatggcttgcttccctcttttcatcttctcattctgcaagtgcgatgatcagctgacaCAagcaaagaaactctaccctggcgacgtgctcgtctcccagaacggggttttcgcactcggcttctTCTccccagcaacttccaaccagagcttattcctcggcatatggtacaacaacatcccagagcgcacatacgtttggattgccaaccgtgacaagccgatcactgccccttcatctgcgatgctcgccatcagcaatagttctaactttgtattgtcagatttagaaggccacaccttttggacgacgatggccaacatcaacaccagaggtgaccgagcttatgcagtgctgctagactcaggaaacttggttcttcggctgccggacaatacaaccgcatggcaaagctttgatcacccaactgatacccttctccccaacaagaagtttttcctgagatacaaggcacaagtcgccatgcgacttgtcgcttggaaggGaccgaatgacccatccaccggggacttctcctaccacagcgaccccagatcaaaccttcaggccttcatctggcacgggaccaagccatattaccgtttcattgcactttcacttaatagagtgttagtgtccggtgaagcatacgggagcaacattgccactttgatgtacaaatcacttgtgaacactagggatgagttgtacattatgtacacaacctctgatggctccccatacacacgaatcaagcttgactacatgggcaacatgaggttcctgagttggaacgggagctcatcgtcctggacagtcatctctcaacagccagcggccgctggtgactgcaatctctacgcctcatgtggcccattcggctactgcgacttcacattggccatccccagatgccagtgccttgatggattcgagccaagtgatttcaactcttcgagaggatgtcgaagaaagcaacagttgggatgcggaggtaggaaccatttcgtgaccatgtctggaatgaagctccctgacaagttcttgcaagtccagaacagaagcttcgaggagtgcatggccaagtgcagccacaactgctcatgcatggcctacgattatgcttatggcaacttgaccaaagccgacaccatgtccgatcagtcaaggtgcttgctctggactggggatcttgctgacatggcgagggcaagccttggtgacaacctatacctccggttagccgactctcctggacacacttctgaagataagaaaaagaacagatatctagtggtggttttagtcacaattattccatgcctgctgatgctcacatgcatataccttgtcaggaaatggcaatcaaaagcatcggtgttattaggcaaacggagaaacaacaaaaatcagaacagaatgctgctaggaaaccttagatctcaagaactaattgagcagaatttagaattttcacatgttaattttgaatacgttgtcacggcaacaaacaatttcagcgattccaacattcttggaaaaggaggtttcggtaaggtttataaggggaaattggaaggcgggagagaagttgctgtcaaaaggctcaacacaggttgcacacaagggatagagcattttacaaatgaagttgttcttattgacaaattgcagcacaaaaatctagttaggcttcttggctgctgtattcatggagatgaaaagcttcttattttTgaatatttacgcaacaaaagcttggattactttctttttgatgattcaaaaaagcctatacttgattggcaaacaaggttcaacataatcaaaggagtagccagaggtcttgtctatctccaccaagattcaagaatgagagtaattcacagagatctcaaagccagcaatattttattggatgaggagatgagccccaaaatatcagattttggtatggcaaggatctttggtggcaaccagcatcaagcaaacactaaacatgtagtcgggacatatggttacatgtctcctgaatatgcaatggaaggcatcttctctgtcaagtctgacacatatagctttggtgttttagtcttggaacttataagtggttgtaagatcagctcaactcatcttataatggattttccaaaccttatagcctgtgcatggagcttgtggaaagatggaaaggcagagaaatttgtggactcaattattctggagtgctattcgcttaatgagtttttgctctgtatccatgtaggactgttatgcgttcaggaagacccaaatgctagaccactcatgtcatcagttgtggccatgttcgagaatgaagccacaacacttcctacttctaagcaacctgcatattttgtgccaaggaattgcatggcagaaggggcaagagaggatgccaacaagtctgtgaacagtataagtcttaccacactacaaggaccaaacgaagcagaaagtctaacaggcaatatggtctattttctcatgttcctcctgctgctctcgattcctctatgcaaaaccgatgaccagctgacactgggaaagccaatctttcccagcgagatgctcatctccaagggcggcatctttgccctcggcttcttctccccggccaacttcagcaatagcctctatgttggagtctggttccacaacatcccccagcgcaccgttgtgtgggttgccaaccgcgacaacccaatcaccaccccttcgtcagcgacccttgccatcaccaacagctcaggcatggtgctgtcggactcccaaggccacattctttggacaaccaagatcagcgtcaccggagcctccgccgtgctgctcgacacggggaacttcgttctccggttgccaaacggcaccgacatatggcaaagcttcgatcacccgactgataccatcctcgcaggcatgatgttcttgatgagctacaagtccgagatcgtcggacgcctcactgcgtggaggagccatgatgacccatccactggagatttctccttcagcctcgacccCagctcggacctccagggcatgacctggaacgggaccaagccatactgccgtaacggcgtcagaaccagcgtgacggtgtccggtgcccagtatccgagtaacagcagcttattcatgtatcaaacactcatcgactcagggaacaagctctactactcatacactgtctccgacagctccatctacacacgcctcacgcttgacagcacgggcacgatgatgttcctgagctgggacaacagctcgtcgtcatggatgttgatcttccagcgccccgccgccggcagctgcgaggtctatggctCGTgcggcccgtttggctactgcgacttcacgggggccgtcccggcatgccggtgcctcgatgggttcgagcctgtagatcccagcatctcgcaatcaggatgccggagaaaggaagagctgagatgcggagagggcggtcaccgcttcgtgtcattgcctgacatgaaggtccccgacaagttcttgcagatccggaacaggagcttcgaccagtgcgtggccgagtgcagcagcaactgctcttgcaaggcatatgcttacgccaacttgagcagtggcggcaccatggctgacccgtcaagatgcttggtttggacaggggagcttgtcgactcagagaagaaggccagccttggtgagaacctgtacctccgccttgctgagcctcctggtaagcaaaatttcacactgtcgcctcgttttcagatagtggcaatgctcatgatattataTgagagttcctataaaaaaatgtag More
Protein seq		MNGMACFPLFIFSFCKCDDQLTQAKKLYPGDVLVSQNGVFALGFFSPATSNQSLFLGIWYNNIPERTYVWIANRDKPITAPSSAMLAISNSSNFVLSDLEGHTFWTTMANINTRGDRAYAVLLDSGNLVLRLPDNTTAWQSFDHPTDTLLPNKKFFLRYKAQVAMRLVAWKGPNDPSTGDFSYHSDPRSNLQAFIWHGTKPYYRFIALSLNRVLVSGEAYGSNIATLMYKSLVNTRDELYIMYTTSDGSPYTRIKLDYMGNMRFLSWNGSSSSWTVISQQPAAAGDCNLYASCGPFGYCDFTLAIPRCQCLDGFEPSDFNSSRGCRRKQQLGCGGRNHFVTMSGMKLPDKFLQVQNRSFEECMAKCSHNCSCMAYDYAYGNLTKADTMSDQSRCLLWTGDLADMARASLGDNLYLRLADSPGHTSEDKKKNRYLVVVLVTIIPCLLMLTCIYLVRKWQSKASVLLGKRRNNKNQNRMLLGNLRSQELIEQNLEFSHVNFEYVVTATNNFSDSNILGKGGFGKVYKGKLEGGREVAVKRLNTGCTQGIEHFTNEVVLIDKLQHKNLVRLLGCCIHGDEKLLIFEYLRNKSLDYFLFDDSKKPILDWQTRFNIIKGVARGLVYLHQDSRMRVIHRDLKASNILLDEEMSPKISDFGMARIFGGNQHQANTKHVVGTYGYMSPEYAMEGIFSVKSDTYSFGVLVLELISGCKISSTHLIMDFPNLIACAWSLWKDGKAEKFVDSIILECYSLNEFLLCIHVGLLCVQEDPNARPLMSSVVAMFENEATTLPTSKQPAYFVPRNCMAEGAREDANKSVNSISLTTLQGPNEAESLTGNMVYFLMFLLLLSIPLCKTDDQLTLGKPIFPSEMLISKGGIFALGFFSPANFSNSLYVGVWFHNIPQRTVVWVANRDNPITTPSSATLAITNSSGMVLSDSQGHILWTTKISVTGASAVLLDTGNFVLRLPNGTDIWQSFDHPTDTILAGMMFLMSYKSEIVGRLTAWRSHDDPSTGDFSFSLDPSSDLQGMTWNGTKPYCRNGVRTSVTVSGAQYPSNSSLFMYQTLIDSGNKLYYSYTVSDSSIYTRLTLDSTGTMMFLSWDNSSSSWMLIFQRPAAGSCEVYGSCGPFGYCDFTGAVPACRCLDGFEPVDPSISQSGCRRKEELRCGEGGHRFVSLPDMKVPDKFLQIRNRSFDQCVAECSSNCSCKAYAYANLSSGGTMADPSRCLVWTGELVDSEKKASLGENLYLRLAEPPGKQNFTLSPRFQIVAMLMILYESSYKKM
Function		Receptor-like serine/threonine-protein kinase SD1-8 [UniProtKB/Swiss-Prot:O81905]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsGoSa_04g0027290	OsGoSa_04g0027290.01	Chr04	34390167	34395283	-	NAM
CDS seq	atgaatggtatggcttgcttccctcttttcatcttctcattctgcaagtgcgatgatcagctgacaCAagcaaagaaactctaccctggcgacgtgctcgtctcccagaacggggttttcgcactcggcttctTCTccccagcaacttccaaccagagcttattcctcggcatatggtacaacaacatcccagagcgcacatacgtttggattgccaaccgtgacaagccgatcactgccccttcatctgcgatgctcgccatcagcaatagttctaactttgtattgtcagatttagaaggccacaccttttggacgacgatggccaacatcaacaccagaggtgaccgagcttatgcagtgctgctagactcaggaaacttggttcttcggctgccggacaatacaaccgcatggcaaagctttgatcacccaactgatacccttctccccaacaagaagtttttcctgagatacaaggcacaagtcgccatgcgacttgtcgcttggaaggGaccgaatgacccatccaccggggacttctcctaccacagcgaccccagatcaaaccttcaggccttcatctggcacgggaccaagccatattaccgtttcattgcactttcacttaatagagtgttagtgtccggtgaagcatacgggagcaacattgccactttgatgtacaaatcacttgtgaacactagggatgagttgtacattatgtacacaacctctgatggctccccatacacacgaatcaagcttgactacatgggcaacatgaggttcctgagttggaacgggagctcatcgtcctggacagtcatctctcaacagccagcggccgctggtgactgcaatctctacgcctcatgtggcccattcggctactgcgacttcacattggccatccccagatgccagtgccttgatggattcgagccaagtgatttcaactcttcgagaggatgtcgaagaaagcaacagttgggatgcggaggtaggaaccatttcgtgaccatgtctggaatgaagctccctgacaagttcttgcaagtccagaacagaagcttcgaggagtgcatggccaagtgcagccacaactgctcatgcatggcctacgattatgcttatggcaacttgaccaaagccgacaccatgtccgatcagtcaaggtgcttgctctggactggggatcttgctgacatggcgagggcaagccttggtgacaacctatacctccggttagccgactctcctggacacacttctgaagataagaaaaagaacagatatctagtggtggttttagtcacaattattccatgcctgctgatgctcacatgcatataccttgtcaggaaatggcaatcaaaagcatcggtgttattaggcaaacggagaaacaacaaaaatcagaacagaatgctgctaggaaaccttagatctcaagaactaattgagcagaatttagaattttcacatgttaattttgaatacgttgtcacggcaacaaacaatttcagcgattccaacattcttggaaaaggaggtttcggtaaggtttataaggggaaattggaaggcgggagagaagttgctgtcaaaaggctcaacacaggttgcacacaagggatagagcattttacaaatgaagttgttcttattgacaaattgcagcacaaaaatctagttaggcttcttggctgctgtattcatggagatgaaaagcttcttattttTgaatatttacgcaacaaaagcttggattactttctttttgatgattcaaaaaagcctatacttgattggcaaacaaggttcaacataatcaaaggagtagccagaggtcttgtctatctccaccaagattcaagaatgagagtaattcacagagatctcaaagccagcaatattttattggatgaggagatgagccccaaaatatcagattttggtatggcaaggatctttggtggcaaccagcatcaagcaaacactaaacatgtagtcgggacatatggttacatgtctcctgaatatgcaatggaaggcatcttctctgtcaagtctgacacatatagctttggtgttttagtcttggaacttataagtggttgtaagatcagctcaactcatcttataatggattttccaaaccttatagcctgtgcatggagcttgtggaaagatggaaaggcagagaaatttgtggactcaattattctggagtgctattcgcttaatgagtttttgctctgtatccatgtaggactgttatgcgttcaggaagacccaaatgctagaccactcatgtcatcagttgtggccatgttcgagaatgaagccacaacacttcctacttctaagcaacctgcatattttgtgccaaggaattgcatggcagaaggggcaagagaggatgccaacaagtctgtgaacagtataagtcttaccacactacaaggaccaaacgaagcagaaagtctaacaggcaatatggtctattttctcatgttcctcctgctgctctcgattcctctatgcaaaaccgatgaccagctgacactgggaaagccaatctttcccagcgagatgctcatctccaagggcggcatctttgccctcggcttcttctccccggccaacttcagcaatagcctctatgttggagtctggttccacaacatcccccagcgcaccgttgtgtgggttgccaaccgcgacaacccaatcaccaccccttcgtcagcgacccttgccatcaccaacagctcaggcatggtgctgtcggactcccaaggccacattctttggacaaccaagatcagcgtcaccggagcctccgccgtgctgctcgacacggggaacttcgttctccggttgccaaacggcaccgacatatggcaaagcttcgatcacccgactgataccatcctcgcaggcatgatgttcttgatgagctacaagtccgagatcgtcggacgcctcactgcgtggaggagccatgatgacccatccactggagatttctccttcagcctcgacccCagctcggacctccagggcatgacctggaacgggaccaagccatactgccgtaacggcgtcagaaccagcgtgacggtgtccggtgcccagtatccgagtaacagcagcttattcatgtatcaaacactcatcgactcagggaacaagctctactactcatacactgtctccgacagctccatctacacacgcctcacgcttgacagcacgggcacgatgatgttcctgagctgggacaacagctcgtcgtcatggatgttgatcttccagcgccccgccgccggcagctgcgaggtctatggctCGTgcggcccgtttggctactgcgacttcacgggggccgtcccggcatgccggtgcctcgatgggttcgagcctgtagatcccagcatctcgcaatcaggatgccggagaaaggaagagctgagatgcggagagggcggtcaccgcttcgtgtcattgcctgacatgaaggtccccgacaagttcttgcagatccggaacaggagcttcgaccagtgcgtggccgagtgcagcagcaactgctcttgcaaggcatatgcttacgccaacttgagcagtggcggcaccatggctgacccgtcaagatgcttggtttggacaggggagcttgtcgactcagagaagaaggccagccttggtgagaacctgtacctccgccttgctgagcctcctggtaagcaaaatttcacactgtcgcctcgttttcagatagtggcaatgctcatgatattataTgagagttcctataaaaaaatgtag More
Protein seq	MNGMACFPLFIFSFCKCDDQLTQAKKLYPGDVLVSQNGVFALGFFSPATSNQSLFLGIWYNNIPERTYVWIANRDKPITAPSSAMLAISNSSNFVLSDLEGHTFWTTMANINTRGDRAYAVLLDSGNLVLRLPDNTTAWQSFDHPTDTLLPNKKFFLRYKAQVAMRLVAWKGPNDPSTGDFSYHSDPRSNLQAFIWHGTKPYYRFIALSLNRVLVSGEAYGSNIATLMYKSLVNTRDELYIMYTTSDGSPYTRIKLDYMGNMRFLSWNGSSSSWTVISQQPAAAGDCNLYASCGPFGYCDFTLAIPRCQCLDGFEPSDFNSSRGCRRKQQLGCGGRNHFVTMSGMKLPDKFLQVQNRSFEECMAKCSHNCSCMAYDYAYGNLTKADTMSDQSRCLLWTGDLADMARASLGDNLYLRLADSPGHTSEDKKKNRYLVVVLVTIIPCLLMLTCIYLVRKWQSKASVLLGKRRNNKNQNRMLLGNLRSQELIEQNLEFSHVNFEYVVTATNNFSDSNILGKGGFGKVYKGKLEGGREVAVKRLNTGCTQGIEHFTNEVVLIDKLQHKNLVRLLGCCIHGDEKLLIFEYLRNKSLDYFLFDDSKKPILDWQTRFNIIKGVARGLVYLHQDSRMRVIHRDLKASNILLDEEMSPKISDFGMARIFGGNQHQANTKHVVGTYGYMSPEYAMEGIFSVKSDTYSFGVLVLELISGCKISSTHLIMDFPNLIACAWSLWKDGKAEKFVDSIILECYSLNEFLLCIHVGLLCVQEDPNARPLMSSVVAMFENEATTLPTSKQPAYFVPRNCMAEGAREDANKSVNSISLTTLQGPNEAESLTGNMVYFLMFLLLLSIPLCKTDDQLTLGKPIFPSEMLISKGGIFALGFFSPANFSNSLYVGVWFHNIPQRTVVWVANRDNPITTPSSATLAITNSSGMVLSDSQGHILWTTKISVTGASAVLLDTGNFVLRLPNGTDIWQSFDHPTDTILAGMMFLMSYKSEIVGRLTAWRSHDDPSTGDFSFSLDPSSDLQGMTWNGTKPYCRNGVRTSVTVSGAQYPSNSSLFMYQTLIDSGNKLYYSYTVSDSSIYTRLTLDSTGTMMFLSWDNSSSSWMLIFQRPAAGSCEVYGSCGPFGYCDFTGAVPACRCLDGFEPVDPSISQSGCRRKEELRCGEGGHRFVSLPDMKVPDKFLQIRNRSFDQCVAECSSNCSCKAYAYANLSSGGTMADPSRCLVWTGELVDSEKKASLGENLYLRLAEPPGKQNFTLSPRFQIVAMLMILYESSYKKM More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsGoSa_04g0027290	OsGoSa_04g0027290.02	Chr04	34392118	34392410	-	IsoSeq
CDS seq	ccaaatgctagaccactcatgtcatcagttgtggccatgttcgagaatgaagccacaacacttcctacttctaagcaacctgcatattttgtgccaaggaattgcatggcagaaggggcaagagaggatgccaacaagtctgtgaacagtataagtcttaccacactacaagga
Protein seq	PNARPLMSSVVAMFENEATTLPTSKQPAYFVPRNCMAEGAREDANKSVNSISLTTLQG

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	7.079244	6.721892	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0632600	RBH	0.426749	0.950430	3.031546
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g54010	RBH	0.468947	0.578079	0.668178
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0632600	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0027830	RBH	0.114712	0.582106	1.226958
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0028590	RBH	0.390965	0.000000	2.198330
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0028230	SBH	0.369437	0.739790	2.057186
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0028030	SBH	0.031282	0.013722	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0028290	SBH	28.615248	3.884939	5.803555
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0508300	SBH	0	0.081849	0
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0026980	SBH	0.129210	0.011754	0.285752
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0511200	RBH	0	0	0
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0027400	RBH	0.500196	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0027200	SBH	0.0	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_08g0004940	SBH	0.602334	3.834400	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0027870	RBH	0.120373	0.000000	0.162799
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0027880	SBH	0.0	0.604004	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G027230	RBH	0.180040	0.0	0.169102
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0027160	RBH	0.766234	0.0	0.641462

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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