Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_10g0013690 | OGI:10040130 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr10:17758336-17762563 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgccgcggagacacgacgccctccgcctgctgctgctggtggtggtggtcgccgcggcggatgcggcgacggaggccgacgcgctgctggcgtggaaggccggcctgcaggacggcgcggccgcgctgtccgggtggagccgcgccgcgccggtgtgcgcgtggcgcggcgtggcctgcgacgccgccgccggcggcgcccgcgtcacttcgctccggctcaggggcgccggccttggcggcggcctcgacgcgctcgacttcgcggcgctcccggcgttggccgagctcgacctcaacgggaacaacttcaccggcgccatcccggcgagcatctcgcggctccgctcgctggcctcgctcgacctcggcaacaatggcttcagcgactccatcccgccgcagctcggcgacctctccggcctcgtcgacctccgcctctacaacaacaacctcgtcggcgccatcccgcaccagctcagccgcctccccaaggttgcccacttcgacctgggagcaaactacctcaccgacgaggacttcgccaagttctcgccgatgcccaccgtcacgttcatgtcgctctacctcaactccttcaatggcagcttcccggagttcatcctcaagagcggcaacgtcacctacctcgacctgtcgcagaacactctgttcgggaagataccggacacgctgccggagaagctcccgaatctgaggtacctcaacctgtccatcaatgcgttctccggcccgattccggcgtcgcttgggaagttgacgaagctgcaggacctgcggatggccgccaacaatctcaccggcggcgtcccggagttcctcgggtcgatgccgcagttgaggattcttgaactcggcgacaaccagctcggcgggccgatcccgccggttcttggccagctccagatgctgcagcggctcgacatcaagaactcggggctctcttcaactctgccgtcgcagctgggaaatctgaagaatctcattttcttcgagctgtccttgaaccagctctccggtggcttgccgccggagttcgccgggatgcgggcaatgcggtacttcggcatttccacgaacaacctcaccggtgagatcccgccggtgttgttcacgagctggccggagctcatatccttccaagtgcagaacaactcgttgacaggcaagattccgccggagctcggcaaggcgagcaaactgaacatcctctacctattcaccaacaagtttacgggctctattccggcagagctcggcgagctggagaacctgacagagctggatttgtcggtgaactcgctcaccggaccgatccccagctcgctcggcaacctcaagcagctcacaaagttggcgctattcttcaacaatctcaccggcgtaatcccgccggagattggcaacatgacggcgttgcaaagcctcgacgtcaacaccaacagtctgcacggcgagctgccagccaccatcacggccctgaggagcctccagtacctcgccgtgttcgacaaccacatgagcggcaccatcccggcggacctcggcaagggcctggccttgcagcacgtgagcttcaccaacaacaacttctccggcgagctgccgcgccacatctgcgacggcttcgcgctggaccacctcacggcgaactacaacaacttcaccggcgcgctgccgccgtgcctgaagaactgcacggcgctggtccgtgtccggctggaggagaaccacttcaccggcgacatctcggaggccttcggcgtgcaccccaagctggtgtacctggacgtctccgggaacaagctcaccggcgagctgtcgtctgcctggggacagtgcatcaacctcacactcctgcatctcgacggcaatcgcatatccggcggcattccggcggcatttgggagcatgacaagcttgaaggatctcaatttggctggaaataatctgacaggtgggattccacctgtgttgggaaatatcagggtcttcaatctcaacctgagccataactccttttccgggccgattccggcgagcttgagcaacaattccaagcttcagaaagtcgatttctcagggaacatgcttgatgggacgataccagttgccattagcaagcttgatgctctgatattgcttgatttgagcaagaacaggttgtcaggggagataccaagtgagcttggtaatctggctcagctgcagatcctgcttgatttgagcagcaattctctatcaggcgcgatccctccaaatcttgagaagctgataactctgcagagactgaacttatcacacaatgagctcagtggttcgatcccggcagggttttctcgcatgtcaagcctcgaatcagttgatttctcttataatcgactcaccgggagtataccgtcagggaatgttttccagaatgcttcagcttctgcatatgttgggaattcggggctctgtggtgatgtgcaaggtctaactccttgtgacatcagttctaccggatcatcttctgggcatcacaagagagtagtcattgcaacagttgtgtcagtagttggagtggtgttactactagccgttgttacttgcatcatactgttatgcaggaggaggcctagagagaagaaagaggtggaatctaacaccaattattcatatgagtccacaatctgggaaaaggaaggcaagttcacattcttcgacatcgtgaacgccacggacaacttcaatgaaaccttctgcatcggcaaaggagggttcggaagtgtctaccgggctgagctctccagtgggcaggttgtggccgtcaaacgcttccatgtcgccgacacggatgacataccggatgtgaacaagaagagcttcgagaacgagatcaaggcgctgacggaggtccgccaccgcaacattgtcaagctccatggcttctgcaccagtggtgactacatgtacctggtgtatgagtacttggaaaggggcagcttggggaagacattgtatggggaggaagggaagaagaagatggattggggcatgagggtgaaggtggtgcaggggctggctcatgccctggcttacttgcatcatgactgcaatccagccatcgttcatcgtgatattactgttaataatatcctgcttgagtcagactttgagccgcgcttgtgtgattttggcacggcgaagttgcttgggggtgcatcgacgaactggacttctgtggcaggatcatatggatacatggctccaggtacttttcttaaatttgaacaTttttttccttaaaatgtcacatgtttcttatgcatacaatttttgaaatgtagcttataatatcaaatcctagttatacttcaaagtgcttcagtgagatccttatggtagcaccaaatagcatttgggatgtttcagtcataattaacgaaaaaccagatggctaaatttagttcgatactcccaggtagtaatgtagtgtatgataaactgtcaaacatttctgaccataaaagaacattttgtgcaagtaactaccaaatgaagagcagtagttatgaaatatagttgtcgaattgtctgttgtttaaaaaaggaaaaaatgagagaaagaaactcagatccgatctatttaagattgttttgcacattattgtgattcatgaaagtactgaagtcattactgtaagtagagtggtcattatttaatagattgccacatactcctgtcctgaagatttgcagaactttgaaagattgtcattgggaaaaggaactgctcaaattccgacaagtacggcaccgcaccattaacacttatcgacttcgattatttcttgcagaattcgcatacacgatgaaggtgacggagaagtgcgatgtgtatagctttggcgtggttgcgctagaggtcatgatgggaaagcacccaggtgacctcttaacatccctgccagccatctcatcatcagaagaagatgatctactgctcaaggacatactagaccagcggctggatgctccaacagggcagctcgcagaagaggtcgtgttcatcgtgagaatcgcgcttggttgcacaagggtgaaccctgaatccaggccttccatgagatctgtagcgcaggagatttctgcgcatactcaagcctacctctctgaaccattcaaactgatcacaattagcaagctaacagactaccagaagtga
More
|
||||||||||
| CDS seq | atgccgcggagacacgacgccctccgcctgctgctgctggtggtggtggtcgccgcggcggatgcggcgacggaggccgacgcgctgctggcgtggaaggccggcctgcaggacggcgcggccgcgctgtccgggtggagccgcgccgcgccggtgtgcgcgtggcgcggcgtggcctgcgacgccgccgccggcggcgcccgcgtcacttcgctccggctcaggggcgccggccttggcggcggcctcgacgcgctcgacttcgcggcgctcccggcgttggccgagctcgacctcaacgggaacaacttcaccggcgccatcccggcgagcatctcgcggctccgctcgctggcctcgctcgacctcggcaacaatggcttcagcgactccatcccgccgcagctcggcgacctctccggcctcgtcgacctccgcctctacaacaacaacctcgtcggcgccatcccgcaccagctcagccgcctccccaaggttgcccacttcgacctgggagcaaactacctcaccgacgaggacttcgccaagttctcgccgatgcccaccgtcacgttcatgtcgctctacctcaactccttcaatggcagcttcccggagttcatcctcaagagcggcaacgtcacctacctcgacctgtcgcagaacactctgttcgggaagataccggacacgctgccggagaagctcccgaatctgaggtacctcaacctgtccatcaatgcgttctccggcccgattccggcgtcgcttgggaagttgacgaagctgcaggacctgcggatggccgccaacaatctcaccggcggcgtcccggagttcctcgggtcgatgccgcagttgaggattcttgaactcggcgacaaccagctcggcgggccgatcccgccggttcttggccagctccagatgctgcagcggctcgacatcaagaactcggggctctcttcaactctgccgtcgcagctgggaaatctgaagaatctcattttcttcgagctgtccttgaaccagctctccggtggcttgccgccggagttcgccgggatgcgggcaatgcggtacttcggcatttccacgaacaacctcaccggtgagatcccgccggtgttgttcacgagctggccggagctcatatccttccaagtgcagaacaactcgttgacaggcaagattccgccggagctcggcaaggcgagcaaactgaacatcctctacctattcaccaacaagtttacgggctctattccggcagagctcggcgagctggagaacctgacagagctggatttgtcggtgaactcgctcaccggaccgatccccagctcgctcggcaacctcaagcagctcacaaagttggcgctattcttcaacaatctcaccggcgtaatcccgccggagattggcaacatgacggcgttgcaaagcctcgacgtcaacaccaacagtctgcacggcgagctgccagccaccatcacggccctgaggagcctccagtacctcgccgtgttcgacaaccacatgagcggcaccatcccggcggacctcggcaagggcctggccttgcagcacgtgagcttcaccaacaacaacttctccggcgagctgccgcgccacatctgcgacggcttcgcgctggaccacctcacggcgaactacaacaacttcaccggcgcgctgccgccgtgcctgaagaactgcacggcgctggtccgtgtccggctggaggagaaccacttcaccggcgacatctcggaggccttcggcgtgcaccccaagctggtgtacctggacgtctccgggaacaagctcaccggcgagctgtcgtctgcctggggacagtgcatcaacctcacactcctgcatctcgacggcaatcgcatatccggcggcattccggcggcatttgggagcatgacaagcttgaaggatctcaatttggctggaaataatctgacaggtgggattccacctgtgttgggaaatatcagggtcttcaatctcaacctgagccataactccttttccgggccgattccggcgagcttgagcaacaattccaagcttcagaaagtcgatttctcagggaacatgcttgatgggacgataccagttgccattagcaagcttgatgctctgatattgcttgatttgagcaagaacaggttgtcaggggagataccaagtgagcttggtaatctggctcagctgcagatcctgcttgatttgagcagcaattctctatcaggcgcgatccctccaaatcttgagaagctgataactctgcagagactgaacttatcacacaatgagctcagtggttcgatcccggcagggttttctcgcatgtcaagcctcgaatcagttgatttctcttataatcgactcaccgggagtataccgtcagggaatgttttccagaatgcttcagcttctgcatatgttgggaattcggggctctgtggtgatgtgcaaggtctaactccttgtgacatcagttctaccggatcatcttctgggcatcacaagagagtagtcattgcaacagttgtgtcagtagttggagtggtgttactactagccgttgttacttgcatcatactgttatgcaggaggaggcctagagagaagaaagaggtggaatctaacaccaattattcatatgagtccacaatctgggaaaaggaaggcaagttcacattcttcgacatcgtgaacgccacggacaacttcaatgaaaccttctgcatcggcaaaggagggttcggaagtgtctaccgggctgagctctccaggcagctcgcagaagaggtcgtgttcatcgtgagaatcgcgcttggttgcacaagggtgaaccctgaatccaggccttccatgagatctgtagcgcaggagatttctgcgcatactcaagcctacctctctgaaccattcaaactgatcacaattagcaagctaacagactaccagaagtga
More
|
||||||||||
| Protein seq | MPRRHDALRLLLLVVVVAAADAATEADALLAWKAGLQDGAAALSGWSRAAPVCAWRGVACDAAAGGARVTSLRLRGAGLGGGLDALDFAALPALAELDLNGNNFTGAIPASISRLRSLASLDLGNNGFSDSIPPQLGDLSGLVDLRLYNNNLVGAIPHQLSRLPKVAHFDLGANYLTDEDFAKFSPMPTVTFMSLYLNSFNGSFPEFILKSGNVTYLDLSQNTLFGKIPDTLPEKLPNLRYLNLSINAFSGPIPASLGKLTKLQDLRMAANNLTGGVPEFLGSMPQLRILELGDNQLGGPIPPVLGQLQMLQRLDIKNSGLSSTLPSQLGNLKNLIFFELSLNQLSGGLPPEFAGMRAMRYFGISTNNLTGEIPPVLFTSWPELISFQVQNNSLTGKIPPELGKASKLNILYLFTNKFTGSIPAELGELENLTELDLSVNSLTGPIPSSLGNLKQLTKLALFFNNLTGVIPPEIGNMTALQSLDVNTNSLHGELPATITALRSLQYLAVFDNHMSGTIPADLGKGLALQHVSFTNNNFSGELPRHICDGFALDHLTANYNNFTGALPPCLKNCTALVRVRLEENHFTGDISEAFGVHPKLVYLDVSGNKLTGELSSAWGQCINLTLLHLDGNRISGGIPAAFGSMTSLKDLNLAGNNLTGGIPPVLGNIRVFNLNLSHNSFSGPIPASLSNNSKLQKVDFSGNMLDGTIPVAISKLDALILLDLSKNRLSGEIPSELGNLAQLQILLDLSSNSLSGAIPPNLEKLITLQRLNLSHNELSGSIPAGFSRMSSLESVDFSYNRLTGSIPSGNVFQNASASAYVGNSGLCGDVQGLTPCDISSTGSSSGHHKRVVIATVVSVVGVVLLLAVVTCIILLCRRRPREKKEVESNTNYSYESTIWEKEGKFTFFDIVNATDNFNETFCIGKGGFGSVYRAELSRQLAEEVVFIVRIALGCTRVNPESRPSMRSVAQEISAHTQAYLSEPFKLITISKLTDYQK |
||||||||||
| Function | Probable leucine-rich repeat receptor-like protein kinase At1g35710 [UniProtKB/Swiss-Prot:Q9LP24] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0013690 | OsCMeo_10g0013690.01 | Chr10 | 17758336 | 17762563 | + | NAM | ||
| CDS seq | atgccgcggagacacgacgccctccgcctgctgctgctggtggtggtggtcgccgcggcggatgcggcgacggaggccgacgcgctgctggcgtggaaggccggcctgcaggacggcgcggccgcgctgtccgggtggagccgcgccgcgccggtgtgcgcgtggcgcggcgtggcctgcgacgccgccgccggcggcgcccgcgtcacttcgctccggctcaggggcgccggccttggcggcggcctcgacgcgctcgacttcgcggcgctcccggcgttggccgagctcgacctcaacgggaacaacttcaccggcgccatcccggcgagcatctcgcggctccgctcgctggcctcgctcgacctcggcaacaatggcttcagcgactccatcccgccgcagctcggcgacctctccggcctcgtcgacctccgcctctacaacaacaacctcgtcggcgccatcccgcaccagctcagccgcctccccaaggttgcccacttcgacctgggagcaaactacctcaccgacgaggacttcgccaagttctcgccgatgcccaccgtcacgttcatgtcgctctacctcaactccttcaatggcagcttcccggagttcatcctcaagagcggcaacgtcacctacctcgacctgtcgcagaacactctgttcgggaagataccggacacgctgccggagaagctcccgaatctgaggtacctcaacctgtccatcaatgcgttctccggcccgattccggcgtcgcttgggaagttgacgaagctgcaggacctgcggatggccgccaacaatctcaccggcggcgtcccggagttcctcgggtcgatgccgcagttgaggattcttgaactcggcgacaaccagctcggcgggccgatcccgccggttcttggccagctccagatgctgcagcggctcgacatcaagaactcggggctctcttcaactctgccgtcgcagctgggaaatctgaagaatctcattttcttcgagctgtccttgaaccagctctccggtggcttgccgccggagttcgccgggatgcgggcaatgcggtacttcggcatttccacgaacaacctcaccggtgagatcccgccggtgttgttcacgagctggccggagctcatatccttccaagtgcagaacaactcgttgacaggcaagattccgccggagctcggcaaggcgagcaaactgaacatcctctacctattcaccaacaagtttacgggctctattccggcagagctcggcgagctggagaacctgacagagctggatttgtcggtgaactcgctcaccggaccgatccccagctcgctcggcaacctcaagcagctcacaaagttggcgctattcttcaacaatctcaccggcgtaatcccgccggagattggcaacatgacggcgttgcaaagcctcgacgtcaacaccaacagtctgcacggcgagctgccagccaccatcacggccctgaggagcctccagtacctcgccgtgttcgacaaccacatgagcggcaccatcccggcggacctcggcaagggcctggccttgcagcacgtgagcttcaccaacaacaacttctccggcgagctgccgcgccacatctgcgacggcttcgcgctggaccacctcacggcgaactacaacaacttcaccggcgcgctgccgccgtgcctgaagaactgcacggcgctggtccgtgtccggctggaggagaaccacttcaccggcgacatctcggaggccttcggcgtgcaccccaagctggtgtacctggacgtctccgggaacaagctcaccggcgagctgtcgtctgcctggggacagtgcatcaacctcacactcctgcatctcgacggcaatcgcatatccggcggcattccggcggcatttgggagcatgacaagcttgaaggatctcaatttggctggaaataatctgacaggtgggattccacctgtgttgggaaatatcagggtcttcaatctcaacctgagccataactccttttccgggccgattccggcgagcttgagcaacaattccaagcttcagaaagtcgatttctcagggaacatgcttgatgggacgataccagttgccattagcaagcttgatgctctgatattgcttgatttgagcaagaacaggttgtcaggggagataccaagtgagcttggtaatctggctcagctgcagatcctgcttgatttgagcagcaattctctatcaggcgcgatccctccaaatcttgagaagctgataactctgcagagactgaacttatcacacaatgagctcagtggttcgatcccggcagggttttctcgcatgtcaagcctcgaatcagttgatttctcttataatcgactcaccgggagtataccgtcagggaatgttttccagaatgcttcagcttctgcatatgttgggaattcggggctctgtggtgatgtgcaaggtctaactccttgtgacatcagttctaccggatcatcttctgggcatcacaagagagtagtcattgcaacagttgtgtcagtagttggagtggtgttactactagccgttgttacttgcatcatactgttatgcaggaggaggcctagagagaagaaagaggtggaatctaacaccaattattcatatgagtccacaatctgggaaaaggaaggcaagttcacattcttcgacatcgtgaacgccacggacaacttcaatgaaaccttctgcatcggcaaaggagggttcggaagtgtctaccgggctgagctctccaggcagctcgcagaagaggtcgtgttcatcgtgagaatcgcgcttggttgcacaagggtgaaccctgaatccaggccttccatgagatctgtagcgcaggagatttctgcgcatactcaagcctacctctctgaaccattcaaactgatcacaattagcaagctaacagactaccagaagtga
More
|
|||||||
| Protein seq | MPRRHDALRLLLLVVVVAAADAATEADALLAWKAGLQDGAAALSGWSRAAPVCAWRGVACDAAAGGARVTSLRLRGAGLGGGLDALDFAALPALAELDLNGNNFTGAIPASISRLRSLASLDLGNNGFSDSIPPQLGDLSGLVDLRLYNNNLVGAIPHQLSRLPKVAHFDLGANYLTDEDFAKFSPMPTVTFMSLYLNSFNGSFPEFILKSGNVTYLDLSQNTLFGKIPDTLPEKLPNLRYLNLSINAFSGPIPASLGKLTKLQDLRMAANNLTGGVPEFLGSMPQLRILELGDNQLGGPIPPVLGQLQMLQRLDIKNSGLSSTLPSQLGNLKNLIFFELSLNQLSGGLPPEFAGMRAMRYFGISTNNLTGEIPPVLFTSWPELISFQVQNNSLTGKIPPELGKASKLNILYLFTNKFTGSIPAELGELENLTELDLSVNSLTGPIPSSLGNLKQLTKLALFFNNLTGVIPPEIGNMTALQSLDVNTNSLHGELPATITALRSLQYLAVFDNHMSGTIPADLGKGLALQHVSFTNNNFSGELPRHICDGFALDHLTANYNNFTGALPPCLKNCTALVRVRLEENHFTGDISEAFGVHPKLVYLDVSGNKLTGELSSAWGQCINLTLLHLDGNRISGGIPAAFGSMTSLKDLNLAGNNLTGGIPPVLGNIRVFNLNLSHNSFSGPIPASLSNNSKLQKVDFSGNMLDGTIPVAISKLDALILLDLSKNRLSGEIPSELGNLAQLQILLDLSSNSLSGAIPPNLEKLITLQRLNLSHNELSGSIPAGFSRMSSLESVDFSYNRLTGSIPSGNVFQNASASAYVGNSGLCGDVQGLTPCDISSTGSSSGHHKRVVIATVVSVVGVVLLLAVVTCIILLCRRRPREKKEVESNTNYSYESTIWEKEGKFTFFDIVNATDNFNETFCIGKGGFGSVYRAELSRQLAEEVVFIVRIALGCTRVNPESRPSMRSVAQEISAHTQAYLSEPFKLITISKLTDYQK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 4.232080 | 1.245011 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0468500 | RBH | 0.454887 | 0.247806 | 2.431475 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g33040 | RBH | 0.170062 | 0.165877 | 0.317543 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0468500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0013980 | RBH | 0.0 | 0.883551 | 0.213539 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0014190 | RBH | 0.0 | 0.531852 | 1.363117 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0003440 | SBH | 0.0 | 12.363008 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0014050 | RBH | 0.0 | 0.229522 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0013890 | RBH | 0.527505 | 17.328310 | 2.969724 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0288600 | SBH | 0.936499 | 2.2112275 | 2.144864 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0013920 | RBH | 0.023879 | 0.517790 | 0.473012 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0310300 | SBH | 0.5951745 | 0.3719285 | 0.127059 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0013710 | SBH | 0.014096 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0013590 | SBH | 0.042996 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0013910 | RBH | 0.0 | 8.310741 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0013620 | RBH | 0.0 | 0.0 | 0.342488 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0014160 | RBH | 0.0 | 4.299273 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G013890 | RBH | 0.0 | 2.874778 | 0.436312 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0013830 | RBH | 0.0 | 8.414880 | 2.298571 |
