Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_03g0016940 | OGI:03033590 | 15/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr03:13301739-13304536 | ||||||||
| Gene Symbol | CIPK10, OsCIPK10, OsSnRK3.12, SnRK3.12 | ||||||||||
| DNA seq | tgaataaaacatgttttcaattaaatggtcaatacaattatcgtttcatactgaacacatgataatgaaaaatcaaatgacaaatttttttagaaaagtacattattgattactaatagcacatacaacacatcaacacattgccacaatctctactgtcatttcacttgtcaaaatatttaacattaagactgttcgttcaatgattgtggttgtggctgctcaccttgccaagcccatacaatatcctttagtgctggtctcatctcttgtttgaccttttgatactcaagtgtatcaccatttatcttcgtaaattccactaaatgaaaatctggtgtgatctgaaatatttcagcattgatggacattacacctttccttcctggttttgatccttccatctttaacaaaccaccatttttcttcaagaattttaatcgtaaattcttcgcaacatcctcaagctttttggtgattgtcgtagctgtgttagtggatgtaaattttgattcctctttgttgTtttcatcttcaaacatagcagaaagatcaaatcctgatgaaagagaaataatatcaaaagcatttaagctagtaagattttctgcttcttgttttccttcatttatattgttgcttaaattaccaaatgttgaatccatgtcaacatgcacaactttatcaactttatctgttggtatggtcttgttaagtagatatgaatcaagacctactctaaaccaaggatcttccataatttctgaaactgagatccgtgtcgcagggtttggatcaagaatacgtcgcaaaagctttcggatatcagaagaaaaccaacttggccatttgaattccgctttgcatatcttcttatacatgtttatcacatttttatcttgaaatgggagataaccagccaatagtacataaagaatcactccacaagcccatacgtcagccttcgcaccatcatatccttttctgttaatcacttctggagcaacatatgcaggagttccacaagttgtgtggagcaacccatcttgtctcttacattctgcaagtgcactcaaaccaaagtctgagattttcaaatttcgattttcatcaagaagaaggttttctggctttagatcacgatgataaacccctctgctatgacaaaagtcaatagcactaattaactgctgaaagtacttccgtgcaacttcttcctttagtcttccacgtcgaaccttgttgaataactctccccctttcacatactctaggataaaatatatcttagttttggtagccatcacctcatacaattgaacaatgcacggatgtcttactaggttcatcactgaaaTCtctcttcttatttgatccataagctcacatttcaatatcttttctttgtcaatcaccttgattgcaacactttgtgaattcttaatattacggccatggtaaactttagcgaaacttccttgcccaagtaattttcctatctcatatctcttcatcaaaatattccccttttgttctaccatcttatcaaatgccttatgtattcagaaagcactaatcatgtaacttagtgatgatgattgatgagggagtatcagatgagagaggcaataaatgaaaaataatttcaaccgtccccaacaagatggtaatctaacatgatggttgaactgccacatctagccccatcgtgcaaatgcacaaggagcacttgctgtgcataaacccgtacttcactatcatcaagagcacacaaagcataaatattttgagctaccttgccaattcccacacaaggtagctctctatcatagaagcacatcttccggcattccttttgttttgtgcttctagcaaaaagcctaatactgccaataaaatgaaataaatggtaaggtacacattactgaatagtgaattaatagtactgcattataactaacAaaagaaatcttcccatgtatgttaataTtttgttgttttcacgagaatgtaaagagcaaatctgtttccttccaaagcaaaaggaaacatttggataaattcttccagagtcccacatagtatgattctcttcgtctggtgctagccagatctacaaaagtcactatgtctacattctacaaaaaaaaaatcaacgaaattcttcctaagaaaattctaaaaaggaacagtataacaatcctataaatgaaatgaaaggatattagcgctaggtcagttcagaatcatgacgggaccaactaaacaccactcactccggcagaagatagaaatcaacaaagtcctcaaatcatatgcccaaggacaagcaaaatacatgtttaaTaaccctctaaagaaaggttactgacgaacccatgccactaaaccttttaataagtctaagaaagaactgctactacagagtagcagagcacacccgtgtaaccgtgttctacatcatgaccaaggattagattcctaattaactgctcactaaaccacagttcttcctagggtagtaaatcttctatcttttgggtgcacatacgagtaaaaaagaaacagatcaaaacgaagaagaactcggatgtgagtggcagaatcggtacctgatcccggctctgtccgggaaggataaagagatcggaattaaccctgccgatcgagcagtCccccctaaaatcaagccctccaactcaaagaagatgaaaaagaaaaatatccagagaagaatgggggcagccgaggagtaggagtgagacggaggaaacgaatcaggagccaccaaaaacgat
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| CDS seq | atggtagaacaaaaggggaatattttgatgaagagatatgagataggaaaattacttgggcaaggaagtttcgctaaagtttaccatggccgtaatattaagaattcacaaagtgttgcaatcaaggtgattgacaaagaaaagatattgaaatgtgagcttatggatcaaataagaagagaGAtttcagtgatgaacctagtaagacatccgtgcattgttcaattgtatgaggtgatggctaccaaaactaagatatattttatcctagagtatgtgaaagggggagagttattcaacaaggttcgacgtggaagactaaaggaagaagttgcacggaagtactttcagcagttaattagtgctattgacttttgtcatagcagaggggtttatcatcgtgatctaaagccagaaaaccttcttcttgatgaaaatcgaaatttgaaaatctcagactttggtttgagtgcacttgcagaatgtaagagacaagatgggttgctccacacaacttgtggaactcctgcatatgttgctccagaagtgattaacagaaaaggatatgatggtgcgaaggctgacgtatgggcttgtggagtgattctttatgtactattggctggttatctcccatttcaagataaaaatgtgataaacatgtataagaagatatgcaaagcggaattcaaatggccaagttggttttcttctgatatccgaaagcttttgcgacgtattcttgatccaaaccctgcgacacggatctcagtttcagaaattatggaagatccttggtttagagtaggtcttgattcatatctacttaacaagaccataccaacagataaagttgataaagttgtgcatgttgacatggattcaacatttggtaatttaagcaacaatataaatgaaggaaaacaagaagcagaaaatcttactagcttaaatgcttttgatattatttctctttcatcaggatttgatctttctgctatgtttgaagatgaaaAcaacaaagaggaatcaaaatttacatccactaacacagctacgacaatcaccaaaaagcttgaggatgttgcgaagaatttacgattaaaattcttgaagaaaaatggtggtttgttaaagatggaaggatcaaaaccaggaaggaaaggtgtaatgtccatcaatgctgaaatatttcagatcacaccagattttcatttagtggaatttacgaagataaatggtgatacacttgagtatcaaaaggtcaaacaagagatgagaccagcactaaaggatattgtatgggcttggcaaggtgagcagccacaaccacaatcattgaacgaacagtcttaa
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| Protein seq | MVEQKGNILMKRYEIGKLLGQGSFAKVYHGRNIKNSQSVAIKVIDKEKILKCELMDQIRREISVMNLVRHPCIVQLYEVMATKTKIYFILEYVKGGELFNKVRRGRLKEEVARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENRNLKISDFGLSALAECKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADVWACGVILYVLLAGYLPFQDKNVINMYKKICKAEFKWPSWFSSDIRKLLRRILDPNPATRISVSEIMEDPWFRVGLDSYLLNKTIPTDKVDKVVHVDMDSTFGNLSNNINEGKQEAENLTSLNAFDIISLSSGFDLSAMFEDENNKEESKFTSTNTATTITKKLEDVAKNLRLKFLKKNGGLLKMEGSKPGRKGVMSINAEIFQITPDFHLVEFTKINGDTLEYQKVKQEMRPALKDIVWAWQGEQPQPQSLNEQS |
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| Function | CBL-interacting protein kinase 10 [UniProtKB/Swiss-Prot:Q10LQ2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_03g0016940 | OsGoSa_03g0016940.02 | Chr03 | 13301739 | 13303774 | - | NAM | ||
| CDS seq | atggtagaacaaaaggggaatattttgatgaagagatatgagataggaaaattacttgggcaaggaagtttcgctaaagtttaccatggccgtaatattaagaattcacaaagtgttgcaatcaaggtgattgacaaagaaaagatattgaaatgtgagcttatggatcaaataagaagagaGAtttcagtgatgaacctagtaagacatccgtgcattgttcaattgtatgaggtgatggctaccaaaactaagatatattttatcctagagtatgtgaaagggggagagttattcaacaaggttcgacgtggaagactaaaggaagaagttgcacggaagtactttcagcagttaattagtgctattgacttttgtcatagcagaggggtttatcatcgtgatctaaagccagaaaaccttcttcttgatgaaaatcgaaatttgaaaatctcagactttggtttgagtgcacttgcagaatgtaagagacaagatgggttgctccacacaacttgtggaactcctgcatatgttgctccagaagtgattaacagaaaaggatatgatggtgcgaaggctgacgtatgggcttgtggagtgattctttatgtactattggctggttatctcccatttcaagataaaaatgtgataaacatgtataagaagatatgcaaagcggaattcaaatggccaagttggttttcttctgatatccgaaagcttttgcgacgtattcttgatccaaaccctgcgacacggatctcagtttcagaaattatggaagatccttggtttagagtaggtcttgattcatatctacttaacaagaccataccaacagataaagttgataaagttgtgcatgttgacatggattcaacatttggtaatttaagcaacaatataaatgaaggaaaacaagaagcagaaaatcttactagcttaaatgcttttgatattatttctctttcatcaggatttgatctttctgctatgtttgaagatgaaaAcaacaaagaggaatcaaaatttacatccactaacacagctacgacaatcaccaaaaagcttgaggatgttgcgaagaatttacgattaaaattcttgaagaaaaatggtggtttgttaaagatggaaggatcaaaaccaggaaggaaaggtgtaatgtccatcaatgctgaaatatttcagatcacaccagattttcatttagtggaatttacgaagataaatggtgatacacttgagtatcaaaaggtcaaacaagagatgagaccagcactaaaggatattgtatgggcttggcaaggtgagcagccacaaccacaatcattgaacgaacagtcttaa
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| Protein seq | MVEQKGNILMKRYEIGKLLGQGSFAKVYHGRNIKNSQSVAIKVIDKEKILKCELMDQIRREISVMNLVRHPCIVQLYEVMATKTKIYFILEYVKGGELFNKVRRGRLKEEVARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENRNLKISDFGLSALAECKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADVWACGVILYVLLAGYLPFQDKNVINMYKKICKAEFKWPSWFSSDIRKLLRRILDPNPATRISVSEIMEDPWFRVGLDSYLLNKTIPTDKVDKVVHVDMDSTFGNLSNNINEGKQEAENLTSLNAFDIISLSSGFDLSAMFEDENNKEESKFTSTNTATTITKKLEDVAKNLRLKFLKKNGGLLKMEGSKPGRKGVMSINAEIFQITPDFHLVEFTKINGDTLEYQKVKQEMRPALKDIVWAWQGEQPQPQSLNEQS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_03g0016940 | OsGoSa_03g0016940.01 | Chr03 | 13301739 | 13304536 | - | NAM | ||
| CDS seq | atggtagaacaaaaggggaatattttgatgaagagatatgagataggaaaattacttgggcaaggaagtttcgctaaagtttaccatggccgtaatattaagaattcacaaagtgttgcaatcaaggtgattgacaaagaaaagatattgaaatgtgagcttatggatcaaataagaagagaGAtttcagtgatgaacctagtaagacatccgtgcattgttcaattgtatgaggtgatggctaccaaaactaagatatattttatcctagagtatgtgaaagggggagagttattcaacaaggttcgacgtggaagactaaaggaagaagttgcacggaagtactttcagcagttaattagtgctattgacttttgtcatagcagaggggtttatcatcgtgatctaaagccagaaaaccttcttcttgatgaaaatcgaaatttgaaaatctcagactttggtttgagtgcacttgcagaatgtaagagacaagatgggttgctccacacaacttgtggaactcctgcatatgttgctccagaagtgattaacagaaaaggatatgatggtgcgaaggctgacgtatgggcttgtggagtgattctttatgtactattggctggttatctcccatttcaagataaaaatgtgataaacatgtataagaagatatgcaaagcggaattcaaatggccaagttggttttcttctgatatccgaaagcttttgcgacgtattcttgatccaaaccctgcgacacggatctcagtttcagaaattatggaagatccttggtttagagtaggtcttgattcatatctacttaacaagaccataccaacagataaagttgataaagttgtgcatgttgacatggattcaacatttggtaatttaagcaacaatataaatgaaggaaaacaagaagcagaaaatcttactagcttaaatgcttttgatattatttctctttcatcaggatttgatctttctgctatgtttgaagatgaaaAcaacaaagaggaatcaaaatttacatccactaacacagctacgacaatcaccaaaaagcttgaggatgttgcgaagaatttacgattaaaattcttgaagaaaaatggtggtttgttaaagatggaaggatcaaaaccaggaaggaaaggtgtaatgtccatcaatgctgaaatatttcagatcacaccagattttcatttagtggaatttacgaagataaatggtgatacacttgagtatcaaaaggtcaaacaagagatgagaccagcactaaaggatattgtatgggcttggcaaggtgagcagccacaaccacaatcattgaacgaacagtcttaa
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| Protein seq | MVEQKGNILMKRYEIGKLLGQGSFAKVYHGRNIKNSQSVAIKVIDKEKILKCELMDQIRREISVMNLVRHPCIVQLYEVMATKTKIYFILEYVKGGELFNKVRRGRLKEEVARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENRNLKISDFGLSALAECKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADVWACGVILYVLLAGYLPFQDKNVINMYKKICKAEFKWPSWFSSDIRKLLRRILDPNPATRISVSEIMEDPWFRVGLDSYLLNKTIPTDKVDKVVHVDMDSTFGNLSNNINEGKQEAENLTSLNAFDIISLSSGFDLSAMFEDENNKEESKFTSTNTATTITKKLEDVAKNLRLKFLKKNGGLLKMEGSKPGRKGVMSINAEIFQITPDFHLVEFTKINGDTLEYQKVKQEMRPALKDIVWAWQGEQPQPQSLNEQS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 82.049553 | 82.832596 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0339900 | RBH | 19.059217 | 15.735124 | 2.354243 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g22050 | RBH | 13.053969 | 10.707741 | 0.616559 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0339900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0017140 | RBH | 13.228070 | 65.694160 | 7.846784 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016980 | RBH | 2.201808 | 4.567225 | 9.625064 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016990 | RBH | 21.433187 | 28.735880 | 25.949507 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016990 | RBH | 4.247132 | 1.038970 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0016780 | RBH | 96.761818 | 35.020367 | 22.909048 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0191200 | SBH | 22.5667955 | 2.2451185 | 22.3552645 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0016640 | RBH | 10.382624 | 6.755188 | 1.004626 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0213400 | RBH | 52.5826495 | 306.434433 | 5.4001535 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0016860 | RBH | 4.395079 | 1.401193 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0016900 | RBH | 9.324716 | 49.795002 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027540 | RBH | 23.957783 | 163.959976 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0016820 | RBH | 30.271080 | 22.728872 | 1.641972 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0016750 | RBH | 11.631639 | 54.884445 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G016700 | RBH | 18.531582 | 10.869464 | 4.352869 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0016680 | RBH | 45.474098 | 442.196045 | 12.022613 |
