Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_12g0007740 | OGI:12007920 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr12:6788509-6789115 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgccacccaactgccccctcccatttctgcttccccggtttcgttttctttccttggaagcttcgctgccgtgctctcctttcttcccaattgttttcactttgttgtcgtccatggagaccgcgaggtgaaatacggccaattttttcttcatttgaaggatctctttctccctgcttactggatggctacctgttgtagaaacactttcgttgtttgcgccgtcgccgtcgtgggtgtctaggagacgaaggtattctccgtttagaccccggcgacctaatccttccgttcttgctgtcccaaggagttctttgtgccgtcaagccgccctctggttcttccatccgtcgtcttcaggccgtcaagccgccctctggttcttccatccgtcgtcttcaggcctccccttttgaaggtgattccttgctacggttttacatcctttactcgctttatggtctccgcttccgttatgtgtgtatttatgttgtgtccattgggaagaagagagtgggtagttgggacggacgtcgatggtcaacgttcctcttttttccttttgttgtccacaggccagagcatgtatgctatggctgtccctag
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| CDS seq | atgccacccaactgccccctcccatttctgcttccccggtttcgttttctttccttggaagcttcgctgccgtgctctcctttcttcccaattgttttcactttgttgtcgtccatggagaccgcgagaaacactttcgttgtttgcgccgtcgccgtcgtgggagacgaaggtattctccgtttagaccccggcgacctaatccttccgttcttgctgtcccaaggagttctttgtgccgtcaagccgccctctggttcttccatccgtcgtcttcaggccgtcaagccgccctctggttcttccatccgtcgtcttcaggcctccccttttgaaggtgattccttgctacggttttacatcctttactcgctttatggtctccgcttccgttatgtgtgtatttatgttgtgtccattgggaagaagagagtgggtagttgggacggacgtcgatggtcaacgttcctcttttttccttttgttgtccacaggccagagcatgtatgctatggctgtccctag
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| Protein seq | MPPNCPLPFLLPRFRFLSLEASLPCSPFFPIVFTLLSSMETARNTFVVCAVAVVGDEGILRLDPGDLILPFLLSQGVLCAVKPPSGSSIRRLQAVKPPSGSSIRRLQASPFEGDSLLRFYILYSLYGLRFRYVCIYVVSIGKKRVGSWDGRRWSTFLFFPFVVHRPEHVCYGCP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_12g0007740 | OsCMeo_12g0007740.01 | Chr12 | 6788509 | 6789115 | + | NAM | ||
| CDS seq | atgccacccaactgccccctcccatttctgcttccccggtttcgttttctttccttggaagcttcgctgccgtgctctcctttcttcccaattgttttcactttgttgtcgtccatggagaccgcgagaaacactttcgttgtttgcgccgtcgccgtcgtgggagacgaaggtattctccgtttagaccccggcgacctaatccttccgttcttgctgtcccaaggagttctttgtgccgtcaagccgccctctggttcttccatccgtcgtcttcaggccgtcaagccgccctctggttcttccatccgtcgtcttcaggcctccccttttgaaggtgattccttgctacggttttacatcctttactcgctttatggtctccgcttccgttatgtgtgtatttatgttgtgtccattgggaagaagagagtgggtagttgggacggacgtcgatggtcaacgttcctcttttttccttttgttgtccacaggccagagcatgtatgctatggctgtccctag
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| Protein seq | MPPNCPLPFLLPRFRFLSLEASLPCSPFFPIVFTLLSSMETARNTFVVCAVAVVGDEGILRLDPGDLILPFLLSQGVLCAVKPPSGSSIRRLQAVKPPSGSSIRRLQASPFEGDSLLRFYILYSLYGLRFRYVCIYVVSIGKKRVGSWDGRRWSTFLFFPFVVHRPEHVCYGCP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0159100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0159100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0007570 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0007660 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0004200 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0004030 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0013020 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0051300 | SBH | 0.0084155 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0013190 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0013160 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0013500 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0004220 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0004170 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0004120 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G004040 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0004250 | SBH | 0.0 | 0.0 | 0.0 |
