Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_04g0019170 OGI:04077040 | 16/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr04:27539392-27545628
Gene Symbol -
DNA seq

aaaaaaaaaaaccttggaagaaaggcacagcagtacagcagccagcagcctcagctccctcgccaagcagagagcgcgaggaagaagaaggaagaaggcgcggaccgggatccccccgtcgggccccacatggccgcgccttgagccccgccccgtcccgcccactccggacccagggcaccgagatgccgccgcggcgagcggcgctgctcctcctcgctctcgccgtgtatggtatgttccttcaagattgtgtgtttcttttcTtttttttttctttctacccgctgttcttcttgcccggccgggcgggcgatttcttcggggtttgaggttgcaatgcggagtggaattgttgtctggtttgtttcgttgcaatgggatcgccggcctggaagaagagcggtcatggctggctggcttgcgtggcacgttccccaggggttgtggaaagatggtttcgcctttgcttcatggagctgttcctcctgtgattcgtccgagcgcatcggcatctgaatccagtaggcgtggacatggcgtagattcccgtcaattttctccttttgattctcctctctttccctttcttgaatcaacccatgccgagtctgagaaagtttggaatttttatgcaaatctgttgttaaaaatttgctgcattggcgctgcccgcagcgattttcggtgggcttttactacgcttgatttgccggcttaaacccaccgcgtttcagtactgcaccagctgtagtggttggtgtgcatttgcctttctgttgtattgaaccgaaaaagttaacaagcttttggtgcaatgctcgattagtggtcaaggtttttggcgaggttcctgctgttctgttctcgtcttgcaatcttgcagacacatagttttcgttgcactctgcattgctcatctatagtaattttcttgtttttaatcaaactgtaattttgtagtaattcgcactcattcgtcctgcattatctgtaatatttggctgtagtttcttcaaaacaaaggccggaatgaattccattatctaaaaaaaatatatacagtggcgtgcaaaaccgtgtgagttactgcattagtattccagtttccactccatgaaacatatgttcattgtagttatgctgaagtaatagttaagagtatacagatgttatgtatcatatgaacagcatttttttttgggtcaatatccttgcagtgccactgggaacggcaagctcaacaactatcgcgtcgtacttacttgggttatggagtagagcacatcggcattctcttcctgcccctgctccagctccagctccagctccagctccagcccctgaaactcaccgtaagtagaaatactgttgaaatttgtacacttaaatagtaattcaggtgtaacatgttctgcaaacttaaatatttatttcatcagtattcttacattcaatgattttcttgttgtcttgaaccgtcttgtaattttgtcgatcattttggttctcaggacctggtattagacacccagtgcctaggcatcacaggaaaaggcctcatgttgccccaccactaccaccaccatcatcatcagaaagacaaggttctacttttctctactgaccaattgagattgcaaatcttagtattgttagcactgaaggacacaacaataatagacgcgtttgtgcctgcaatgtaacagattgcagtgggatttcctgtactgctccactcacatctactccaatcggctccccctgtggctgcgtatatcccatgcaaattcaacttgatcttgtagtagcaccatatcagttgtttccaagaattgatgagttagaaattgagattgcagcaggaacatttctgaaacagagtcaagttcggataatgggtgctgggagtagtcttcaagatcctgaaaaaactactgtcaccgttgatttggtgccactaggtcagaagtttgataggacttcagccttactgactagcaacagatttttgcaaaagaaggtgccaataaactcgtccatatttggtgattataacgtaatatatgttcattatcctggtgagtgacataTttttttgttgacatcaacttcaatagtataattcccagtattgctgtatgtaatcatagaaattttgcaggcctgccttctttggtccctagtgttccaggatccttgggcccaataagcagtagccaatacccctttagtgcaaatgtacacaatagaagacatcagaagattaactctaaaagtgttgccataattgcattatcagctgttgtgcttgtattaatgagctttggcatttgcatcatatggaaatataaaggatttgaaaagtctcgtggcactggtcgtgtttcgaattcgtcagccacaagaaaaacaggtaacttttggcagtcctggtacatatgctaccgttataatatgtcctgttatatccattttgcatttagacaccctctgttctcgaataactaatactgttgaactgttgactattggcatctcactttgatcacaaattacttttaaactatgagattacgatgaatgaaatttgtatgtttatacttgtgatgccacacactttgacaatataacatattttcaagtatttattttattttattttattttttgctaaaggaagaagtggtcaaagtttgaaaataaatagttccagtatcagttattcgagaatgcagataatgttaatttgcaagttcaattttggcccTttttttTGTGTGATTCAACATGAATAGTAAAACCTTACTTTTTGACTGTGTAATTCCCTTGCTGTTTGTATAACATCTTGTTTCTGTTTCAGGTATGAGGTCATCATTCTCCAGTATGACCAGCTCGACGGCATCTTTTGTTTCAACAATTGCAACATGCCCACCTACAGTTAAGACATTCTCTATTTCTGAGCTTGAAAAGGCCACAGAAAACTTCAGCTTCAACAAAATAATAGGTGAAGGAGGGTATGGCCGTGTTTATCGAGGTACAATTGATGATGAAGTTGATGTTGCAGTCAAATTGCTTACAAGAAAACATCAAAACAGAGATCGTGAGTTTATTGCCGAGGTTGAGATGCTAAGTCGTTTGCATCATCGTAATCTTGTCAAGCTGATCGGTATATGCATTGAACGGAGCACAAGGTGCTTGGTGTTTGAGCTTGTTCCAAACGGAAGTGTGGAGTCTCATCTGCACGGTATGTACACTTATTTAGTCTACACCATTGGCATATAAGAATCTTTGGTACATTTTCAGCACTTTCCTATGCTTCATTATACATTGTTGTGATCTGCATATTTACTTCTGTTTTGATGTTTCAGGTTCTGATAAAATATACGGCCCACTTGATTTTGATACTAGAATGAAAATAGCCCTTGGTGCAGCAAGGGGTCTGGCCTACCTACATGAGGATGCCAATCCCCATGTTATACACCGTGATTTCAAGGCCAGCAACGTTCTTTTGGAAAATGATTTCACTCCCAAGGTTGCGGATTTCGGGTTGGCAAAGGAAGCCTCAGAAGGAATGGACCATATatttctactcaggtcatggggacttttgggtaagtcgcattcttaccatattcacctgtggctattatatcaccccaaaacacactaaatttgtaaggagaaaaagaagaagataatttagtcatacactagtacaccacagtagattatcaatcttgtaggatcgaatcacaagaactaagccaaccagagggggggcgggggtgaatggttggtataccccaaaacccaaacttttagcggaaataaaagttaccctcaaattcgatgtagatcggactgaacgaggttgatccgccggtctgaccgcgcttgtgccgctggtctgaccagtgttgatcgcccggttcaaaagcctgaagatcgcctgccgcgcctgaagtcgtagcaggtctgactgcctctcctccgtcggtctgaccgtcgctatgtcgtcggttagaccgccgaacctgatgAaacacaaatcgaagaactcttaaagtagatgacaactttattgcttccctctgtgtttacaaagtgcaccaacaacactccttacaaaaatttcgactaaactcgaaaccctaactaaactatcaactcaattgctctcaacagcgataccgggaaacctcacactccctctctatttatacccaaggtaggcagcctaaagccacgaaccaaattcatactagaagtcctaatcaccttaggaaaccctctagtacaagaaacaaactttacataaccaatcataccaaatttggactcctttcaaattcgactccgcatcccatacgcacacaatacctccatcgtatgccatatggaatctttaccaaccacgtgcattgaactctagccttagtatctcgcatgatatctgaccaccacggacatcgccttaccaccaagtcgactcccggtccaacttgactctctcgaggcatcgagtcacctacacatgaaacaaacaaagaaaccatattccgagaccaagctatccccaacttgactcattagtagcaaacaacagtattacatacgcatagtatccttctagaagccataaccatgaaacaatcacggatatccaaacaaacaaactaaaaccgacacagtgtcggccggccagactgcgggctagccggtctgactgctcaatcatcaccggtccgaccggcacacactgcccggtctgaccggacccaaaacacagcagatcacctgtgaaatccaatcatcttcaaaaccacttcgtaaataaatttcaaatatcaaaaccaataaacgtcaatgccaattgttcatcacagaataacaatcaaaaacacatttgattttacaaatcttgattgtagtgataaattaaatatttcaataaataaattaataattaataaagctgtgatctaaacaatacaatagacgaaagctttctgagaaatcgtattagcaaataattaacggcgatgatattgtgaataataagctgaaaagaaagtttaacttttgatcgatttctttttgtcatggtcttcaggtacgttgccccggagtatgcgatgaccGggcatctcctggtgaaaagcgacgtgtacagctacggtgtcgtgctgctggagctcctctcggggaggaagccggtggacatgacgcagccgccggggtcggagaacctcgtcacctgggcgcgccccctcctcaccgaccgggacggcctccagcagctggtcgacccgtcgatgccggcggcgagctacggcttcgagaagctggccaaggcggcggccatcgcgtccatgtgcgtgcacgtcgaggcgtcgcaccggccgttcatgggcgaggtcgtgcaggccctgaagctcatctacaacggcaacaacgacgacacctgcaccagcggctcgttcggcggcggcggcggcgaggagtacgaggacgaggaggcgtcgtcgccgtggaacaaccgctcgtggagccacgacttcgccgcgacgccgccgccggcgtcgcgcaggctggcgttcccgcgggctccggcccgcccgacgacgatggactacagctcggacccggccgacggggcggcggggacgtcgtcggcgtcggcgcggcggcagcggtcgacgtcgagcctggtgctggacaagatcgagtcgctggcggcgtacgactggtccggcccgctgagggccagcagggggaggaacttctacaggctgaggggaagcatgagcgagcatggcggccatccttccgaagattgctccatggagggctactggatgtagtagctaaagctgagtgatgatgatgatgatcagatgttgtctgcagaattgcagattgccttccatttcttgtcatgttcttcagttaactgtatagttttctgctcatttgatgatgataggattttgatatgattgatgccatgctctgaacaacaatcaccacaccacccctggtctggccctcattttttccatgtagtggatgaacgcactaatcatcatatcattatggcattttgcaacattcattgcactagaatttagcattagtctaggcagtatcaaacaagacattagagcatgttgccatgtacatgaacaaatggatagcacaacaaaaaaaagtgccttaactactcaactagct

More
CDS seq

atgccgccgcggcgagcggcgctgctcctcctcgctctcgccgtgtatgtgccactgggaacggcaagctcaacaactatcgcgtcgtacttacttgggttatggagtagagcacatcggcattctcttcctgcccctgctccagctccagctccagctccagctccagcccctgaaactcaccgacctggtattagacacccagtgcctaggcatcacaggaaaaggcctcatgttgccccaccactaccaccaccatcatcatcagaaagacaagtagcaccatatcagttgtttccaagaattgatgagttagaaattgagattgcagcaggaacatttctgaaacagagtcaagttcggataatgggtgctgggagtagtcttcaagatcctgaaaaaactactgtcaccgttgatttggtgccactaggtcagaagtttgataggacttcagccttactgactagcaacagatttttgcaaaagaaggtgccaataaactcgtccatatttggtgattataacgtaatatatgttcattatcctggcctgccttctttggtccctagtgttccaggatccttgggcccaataagcagtagccaatacccctttagtgcaaatgtacacaatagaagacatcagaagattaactctaaaagtgttgccataattgcattatcagctgttgtgcttgtattaatgagctttggcatttgcatcatatggaaatataaaggatttgaaaagtctcgtggcactggtcgtgtttcgaattcgtcagccacaagaaaaacagGTATGAGGTCATCATTCTCCAGTATGACCAGCTCGACGGCATCTTTTGTTTCAACAATTGCAACATGCCCACCTACAGTTAAGACATTCTCTATTTCTGAGCTTGAAAAGGCCACAGAAAACTTCAGCTTCAACAAAATAATAGGTGAAGGAGGGTATGGCCGTGTTTATCGAGGTACAATTGATGATGAAGTTGATGTTGCAGTCAAATTGCTTACAAGAAAACATCAAAACAGAGATCGTGAGTTTATTGCCGAGGTTGAGATGCTAAGTCGTTTGCATCATCGTAATCTTGTCAAGCTGATCGGTATATGCATTGAACGGAGCACAAGGTGCTTGGTGTTTGAGCTTGTTCCAAACGGAAGTGTGGAGTCTCATCTGCACGGTTCTGATAAAATATACGGCCCACTTGATTTTGATACTAGAATGAAAATAGCCCTTGGTGCAGCAAGGGGTCTGGCCTACCTACATGAGGATGCCAATCCCCATGTTATACACCGTGATTTCAAGGCCAGCAACGTTCTTTTGGAAAATGATTTCACTCCCAAGGTTGCGGATTTCGGGTTGGCAAAGGAAGCCTCAGAAGGAATGGACCATATatttctactcaggtacgttgccccggagtatgcgatgaccGggcatctcctggtgaaaagcgacgtgtacagctacggtgtcgtgctgctggagctcctctcggggaggaagccggtggacatgacgcagccgccggggtcggagaacctcgtcacctgggcgcgccccctcctcaccgaccgggacggcctccagcagctggtcgacccgtcgatgccggcggcgagctacggcttcgagaagctggccaaggcggcggccatcgcgtccatgtgcgtgcacgtcgaggcgtcgcaccggccgttcatgggcgaggtcgtgcaggccctgaagctcatctacaacggcaacaacgacgacacctgcaccagcggctcgttcggcggcggcggcggcgaggagtacgaggacgaggaggcgtcgtcgccgtggaacaaccgctcgtggagccacgacttcgccgcgacgccgccgccggcgtcgcgcaggctggcgttcccgcgggctccggcccgcccgacgacgatggactacagctcggacccggccgacggggcggcggggacgtcgtcggcgtcggcgcggcggcagcggtcgacgtcgagcctggtgctggacaagatcgagtcgctggcggcgtacgactggtccggcccgctgagggccagcagggggaggaacttctacaggctgaggggaagcatgagcgagcatggcggccatccttccgaagattgctccatggagggctactggatgtag

More
Protein seq

MPPRRAALLLLALAVYVPLGTASSTTIASYLLGLWSRAHRHSLPAPAPAPAPAPAPAPETHRPGIRHPVPRHHRKRPHVAPPLPPPSSSERQVAPYQLFPRIDELEIEIAAGTFLKQSQVRIMGAGSSLQDPEKTTVTVDLVPLGQKFDRTSALLTSNRFLQKKVPINSSIFGDYNVIYVHYPGLPSLVPSVPGSLGPISSSQYPFSANVHNRRHQKINSKSVAIIALSAVVLVLMSFGICIIWKYKGFEKSRGTGRVSNSSATRKTGMRSSFSSMTSSTASFVSTIATCPPTVKTFSISELEKATENFSFNKIIGEGGYGRVYRGTIDDEVDVAVKLLTRKHQNRDREFIAEVEMLSRLHHRNLVKLIGICIERSTRCLVFELVPNGSVESHLHGSDKIYGPLDFDTRMKIALGAARGLAYLHEDANPHVIHRDFKASNVLLENDFTPKVADFGLAKEASEGMDHIFLLRYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMTQPPGSENLVTWARPLLTDRDGLQQLVDPSMPAASYGFEKLAKAAAIASMCVHVEASHRPFMGEVVQALKLIYNGNNDDTCTSGSFGGGGGEEYEDEEASSPWNNRSWSHDFAATPPPASRRLAFPRAPARPTTMDYSSDPADGAAGTSSASARRQRSTSSLVLDKIESLAAYDWSGPLRASRGRNFYRLRGSMSEHGGHPSEDCSMEGYWM

Function Receptor-like serine/threonine-protein kinase ALE2 [UniProtKB/Swiss-Prot:Q8RWW0]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_04g0019170 OsGoSa_04g0019170.01 Chr04 27539392 27545628 + NAM
CDS seq

atgccgccgcggcgagcggcgctgctcctcctcgctctcgccgtgtatgtgccactgggaacggcaagctcaacaactatcgcgtcgtacttacttgggttatggagtagagcacatcggcattctcttcctgcccctgctccagctccagctccagctccagctccagcccctgaaactcaccgacctggtattagacacccagtgcctaggcatcacaggaaaaggcctcatgttgccccaccactaccaccaccatcatcatcagaaagacaagtagcaccatatcagttgtttccaagaattgatgagttagaaattgagattgcagcaggaacatttctgaaacagagtcaagttcggataatgggtgctgggagtagtcttcaagatcctgaaaaaactactgtcaccgttgatttggtgccactaggtcagaagtttgataggacttcagccttactgactagcaacagatttttgcaaaagaaggtgccaataaactcgtccatatttggtgattataacgtaatatatgttcattatcctggcctgccttctttggtccctagtgttccaggatccttgggcccaataagcagtagccaatacccctttagtgcaaatgtacacaatagaagacatcagaagattaactctaaaagtgttgccataattgcattatcagctgttgtgcttgtattaatgagctttggcatttgcatcatatggaaatataaaggatttgaaaagtctcgtggcactggtcgtgtttcgaattcgtcagccacaagaaaaacagGTATGAGGTCATCATTCTCCAGTATGACCAGCTCGACGGCATCTTTTGTTTCAACAATTGCAACATGCCCACCTACAGTTAAGACATTCTCTATTTCTGAGCTTGAAAAGGCCACAGAAAACTTCAGCTTCAACAAAATAATAGGTGAAGGAGGGTATGGCCGTGTTTATCGAGGTACAATTGATGATGAAGTTGATGTTGCAGTCAAATTGCTTACAAGAAAACATCAAAACAGAGATCGTGAGTTTATTGCCGAGGTTGAGATGCTAAGTCGTTTGCATCATCGTAATCTTGTCAAGCTGATCGGTATATGCATTGAACGGAGCACAAGGTGCTTGGTGTTTGAGCTTGTTCCAAACGGAAGTGTGGAGTCTCATCTGCACGGTTCTGATAAAATATACGGCCCACTTGATTTTGATACTAGAATGAAAATAGCCCTTGGTGCAGCAAGGGGTCTGGCCTACCTACATGAGGATGCCAATCCCCATGTTATACACCGTGATTTCAAGGCCAGCAACGTTCTTTTGGAAAATGATTTCACTCCCAAGGTTGCGGATTTCGGGTTGGCAAAGGAAGCCTCAGAAGGAATGGACCATATatttctactcaggtacgttgccccggagtatgcgatgaccGggcatctcctggtgaaaagcgacgtgtacagctacggtgtcgtgctgctggagctcctctcggggaggaagccggtggacatgacgcagccgccggggtcggagaacctcgtcacctgggcgcgccccctcctcaccgaccgggacggcctccagcagctggtcgacccgtcgatgccggcggcgagctacggcttcgagaagctggccaaggcggcggccatcgcgtccatgtgcgtgcacgtcgaggcgtcgcaccggccgttcatgggcgaggtcgtgcaggccctgaagctcatctacaacggcaacaacgacgacacctgcaccagcggctcgttcggcggcggcggcggcgaggagtacgaggacgaggaggcgtcgtcgccgtggaacaaccgctcgtggagccacgacttcgccgcgacgccgccgccggcgtcgcgcaggctggcgttcccgcgggctccggcccgcccgacgacgatggactacagctcggacccggccgacggggcggcggggacgtcgtcggcgtcggcgcggcggcagcggtcgacgtcgagcctggtgctggacaagatcgagtcgctggcggcgtacgactggtccggcccgctgagggccagcagggggaggaacttctacaggctgaggggaagcatgagcgagcatggcggccatccttccgaagattgctccatggagggctactggatgtag

More
Protein seq

MPPRRAALLLLALAVYVPLGTASSTTIASYLLGLWSRAHRHSLPAPAPAPAPAPAPAPETHRPGIRHPVPRHHRKRPHVAPPLPPPSSSERQVAPYQLFPRIDELEIEIAAGTFLKQSQVRIMGAGSSLQDPEKTTVTVDLVPLGQKFDRTSALLTSNRFLQKKVPINSSIFGDYNVIYVHYPGLPSLVPSVPGSLGPISSSQYPFSANVHNRRHQKINSKSVAIIALSAVVLVLMSFGICIIWKYKGFEKSRGTGRVSNSSATRKTGMRSSFSSMTSSTASFVSTIATCPPTVKTFSISELEKATENFSFNKIIGEGGYGRVYRGTIDDEVDVAVKLLTRKHQNRDREFIAEVEMLSRLHHRNLVKLIGICIERSTRCLVFELVPNGSVESHLHGSDKIYGPLDFDTRMKIALGAARGLAYLHEDANPHVIHRDFKASNVLLENDFTPKVADFGLAKEASEGMDHIFLLRYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMTQPPGSENLVTWARPLLTDRDGLQQLVDPSMPAASYGFEKLAKAAAIASMCVHVEASHRPFMGEVVQALKLIYNGNNDDTCTSGSFGGGGGEEYEDEEASSPWNNRSWSHDFAATPPPASRRLAFPRAPARPTTMDYSSDPADGAAGTSSASARRQRSTSSLVLDKIESLAAYDWSGPLRASRGRNFYRLRGSMSEHGGHPSEDCSMEGYWM

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 2.323120 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0509000 RBH 0.000000 0.097427 1.478315
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g43020 RBH 0.000000 0.069226 0.358467
Nipponbare | IRGSP 1.0 | RAP-db Os04g0509000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0019490 RBH 0.0 1.443421 3.693775
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0020270 RBH 0.0 0.000000 0.290615
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0019990 RBH 0.0 0.665369 5.352133
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0019700 RBH 0.0 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0019910 RBH 0.0 1.221904 4.398739
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0399300 RBH 1.8208075 1.206045 2.6640755
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0018710 RBH 0.0 0.000000 0.325444
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0399400 RBH 2.4982725 0.416808 12.121208
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0019190 RBH 0.030346 0.027204 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0019040 RBH 0.0 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0026410 SBH 12.609907 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0019540 RBH 0.0 0.0 0.124813
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0019710 RBH 0.0 0.507938 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G018990 RBH 0.0 0.000000 2.506763
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0018930 RBH 0.0 0.0 0.607755
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.