Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0019880 | OGI:11068270 | 9/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:23301947-23302320 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGTGATTGAAGGCAAGGTGTTCGGAGGTCTTTAGAGGTTCTCCCTTGATTGCCCCGTTCCATGGCTAACTTTTAAAGAAGGGACCATGCCGATACTTGAGTACCTGCAACTAAATATTTGCTCAGTCCCAATGAATCAAGTGAACGTTTTTCCATTGGGCCTTGCCAATCTCCGGAGCATCACGGATTCACGGAGGTAGTCATCTATTATAGTGAACGGTGTGGCAATAGCTCAAGCATCAAGATGACAGTCGATGCAGTGAGACAATAGGTTGCCAGGCATCCTGACGGCCTGATCAACCTTGTCATCAATGGCAAACAAGAAGACATTGAAGCATTGGACGAGGCCTGTGGGGGCAGAGAGGGCAACTGA |
||||||||||
| CDS seq | ATGGTGATTGAAGGCAAGAGGTTCTCCCTTGATTGCCCCGTTCCATGGCTAACTTTTAAAGAAGGGACCATGCCGATACTTGAGTACCTGCAACTAAATATTTGCTCAGTCCCAATGAATCAAGTGAACGTTTTTCCATTGGGCCTTGCCAATCTCCGGAGCATCACGGATTCACGGAGGCATCCTGACGGCCTGATCAACCTTGTCATCAATGGCAAACAAGAAGACATTGAAGCATTGGACGAGGCCTGTGGGGGCAGAGAGGGCAACTGA |
||||||||||
| Protein seq | MVIEGKRFSLDCPVPWLTFKEGTMPILEYLQLNICSVPMNQVNVFPLGLANLRSITDSRRHPDGLINLVINGKQEDIEALDEACGGREGN |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0019880 | OsCMeo_11g0019880.01 | Chr11 | 23301947 | 23302320 | + | NAM | ||
| CDS seq | ATGGTGATTGAAGGCAAGAGGTTCTCCCTTGATTGCCCCGTTCCATGGCTAACTTTTAAAGAAGGGACCATGCCGATACTTGAGTACCTGCAACTAAATATTTGCTCAGTCCCAATGAATCAAGTGAACGTTTTTCCATTGGGCCTTGCCAATCTCCGGAGCATCACGGATTCACGGAGGCATCCTGACGGCCTGATCAACCTTGTCATCAATGGCAAACAAGAAGACATTGAAGCATTGGACGAGGCCTGTGGGGGCAGAGAGGGCAACTGA
More
|
|||||||
| Protein seq | MVIEGKRFSLDCPVPWLTFKEGTMPILEYLQLNICSVPMNQVNVFPLGLANLRSITDSRRHPDGLINLVINGKQEDIEALDEACGGREGN |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0605100 | SBH | 3.138117 | 2.327258 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g39190 | SBH | 2.111905 | 0.958553 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0606400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0019960 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0020110 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0019910 | SBH | 0.819825 | 3.687471 | 8.180882 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0019270 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0019810 | SBH | 0.0 | 7.217703 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0358900 | SBH | 1.2529555 | 7.7204685 | 0.67106 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0020420 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0374400 | SBH | 1.6029655 | 17.47533 | 0.5658625 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0020260 | SBH | 0.099495 | 0.394560 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0020280 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0019890 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0019700 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0019810 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G019740 | RBH | 0.000000 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0020130 | RBH | 0.0 | 0.0 | 0.0 |
