Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_11g0014490 OGI:11051730 | 16/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr11:17121756-17125597
Gene Symbol -
DNA seq

tcaagggtctacaatcaattcctccagctggctttggagtgatgagtggggtatgtgaagttgaggaaaaccagttatgtttagtatcttgagggagctgaggctggtaagagcaccacagtagtgtaaattaggacatctcaattcaagctttcgaactgatggtaggccgaggggttcaagagcgaatgacttgatggtatcagaccaaattgttaagtcttccagtgtcatgtacgaattcaccaacttgcatagtatatcttcattgaatatataatacagtcccaaggaagtgagcaaggggaagtgaccaagtgcaaacaagcttggacaatgggacaggtctaatgaacggagtgatggtagagctggcagttccttcagtttctcacaactcgagatgcttagttccttcatggtagctgaggcaggaaaagtaacaagatttttgcaaccatataatctgagattacgcaagcatgacaatggaacaaatggaagagacttcaattcaattccagaataacagggtctccaagtgtggaaactcaccatcctccactccagaccactctgacaatcgagtcataccatcaaagctcaagtcttgtaatgcttggaaccctttgaatctttgctgaaggctgcaaaactcatggccaatgtgttccacaaactccattcggcttatatcaagggatttgagagaaggtaactcaccaagtgttggaaggtgttgagattgacaagcctgtaacttcagttcagttaacttggaaaaagaagcactgcccaaccagctggggtagtttccatggttcaagttttgtattcttagtaccttgaggctttggtagtgtggtcgtagtttctcaagtaactggcctcgcgattgagtgacagctgcttcattagcgtcaccatgctctgtatgttcacaacttctcaattcatcgaaatctttatcaagaaataattcgtcaaaatctaactctagtacctcaaggttccttttactttgtaaatgagcttcatctgcatgcatgatactaggtacattacgcagtccacgaatacacaacttccttattttgttcatattcctcaactctcttatgtcaacgaagcaaccacatttcatgagatgtatttcaggcaaagtttgcaagttaatcagtcgtccaattttaagtaacgtatacgcttgtatgtccagggtttgcaaattaaatagctcagacatagaattaggacgtgataaatgtgtagcacattcataacctgatagagtgagatgccgtagtagtttcatgccacctatgaagtcaagtagtgccttttgaacactgccctgtacgacgtaaatgatccgaagcttcttacagtgcgtaaacaacacttccggatttacgatatcaatatcacccattatcactatgatggctctgagagattgcgaggcatttgatatttgaattctcttcctacatagtgatcttggcattatcgacatgtatcgagcgccccgtggaacttcagtttgtttatcttcctcaagtctaaagaactcttcccctgcaagaaagcatgcaagatcatggacaagatcatgcatgaccttctttctgtccatggatagaactttgaagcaatgatcgctgaaccaattcattgaaatataactttccaatttcatcgccttgaagtaaaccaagtagtttccataaccaaactaccatgttttcatcaagataataatattttggatatagagaaagggcaacgaagcactgtttcaggtctatcggcatgtgcttgtagctcaactccaacactggcaaaacctcgttctgagtctgctccaagtcccataactcactttgtaggacatccctccatttaatttcattggtttcaaatcgcaatatgctccctacagtcttgattaccaatggtaaccccttgcatttttcagataccattcgagcaatctctacaaggtttgctggactgatattttcttgctcagtaaatgctgtttgcttgaacaatgaccaactctcgtcaggacttaagcagttcatattgtacatttgtgttgtttgcaccaaccttgccactgtctcattccgagtggttactataatgtcacaacatttagaagcaaacatcggtgtgatcaacaactcccagtaatcgcttcgctcattccatacatcatcaaagacaaggaaaaccctcttgtcctttatctcgttggccaatgctccctgtagatcaccagattgtatatgatcacagttactctgggttagagaactgatgatcttgcgtgttaggttgtgaacatcaaaacactctgaaacataagcccatgcgcaaagatcgaaagattggcgtacccttggatcattgtagacaagctgtgctagtgttgttttgcccaatcctcccataccaacaatggccaaaacagacatgcaacctccaacacggctgccttccccagagagcaattttgcgataacattctccatgtctttctttcttccaagaattctgggtgcaaatacaaaagagctagtctgccgcatagcattgatatcagggacaatccttctgtccccatcattatcagacaaactaaaactatcgcagtagtctttgatctcacagaatctctgaataactgtccttgttctgtcagccaactcacttggaactggaactattccagactcagtggagaactgctcttcatgtaccttttttttgaaaaagaattgaaagagggaggttcagtcatctatggtgcagacagggttttgggatccgattgcaaatataaatcgtgctccaccgaattggacgaatttcagaaatttcggacaaaacatcaaatttgacaattttaaccaaattcagacgaaatgggagtgaaattgtgtctcggacctcaccaaaatggacgaaattcggaccttttggcccgaatcccagaaccctgggtgcagccgtgaagacagttcactattcttttcatgtctctacctatagacacatttgtttaggattcaagctaacttcattgggaatcgatatactaccaataccaagctagaaaactccatttgatggttttgattcagctaggacaaagtactgaaccagctaattcagtaatatactaatatagtgcttgtcttgtagctttctaatgggaaaaaaaaatggaagaggggttacagttttctgtttgcttttatcccctcttcagggggtttgttcagggttcagacacttgggacctgaatgggacttgcaaagtatagctaaaactagtaatcagtataaaatactatgactaatcacagcacagacaacgtgctactaccccactaatgatagtctaatagatttcgtcagcagatgcagcgaccggactagttgattaattaattaattaatttacctcctcgcgcttgcgcttgctggcgccgccgccgccatgaacggcggcgagccgctcgagcgcctccaccttgcgccggttcacctcgtactcgtactcctccaccacgtcctcggcgtcgtaggcgagctccttgagctcctccaaccgcagcttggcggactcctcgcggatgttccagcgctgctccgcgtcgcgcagcgtggcgtggatccgccgcatggtccgctccagcatccggagctcctccagcgcgtccaggccccggctcgaccccgccgccgccgccgccggcagcagggaggagaggttgtcgatggcccatttcacggccgacgatgcgaacagtccggccatttcttgggtt

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CDS seq

atggccggactgttcgcatcgtcggccgtgaaatgggccatcgacaacctctcctccctgctgccggcggcggcggcggcggggtcgagccggggcctggacgcgctggaggagctccggatgctggagcggaccatgcggcggatccacgccacgctgcgcgacgcggagcagcgctggaacatccgcgaggagtccgccaagctgcggttggaggagctcaaggagctcgcctacgacgccgaggacgtggtggaggagtacgagtacgaggtgaaccggcgcaaggtggaggcgctcgagcggctcgccgccgttcatggcggcggcggcgccagcaagcgcaagcgcgaggaggtacatgaagagcagttctccactgagtctggaatagttccagttccaagtgagttggctgacagaacaaggacagttattcagagattctgtgagatcaaagactactgcgatagttttagtttgtctgataatgatggggacagaaggattgtccctgatatcaatgctatgcggcagactagctcttttgtatttgcacccagaattcttggaagaaagaaagacatggagaatgttatcgcaaaattgctctctggggaaggcagccgtgttggaggttgcatgtctgttttggccattgttggtatgggaggattgggcaaaacaacactagcacagcttgtctacaatgatccaaggggagcattggccaacgagataaaggacaagagggttttccttgtctttgatgatactgtagggagcatattgcgatttgaaaccaatgaaattaaatggagggatgtcctacaaagtgagttatgggacttggagcagactcagaacgaggttttgccagtgttggagttgagctacaagcacatgccgatagacctgaaacagtgcttcgttgccctttctctatatccaaaatattattatcttgatgaaaacatggtagtttggttatggaaactacttggtttacttcaaggcgatgaaattggaaagttatatttcaatgaattggttcagcgatcattgcttcaaagttctatccatggacagaaagaaggggaagagttctttagacttgaggaagataaacaaactgaagttccacggggcgctcgatacatgtcgataatgccaagatcactatgtaggaagagaattcaaatatcaaatgcctcgcaatctctcagagccatcatagtgataatgggtgatattgatatcgtaaatccggaagtgttgtttacgcactgtaagaagcttcggatcatttacgtcgtacagggcagtgttcaaaaggcactacttgacttcataggtggcatgaaactactacggcatctcactctatcaggttatgaatgtgctacacatttatcacgtcctaattctatgtctgagctatttaatttgcaaaccctggacatacaagcgtatacgttacttaaaattggacgactgattaacttgcaaactttgcctgaaatacatctcatgaaatgtggttgcttcgttgacataagagagttgaggaatatgaacaaaataaggaagttgtgtattcgtggactgcgtaatgtacctagtatcatgcatgcagatgaagctcatttacaaagtaaaaggaaccttgaggtactagagttagattttgacgaattatttcttgataaagatttcgatgaattgagaagttgtgaacatacagagcatggtgacgctaatgaagcagctgtcactcaatcgcgaggccagttacttgagaaactacgaccacactaccaaagcctcaaggtactaagaatacaaaacttgaaccatggaaactaccccagctggttgggcagtgcttctttttccaagttaactgaactgaagttacaggcttgtcaatctcaacaccttccaacacttggtgagttaccttctctcaaatcccttgatataagccgaatggagtttgtggaacacattggccatgagttttgcagccttcagcaaagattcaaagggttccaagcattacaagacttgagctttgatggtatgactcgattgtcagagtggtctggagtggaggatgctaccatgaaggaactaagcatctcgagttgtgagaaactgaaggaactgccagctctaccatcactccgttcattagacctgtcccattgtccaagcttgtttgcacttggtcacttccccttgctcacttccttgggactgtattatatattcaatgaagatatactatgcaagttggtgaattcgtacatgacactggaagacttaacaatttggtctgataccatcaagtcattcgctcttgaacccctcggcctaccatcagttcgaaagcttgaattgagatgtcctaatttacactactgtggtgctcttaccagcctcagctccctcaagatactaaacataactggttttcctcaacttcacataccccactcatcactccaaagccagctggaggaattgattgtagacccttga

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Protein seq

MAGLFASSAVKWAIDNLSSLLPAAAAAGSSRGLDALEELRMLERTMRRIHATLRDAEQRWNIREESAKLRLEELKELAYDAEDVVEEYEYEVNRRKVEALERLAAVHGGGGASKRKREEVHEEQFSTESGIVPVPSELADRTRTVIQRFCEIKDYCDSFSLSDNDGDRRIVPDINAMRQTSSFVFAPRILGRKKDMENVIAKLLSGEGSRVGGCMSVLAIVGMGGLGKTTLAQLVYNDPRGALANEIKDKRVFLVFDDTVGSILRFETNEIKWRDVLQSELWDLEQTQNEVLPVLELSYKHMPIDLKQCFVALSLYPKYYYLDENMVVWLWKLLGLLQGDEIGKLYFNELVQRSLLQSSIHGQKEGEEFFRLEEDKQTEVPRGARYMSIMPRSLCRKRIQISNASQSLRAIIVIMGDIDIVNPEVLFTHCKKLRIIYVVQGSVQKALLDFIGGMKLLRHLTLSGYECATHLSRPNSMSELFNLQTLDIQAYTLLKIGRLINLQTLPEIHLMKCGCFVDIRELRNMNKIRKLCIRGLRNVPSIMHADEAHLQSKRNLEVLELDFDELFLDKDFDELRSCEHTEHGDANEAAVTQSRGQLLEKLRPHYQSLKVLRIQNLNHGNYPSWLGSASFSKLTELKLQACQSQHLPTLGELPSLKSLDISRMEFVEHIGHEFCSLQQRFKGFQALQDLSFDGMTRLSEWSGVEDATMKELSISSCEKLKELPALPSLRSLDLSHCPSLFALGHFPLLTSLGLYYIFNEDILCKLVNSYMTLEDLTIWSDTIKSFALEPLGLPSVRKLELRCPNLHYCGALTSLSSLKILNITGFPQLHIPHSSLQSQLEELIVDP

Function Putative disease resistance RPP13-like protein 1 [UniProtKB/Swiss-Prot:Q9LRR4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_11g0014490 OsCMeo_11g0014490.01 Chr11 17121756 17125587 - NAM
CDS seq

atggccggactgttcgcatcgtcggccgtgaaatgggccatcgacaacctctcctccctgctgccggcggcggcggcggcggggtcgagccggggcctggacgcgctggaggagctccggatgctggagcggaccatgcggcggatccacgccacgctgcgcgacgcggagcagcgctggaacatccgcgaggagtccgccaagctgcggttggaggagctcaaggagctcgcctacgacgccgaggacgtggtggaggagtacgagtacgaggtgaaccggcgcaaggtggaggcgctcgagcggctcgccgccgttcatggcggcggcggcgccagcaagcgcaagcgcgaggaggtacatgaagagcagttctccactgagtctggaatagttccagttccaagtgagttggctgacagaacaaggacagttattcagagattctgtgagatcaaagactactgcgatagttttagtttgtctgataatgatggggacagaaggattgtccctgatatcaatgctatgcggcagactagctcttttgtatttgcacccagaattcttggaagaaagaaagacatggagaatgttatcgcaaaattgctctctggggaaggcagccgtgttggaggttgcatgtctgttttggccattgttggtatgggaggattgggcaaaacaacactagcacagcttgtctacaatgatccaaggggagcattggccaacgagataaaggacaagagggttttccttgtctttgatgatactgtagggagcatattgcgatttgaaaccaatgaaattaaatggagggatgtcctacaaagtgagttatgggacttggagcagactcagaacgaggttttgccagtgttggagttgagctacaagcacatgccgatagacctgaaacagtgcttcgttgccctttctctatatccaaaatattattatcttgatgaaaacatggtagtttggttatggaaactacttggtttacttcaaggcgatgaaattggaaagttatatttcaatgaattggttcagcgatcattgcttcaaagttctatccatggacagaaagaaggggaagagttctttagacttgaggaagataaacaaactgaagttccacggggcgctcgatacatgtcgataatgccaagatcactatgtaggaagagaattcaaatatcaaatgcctcgcaatctctcagagccatcatagtgataatgggtgatattgatatcgtaaatccggaagtgttgtttacgcactgtaagaagcttcggatcatttacgtcgtacagggcagtgttcaaaaggcactacttgacttcataggtggcatgaaactactacggcatctcactctatcaggttatgaatgtgctacacatttatcacgtcctaattctatgtctgagctatttaatttgcaaaccctggacatacaagcgtatacgttacttaaaattggacgactgattaacttgcaaactttgcctgaaatacatctcatgaaatgtggttgcttcgttgacataagagagttgaggaatatgaacaaaataaggaagttgtgtattcgtggactgcgtaatgtacctagtatcatgcatgcagatgaagctcatttacaaagtaaaaggaaccttgaggtactagagttagattttgacgaattatttcttgataaagatttcgatgaattgagaagttgtgaacatacagagcatggtgacgctaatgaagcagctgtcactcaatcgcgaggccagttacttgagaaactacgaccacactaccaaagcctcaaggtactaagaatacaaaacttgaaccatggaaactaccccagctggttgggcagtgcttctttttccaagttaactgaactgaagttacaggcttgtcaatctcaacaccttccaacacttggtgagttaccttctctcaaatcccttgatataagccgaatggagtttgtggaacacattggccatgagttttgcagccttcagcaaagattcaaagggttccaagcattacaagacttgagctttgatggtatgactcgattgtcagagtggtctggagtggaggatgctaccatgaaggaactaagcatctcgagttgtgagaaactgaaggaactgccagctctaccatcactccgttcattagacctgtcccattgtccaagcttgtttgcacttggtcacttccccttgctcacttccttgggactgtattatatattcaatgaagatatactatgcaagttggtgaattcgtacatgacactggaagacttaacaatttggtctgataccatcaagtcattcgctcttgaacccctcggcctaccatcagttcgaaagcttgaattgagatgtcctaatttacactactgtggtgctcttaccagcctcagctccctcaagatactaaacataactggttttcctcaacttcacataccccactcatcactccaaagccagctggaggaattgattgtagacccttga

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Protein seq

MAGLFASSAVKWAIDNLSSLLPAAAAAGSSRGLDALEELRMLERTMRRIHATLRDAEQRWNIREESAKLRLEELKELAYDAEDVVEEYEYEVNRRKVEALERLAAVHGGGGASKRKREEVHEEQFSTESGIVPVPSELADRTRTVIQRFCEIKDYCDSFSLSDNDGDRRIVPDINAMRQTSSFVFAPRILGRKKDMENVIAKLLSGEGSRVGGCMSVLAIVGMGGLGKTTLAQLVYNDPRGALANEIKDKRVFLVFDDTVGSILRFETNEIKWRDVLQSELWDLEQTQNEVLPVLELSYKHMPIDLKQCFVALSLYPKYYYLDENMVVWLWKLLGLLQGDEIGKLYFNELVQRSLLQSSIHGQKEGEEFFRLEEDKQTEVPRGARYMSIMPRSLCRKRIQISNASQSLRAIIVIMGDIDIVNPEVLFTHCKKLRIIYVVQGSVQKALLDFIGGMKLLRHLTLSGYECATHLSRPNSMSELFNLQTLDIQAYTLLKIGRLINLQTLPEIHLMKCGCFVDIRELRNMNKIRKLCIRGLRNVPSIMHADEAHLQSKRNLEVLELDFDELFLDKDFDELRSCEHTEHGDANEAAVTQSRGQLLEKLRPHYQSLKVLRIQNLNHGNYPSWLGSASFSKLTELKLQACQSQHLPTLGELPSLKSLDISRMEFVEHIGHEFCSLQQRFKGFQALQDLSFDGMTRLSEWSGVEDATMKELSISSCEKLKELPALPSLRSLDLSHCPSLFALGHFPLLTSLGLYYIFNEDILCKLVNSYMTLEDLTIWSDTIKSFALEPLGLPSVRKLELRCPNLHYCGALTSLSSLKILNITGFPQLHIPHSSLQSQLEELIVDP

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_11g0014490 OsCMeo_11g0014490.02 Chr11 17121999 17125597 - IsoSeq
CDS seq

acccaagaaatggccggactgttcgcatcgtcggccgtgaaatgggccatcgacaacctctcctccctgctgccggcggcggcggcggcggggtcgagccggggcctggacgcgctggaggagctccggatgctggagcggaccatgcggcggatccacgccacgctgcgcgacgcggagcagcgctggaacatccgcgaggagtccgccaagctgcggttggaggagctcaaggagctcgcctacgacgccgaggacgtggtggaggagtacgagtacgaggtgaaccggcgcaaggtggaggcgctcgagcggctcgccgccgttcatggcggcggcggcgccagcaagcgcaagcgcgaggaggtacatgaagagcagttctccactgagtctggaatagttccagttccaagtgagttggctgacagaacaaggacagttattcagagattctgtgagatcaaagactactgcgatagttttagtttgtctgataatgatggggacagaaggattgtccctgatatcaatgctatgcggcagactagctcttttgtatttgcacccagaattcttggaagaaagaaagacatggagaatgttatcgcaaaattgctctctggggaaggcagccgtgttggaggttgcatgtctgttttggccattgttggtatgggaggattgggcaaaacaacactagcacagcttgtctacaatgatccaagggtacgccaatctttcgatctttgcgcatgggcttatgtttcagagtgttttgatgttcacaacctaacacgcaagatcatcagttctctaacccagagtaactgtgatcatatacaatctggtgatctacagggagcattggccaacgagataaaggacaagagggttttccttgtctttgatgatgtatggaatgagcgaagcgattactgggagttgttgatcacaccgatgtttgcttctaaatgttgtgacattatagtaaccactcggaatgagacagtggcaaggttggtgcaaacaacacaaatgtacaatatgaactgcttaagtcctgacgagagttggtcattgttcaagcaaacagcatttactgagcaagaaaatatcagtccagcaaaccttgtagagattgctcgaatggtatctgaaaaatgcaaggggttaccattggtaatcaagactgtagggagcatattgcgatttgaaaccaatgaaattaaatggagggatgtcctacaaagtgagttatgggacttggagcagactcagaacgaggttttgccagtgttggagttgagctacaagcacatgccgatagacctgaaacagtgcttcgttgccctttctctatatccaaaatattattatcttgatgaaaacatggtagtttggttatggaaactacttggtttacttcaaggcgatgaaattggaaagttatatttcaatgaattggttcagcgatcattgcttcaaagttctatccatggacagaaagaaggtcat

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Protein seq

TQEMAGLFASSAVKWAIDNLSSLLPAAAAAGSSRGLDALEELRMLERTMRRIHATLRDAEQRWNIREESAKLRLEELKELAYDAEDVVEEYEYEVNRRKVEALERLAAVHGGGGASKRKREEVHEEQFSTESGIVPVPSELADRTRTVIQRFCEIKDYCDSFSLSDNDGDRRIVPDINAMRQTSSFVFAPRILGRKKDMENVIAKLLSGEGSRVGGCMSVLAIVGMGGLGKTTLAQLVYNDPRVRQSFDLCAWAYVSECFDVHNLTRKIISSLTQSNCDHIQSGDLQGALANEIKDKRVFLVFDDVWNERSDYWELLITPMFASKCCDIIVTTRNETVARLVQTTQMYNMNCLSPDESWSLFKQTAFTEQENISPANLVEIARMVSEKCKGLPLVIKTVGSILRFETNEIKWRDVLQSELWDLEQTQNEVLPVLELSYKHMPIDLKQCFVALSLYPKYYYLDENMVVWLWKLLGLLQGDEIGKLYFNELVQRSLLQSSIHGQKEGH

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 3.506751 0.0 7.995563

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0494100 SBH 3.602273 2.888683 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g30210 RBH 0.526924 2.218331 0.100952
Nipponbare | IRGSP 1.0 | RAP-db Os11g0494100 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0014620 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0014560 RBH 0.143198 0.0 0.299996
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0014440 RBH 0.0 3.855862 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0014280 RBH 0.577491 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0014530 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0274600 RBH 0.011531 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0014850 RBH 0.659324 0.0 0.100748
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0288100 RBH 5.539981 0.314962 4.7651745
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0014810 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0014730 RBH 0.384812 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0014410 RBH 0.000000 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0014180 SBH 0.000000 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0014550 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G014350 RBH 1.621651 0.0 0.500621
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0014610 RBH 1.992854 0.0 0.249307
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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