Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0017260 | OGI:11061480 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:20347108-20349093 | ||||||||
| Gene Symbol | WAK119, OsWAK119, OsRLCK335, RLCK335 | ||||||||||
| DNA seq | tcatagatgccaacagcctgtgcatccatgcccctgtggtgcatgctgtttccaagcccttcggatcatcccaagttgttcagccacatccttcattgtcggccttatttccatgctaaggcacctcagtgccaacctcccgatgttttcaagaaccacgatatcttttttggctgtaattcctttatcaaacattgcattcccactaccttctgttttataagctttgatgaattcagggatgaggcgaaccgggcagtgtttcttgtcctggtataaaagtttcttcctgctaatgagttctagcaaaataataccaaaaccgtagacatcgctttcagttgtcaggacatcagactgtagaaattttgggtcgatgtagctcggatcatcccttattattttttttggcataagatcacagtacttttcaacgttatcaaaagacaaattgcccttggtaagccttcttgatgatgtaaaacctgagatttttggcattaggtttttgtctaagagtatgttggtcgacctgacatcaccgtgtctcacacagaatggtgacgagtgaaggtgatctaatgcttctgcagtctttaccgtgatcttcaggcgtaaccctagtgggatatcttgtgcactattcagaatgtcgtatagactccctcgatcaacatactcatatactagcatgggaaaatcagcatcaaagcaataccccaaaagttttatgatgccctcgtgaacgatctgggacacaatggatgcttcataaaaaatcatgaagacatcctcatctgaaaggtgacttttcactaccaccaacatattgtcctctagtgttcctttattgtacctaccaatgccagaccctttgtcaccaagaggagatttgtaacgccccatgacttcaaatagattctcctttgtgaaacttctaaaattgtgttgtttagccatctcagattttatttccgaaatggcattccgcctatggttggccgtaggagtagagctgaaaatgcttgtgctttgcttgtaccctttccttaatgcgttcagcattcgtgaggaagaagatttccgagctgcactttcctgcccctccctatgagtttgaagggtccgaaggcgttgagccacatcattaattttagggcgttcttcaatgtccaatgtcagacattcaattgccaattttgctatttcttcaagaacattcatattgcactcctctactatttctgcatcgaacagttccctcagcccttttccgtttgcacaagcttgaccaaaggatataattaagttaacgccgtcctgttttactctttttcgagctatgagttccaaaagaactatcccaaagctataaacatcactctttggggtaagacggccatctctgacatataaagggtccacgtaatcttcacaccccataatatgtaaagtatatcgagtgaggcctccagaaagagattttgagatgccaaaatcggaaactttggcagtaagattggcatctagaagaatgtttccaggcttaatatcaccatgatatacaaggctgtcacttgataaatgcatgtagctcaatgcttctgcacaccctacagcaatgcccaagcgtgtattcaaagggatggaaatttccctgttgcaaagtacatcttcaaggctaccattcaagataaactcagttaccatcattagagtgttttctccaatacaatagcctataagtttcactatattcttatggctcatttgggcatggattctaacctcttccatgaactcttctcttaaatccccacggatatatctctttaccgcaacttgaccatcatcatcatcaaggtcaccgctaaagacttctccaaatccaccttttccaatgagagttctatagttttttgtaattctttttatttcatcttctgtgaatatccgaacattattattatcgtggactttcctcat
More
|
||||||||||
| CDS seq | atgaggaaagtccacgataataataatgttcggatattcacagaagatgaaataaaaagaattacaaaaaactatagaactctcattggaaaaggtggatttggagaagtctttagcggtgaccttgatgatgatgatggtcaagttgcggtaaagagatatatccgtggggatttaagagaagagttcatggaagaggttagaatccatgcccaaatgagccataagaatatagtgaaacttataggctattgtattggagaaaacactctaatgatggtaactgagtttatcttgaatggtagccttgaagatgtactttgcaacagggaaatttccatccctttgaatacacgcttgggcattgctgtagggtgtgcagaagcattgagctacatgcatttatcaagtgacagccttgtatatcatggtgatattaagcctggaaacattcttctagatgccaatcttactgccaaagtttccgattttggcatctcaaaatctctttctggaggcctcactcgatatactttacatattatggggtgtgaagattacgtggaccctttatatgtcagagatggccgtcttaccccaaagagtgatgtttatagctttgggatagttcttttggaactcatagctcgaaaaagagtaaaacaggacggcgttaacttaattatatcctttggtcaagcttgtgcaaacggaaaagggctgagggaactgttcgatgcagaaatagtagaggagtgcaatatgaatgttcttgaagaaatagcaaaattggcaattgaatgtctgacattggacattgaagaacgccctaaaattaatgatgtggctcaacgccttcggacccttcaaactcatagggaggggcaggaaagtgcagctcggaaatcttcttcctcacgaatgctgaacgcattaaggaaagggtacaagcaaagcacaagcattttcagctctactcctacggccaaccataggcggaatgccatttcggaaataaaatctgagatggctaaacaacacaattttagaagtttcacaaaggagaatctatttgaagtcatggggcgttacaaatctcctcttggtgacaaagggtctggcattggtaggtacaataaaggaacactagaggacaatatgttggtggtagtgaaaagtcacctttcagatgaggatgtcttcatgattttttatgaagcatccattgtgtcccagatcgttcacgagggcatcataaaacttttggggtattgctttgatgctgattttcccatgctagtatatgagtatgttgatcgagggagtctatacgacattctgaatagtgcacaagatatcccactagggttacgcctgaagatcacggtaaagactgcagaagcattagatcaccttcactcgtcaccattctgtgtgagacacggtgatgtcaggtcgaccaacatactcttagacaaaaacctaatgccaaaaatctcaggttttacatcatcaagaaggcttaccaagggcaatttgtcttttgataacgttgaaaagtactgtgatcttatgccaaaaaaaataataagggatgatccgagctacatcgacccaaaatttctacagtctgatgtcctgacaactgaaagcgatgtctacggttttggtattattttgctagaactcattagcaggaagaaacttttataccaggacaagaaacactgcccggttcgcctcatccctgaattcatcaaagcttataaaacagaaggtagtgggaatgcaatgtttgataaaggaattacagccaaaaaagatatcgtggttcttgaaaacatcgggaggttggcactgaggtgccttagcatggaaataaggccgacaatgaaggatgtggctgaacaacttgggatgatccgaagggcttggaaacagcatgcaccacaggggcatggatgcacaggctgttggcatctatga
More
|
||||||||||
| Protein seq | MRKVHDNNNVRIFTEDEIKRITKNYRTLIGKGGFGEVFSGDLDDDDGQVAVKRYIRGDLREEFMEEVRIHAQMSHKNIVKLIGYCIGENTLMMVTEFILNGSLEDVLCNREISIPLNTRLGIAVGCAEALSYMHLSSDSLVYHGDIKPGNILLDANLTAKVSDFGISKSLSGGLTRYTLHIMGCEDYVDPLYVRDGRLTPKSDVYSFGIVLLELIARKRVKQDGVNLIISFGQACANGKGLRELFDAEIVEECNMNVLEEIAKLAIECLTLDIEERPKINDVAQRLRTLQTHREGQESAARKSSSSRMLNALRKGYKQSTSIFSSTPTANHRRNAISEIKSEMAKQHNFRSFTKENLFEVMGRYKSPLGDKGSGIGRYNKGTLEDNMLVVVKSHLSDEDVFMIFYEASIVSQIVHEGIIKLLGYCFDADFPMLVYEYVDRGSLYDILNSAQDIPLGLRLKITVKTAEALDHLHSSPFCVRHGDVRSTNILLDKNLMPKISGFTSSRRLTKGNLSFDNVEKYCDLMPKKIIRDDPSYIDPKFLQSDVLTTESDVYGFGIILLELISRKKLLYQDKKHCPVRLIPEFIKAYKTEGSGNAMFDKGITAKKDIVVLENIGRLALRCLSMEIRPTMKDVAEQLGMIRRAWKQHAPQGHGCTGCWHL |
||||||||||
| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0017260 | OsCMeo_11g0017260.01 | Chr11 | 20347108 | 20349093 | - | NAM | ||
| CDS seq | atgaggaaagtccacgataataataatgttcggatattcacagaagatgaaataaaaagaattacaaaaaactatagaactctcattggaaaaggtggatttggagaagtctttagcggtgaccttgatgatgatgatggtcaagttgcggtaaagagatatatccgtggggatttaagagaagagttcatggaagaggttagaatccatgcccaaatgagccataagaatatagtgaaacttataggctattgtattggagaaaacactctaatgatggtaactgagtttatcttgaatggtagccttgaagatgtactttgcaacagggaaatttccatccctttgaatacacgcttgggcattgctgtagggtgtgcagaagcattgagctacatgcatttatcaagtgacagccttgtatatcatggtgatattaagcctggaaacattcttctagatgccaatcttactgccaaagtttccgattttggcatctcaaaatctctttctggaggcctcactcgatatactttacatattatggggtgtgaagattacgtggaccctttatatgtcagagatggccgtcttaccccaaagagtgatgtttatagctttgggatagttcttttggaactcatagctcgaaaaagagtaaaacaggacggcgttaacttaattatatcctttggtcaagcttgtgcaaacggaaaagggctgagggaactgttcgatgcagaaatagtagaggagtgcaatatgaatgttcttgaagaaatagcaaaattggcaattgaatgtctgacattggacattgaagaacgccctaaaattaatgatgtggctcaacgccttcggacccttcaaactcatagggaggggcaggaaagtgcagctcggaaatcttcttcctcacgaatgctgaacgcattaaggaaagggtacaagcaaagcacaagcattttcagctctactcctacggccaaccataggcggaatgccatttcggaaataaaatctgagatggctaaacaacacaattttagaagtttcacaaaggagaatctatttgaagtcatggggcgttacaaatctcctcttggtgacaaagggtctggcattggtaggtacaataaaggaacactagaggacaatatgttggtggtagtgaaaagtcacctttcagatgaggatgtcttcatgattttttatgaagcatccattgtgtcccagatcgttcacgagggcatcataaaacttttggggtattgctttgatgctgattttcccatgctagtatatgagtatgttgatcgagggagtctatacgacattctgaatagtgcacaagatatcccactagggttacgcctgaagatcacggtaaagactgcagaagcattagatcaccttcactcgtcaccattctgtgtgagacacggtgatgtcaggtcgaccaacatactcttagacaaaaacctaatgccaaaaatctcaggttttacatcatcaagaaggcttaccaagggcaatttgtcttttgataacgttgaaaagtactgtgatcttatgccaaaaaaaataataagggatgatccgagctacatcgacccaaaatttctacagtctgatgtcctgacaactgaaagcgatgtctacggttttggtattattttgctagaactcattagcaggaagaaacttttataccaggacaagaaacactgcccggttcgcctcatccctgaattcatcaaagcttataaaacagaaggtagtgggaatgcaatgtttgataaaggaattacagccaaaaaagatatcgtggttcttgaaaacatcgggaggttggcactgaggtgccttagcatggaaataaggccgacaatgaaggatgtggctgaacaacttgggatgatccgaagggcttggaaacagcatgcaccacaggggcatggatgcacaggctgttggcatctatga
More
|
|||||||
| Protein seq | MRKVHDNNNVRIFTEDEIKRITKNYRTLIGKGGFGEVFSGDLDDDDGQVAVKRYIRGDLREEFMEEVRIHAQMSHKNIVKLIGYCIGENTLMMVTEFILNGSLEDVLCNREISIPLNTRLGIAVGCAEALSYMHLSSDSLVYHGDIKPGNILLDANLTAKVSDFGISKSLSGGLTRYTLHIMGCEDYVDPLYVRDGRLTPKSDVYSFGIVLLELIARKRVKQDGVNLIISFGQACANGKGLRELFDAEIVEECNMNVLEEIAKLAIECLTLDIEERPKINDVAQRLRTLQTHREGQESAARKSSSSRMLNALRKGYKQSTSIFSSTPTANHRRNAISEIKSEMAKQHNFRSFTKENLFEVMGRYKSPLGDKGSGIGRYNKGTLEDNMLVVVKSHLSDEDVFMIFYEASIVSQIVHEGIIKLLGYCFDADFPMLVYEYVDRGSLYDILNSAQDIPLGLRLKITVKTAEALDHLHSSPFCVRHGDVRSTNILLDKNLMPKISGFTSSRRLTKGNLSFDNVEKYCDLMPKKIIRDDPSYIDPKFLQSDVLTTESDVYGFGIILLELISRKKLLYQDKKHCPVRLIPEFIKAYKTEGSGNAMFDKGITAKKDIVVLENIGRLALRCLSMEIRPTMKDVAEQLGMIRRAWKQHAPQGHGCTGCWHL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0555600 | SBH | 0.780068 | 0.145547 | 1.248361 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g35290 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0555600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017320 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017380 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017190 | RBH | 0.486686 | 6.316095 | 3.488560 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0016880 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017160 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0323900 | RBH | 0 | 0 | 0.0222185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0017640 | SBH | 0.052019 | 0.0 | 0.375510 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0333600 | RBH | 0 | 0 | 0.029691 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017500 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017530 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0017050 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0016920 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017080 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017030 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017370 | RBH | 0.0 | 0.0 | 0.0 |
