Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_08g0005950 | OGI:08013790 | 4/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr08:5266397-5272682 | ||||||||
| Gene Symbol | YR14, YR18, YR26 | ||||||||||
| DNA seq | ATGCCCGATCCATTGATCATTGTCGCCTCTTCGGCGGCGACATGGGTGGTGAAGAAGCTCCTGGACCAGCTCGCCCTCCCTGCCATCAAAGCGCTGCTACGCTCCAAGGGCCTAGATGATAAGGAGGTCTGGCGCCTCGAGGACGCTCTGCAGAACGCTAAGCTCGTCCTCGGCGCCGTGCCCGTCGGAGTGAGAGCAGCTGGGATCAAGATTGAAAACGTGAACCTCGGTGAGCCCATCCTGCAGGTGCAGCAGCTGGCGGCCGAACTGGCAAAGTACCTTGACGAGCTGGAGTACTACGACATCAGGGAAAAGGTGACCTCCTGCATAGGAGTATATATAACGGATTTTCGCTTCGCTTTTGCTATATTCATTCCGCATGTCTTTTCTTCCTCCAAAACTTTCGATTTACGGACCGTCCTTATTAGATCGCATCAAGATTCATGCTTCTTGGAAGATTAGATCGCATCAAGATTCGTGCGTGTAAGGAGGATCGTACTCACAACCTAAGTAATCAAGCACGCGCCGTTAGCTATCAACGTTCGCGTAAAATTTCTGAATAGTTACACATTTTCTCGCATCCCTTGCCGCACGCAACAATCGGGCCCACGCCTAAGTCCGTTTTCCACACGTGCCGCCGCGATTAGGTTGGCAATGCCTTCGCACGCGCCATTTTTTGCATGCCGGATTGGGCCCGCGACACCCTCACGCACGTGATTTGTCCTTGCTGTATGTCTGATTGGTACTGTGTCGCCCTCACCCGCGGTTTAAAAATTGAAGATGTTTTTTTTGTCAAAACTATAATACGTTGTCCGAATCCAATTCCCATCACGCGTTAAATTCATTGCAAAGTCACAACTCGCAAGCAAACTGCGAAAGAGAGTCCGTGCGATGTGGATACTAAGCGAATGAAACTCACAGAGTCCGTGTGGATATTATGTACATCGTTGCCCAGATCATCCAATTCTATTCGTATTGCACAGCACGATTCCTGAGACATGTTAGCATGATTTCAAGTCAATCTCTACACATGCTCGTACTTACTACTAGGGATACCGTTACAATAATCCATAAGAATCAGATTTACTTTCGGAAAGAACATACCAACCAAAATAAATGATGATCCAAGTTGCTGATTTCGTCCGTCATCATTTCCTACCCAACTTGAGGTAAAGTTTGACGACAAATCGAGCTCGTGTTTAAAGGCTTCATTGTTTGTCTTATGCTTATTTTTATAAGCCAAAATTTAAATTTTAGAACTTAATTTAGAATTCGACTTTTTGGTTTTTTATCGTACTTTATTTTACAACATTTGTTTTTGAGTCGCTAAGAACATGTATATAAAATATTTGCATACAAATAGTCTTTTATTTGGTAATAAATGATTCGGATAAGCATATGAATAAACGAAACAGTGGGTTGTGATTATTTATCCACCGGCACATATCTACAAATTAAATTGGCTCTACCCGTTGCAACGCACGGGCATATTTTCGTATGTGTGTGTGTAGTAAACTTAACTAGGGCTTCATGGTGCCCGGGCACCAAGTTTCAAATTGAGTATATACCCAATTCAATTGAGTATGAATTTTTTTTAAAATGTTTAGGTATGAACATTAAGTTATTTACTAACTAGTTCAAACAAGTTTGAACGTTTGAACTGAATTTGAACATCTTTTTGTTAGATTTTGATTCTAGGTATATAGCATCCAAACATATAATTAGTTAGGTATGTAATAATGGAATGTGAAATAAAGTTGAATTTGAGTTGTTTTTGTTGCTAGGTATAGGTCTGAATCAATTTCTATGTCTAGGTATATACTCACAATTTGAAAATTTTGAAAAATTTTGAGTGGATTTGTGTATTTCATACCTTGTGTGTGTGTGTATTGATAATGCATCTGTTAGTTATTGTATTGTAGAAGTTGGTACATTTCTCTATAAACTCGCTTAAAATTAGACAAGTTTGATTTAAGACAAAACTAATATACTTATATATAATATGAAACGGAGGAGTAGTTGAGAATGACTAACATCAGATTAAAGTGCCCTTTCAAATTGATGAATGGGCAAAACTACCTTAAGAAAGTTTCAAACAAAATATTTCAAATACCCATGAAGATCTATTGTTAGATAGTTATATATTAACATTCACCACCTACCACCGTAAGTGTAAAGTACCGTAAAAGTGTCTGTTTGGACCCGGAGTGAAATTTCTATTTTTTCTGATGAAATATCAAATACTAAAGAACTCTACAATTAATATATATGTTTTTTGTATGCAATGATTGTCTCGCTTACATCTGCAACAATTGTTTGGAAGACATGGATTTAATTGTTGTGTTTCCGTTCGCGATATTCAACAGGTGACGCAAAATATTCCGAGGGACAGCTGGAACTCATTTACATACACAGTGAGATCTATTACTCATGTTGGACATTCATCGAAACCGGCAGTCACTAGCTCTGAAATATCGCGTGTAATGTCTATAGTTGACAGGCTGAATAATATTTGTGCAAATGTTTACGATGCTCTGAAGATAGATAAACTTGGTGCAATTATCCAGTCGATTAGAACCCCGAGCACAGACACACGAGAAACAACATATATCAGAACAGAAAGCAAAAAGGTTTTCGAAAGAGGAGAGAAGAAAAAAATCGTGGATCTAATTTGTAATGCTGCATCAAGTGGCAATGAACTTTCAGTTGTTCCAATAATTGGTGATGGAGGTGTTGGAAAGACAACACTGGCTCGAGAAGTGTACCGTGACCAAGAAGTAAAAGATAACTTCGACATCATGATCTGGATCTACGTATCAGCTAATTTCAACGAAGTAAAGATAACACAAGGGATTCTGGAGCAAATACCAGGATGTGAGTACAAAAGCACTAACAATCTCACCGTGCTTCACCGTGGTATCCAACAACATTTGAACAAAAGATTTCTACTAGTTCTTGATGACGTGTGGGAAGAAAGAGAGAGTAGCTGGGATAGGTTATTGGCTCCACTAAGATGTACACAGGTTAAGGGCAATGTGATTTTATTGACTACTCGGAGTCTATCTGTTGCCGATAAAACAAGCAAAGAGGAGATGTACATCAAATTGGATGGTATGAAGAAGGATGTATTTTGGAGCTTCTTCAAACAATGCATATTTGGTGATGAGAAATATGAAGACAAAGGGAGGCTTCAGGACATTGCCAAGAAAATAGCCATCAAGCTGAATGGAAATCCGTTAGCGGCTAAAACTGTCGGAACACTCCTGAGAAGACATGTTCATGAGGTTCACTGGAGAAAAATCTTGGATATCAAAGAATGGATAAAACCAGAAGGGATGGGTGATCTTGAGCCAGCGCTAATGCTCAGTTTCAATCACCTTCCCTACCACCTTCAGCTTCTCTTCTCATATTGTGCTGTGTTTCCTAAGGGATACAGATTTGACAAGGAACAGTTGATCCGGATGTGGATTACGCTTGGCTTCGTCGTAGACCAGTGGAGGAATTTGGAAGACGCGGCAAGTTACAGTTTTGATGATTTGGTAGACCGGAGCTTCTTTCAGAACGATGGGCAGCAATTCATTGTGCATGATCTATTACATGATGTAGCACAACAAGTCTCAGTTCATGAATGCCTTGCTATCGATGGCTTGAATCCTGGTCAGAAGTTCTTTCAATCCACTCGTCATGTTGGCATTTGGACTGAGTCAGTTTACAAGGAAGATAACATGGTACGTAATCAAAAATTTGAAGAAAAGTTGGATAAGATCCAGAATAGTGGCATGCTGACATTCCTGGAGAGTTTAATGCTTGTAGGCATGTATGATGAGAACTTCTCTAAAAAGTTTTCAAAGATCCTGGAGAAAACACATTATGTCAGGCTGCTTCAGCTATCAGTAATGCCCTTCAATGCTGACAGTTTGTTATCCCGTATCAGAAATTTCATCCATCTCCGCTATCTAGAACTGAGATCCACTCCTGAAATGAGCATGCCTTTGCCTACGAGTATATGCCAGCTCTACCACCTACAGCTACTAGATGTCACACACTGGAGTGGTCTATATGGTTTGCCGAAGGGCATGAGCAATCTTGTGAACCTACGGTATCTGTTTGTTCCGGGGTCAGGATCATTGCACTCGAAGATATCAAGGGTTGGAGAGCTCAAGCTTCTGCAAGAACTGAAGCAATTTCAGGTTCAAAAAGAGGATGGCTTTGACATTTCGCAGCTCGGAAGCTTAAACGAAATCAGCGGGTCACTTAGTATCCTCGGCCTTGAGAATGTCACAAAGAAGGAAGAGGCAACTCAAGCAAGGATTGGAGATAAGATGGATCTGAGGACACTTTCACTGACATGGGGGAGTGTAAGCGGAAGTTGCACCGTCCAGAGAGAAGTGATGGAGGGTCTTAAACCGCATGAAGATCTTGCCAGTCTTCTCGTCTTCAATTATGCTGGCTCTACTCCATCATGGTGGCTACGAGACGATTTCTCGCTCCGCAATCTAGAAAGCTTCCATCTCCAGGACTGCGCAGCGGTGAAGATCCTACCACCATTCGAGGAGATGCCATACCTGAAGAAACTGTCCTTGGTTGGTATGCCATCTCTGAAAAATGTCAGGATCGACTTCAACTCTGCTGACCAGATGGATCTCGATTTAAGTGAAATTGAAATATCTCAGTGTTCAGGTTTAACATCCATAAGACTACATTCCTGCAATGCTTTGACTAAGCTAAGCATCAACGATTGTGAGAAACTAGCTTCCTTAGAGGGCTTGCCGTCTTCTGAACAACTGCGGCAGTTTGTTGTCCAGGGATGCCCTCAACTTCCATCAGGTTCCTCCATCCCAACCTGATAATTTGGTGGCAAATTAGCACTAGCAAACTACCTGTAAGTATGGCTTCACTAAACTATGTCATGCTCGTTCGACTTTATGGAAGAATTACTAGATATTGCATTAATTAAAACTTCATCGTAATTCATAACGACTCAATGTTATAAACTGATCGGTGTACTGATTACCTATTAATTCTAAAAGTTCATAGGAAGTGTCTCATTAATATGGTATAGATATATTACTGTATATGAAGGTTTTGAATAAATAGAGAATAAAACAACCTTGATTTTCTTTATTTACGCTGTTTACATATGTAGTTTTGTAGTCTAAACCAAGCAAATTTTCATACTTTTAATTTTATTTTTAAGAATTCTTAGCCACCACAAAATGAGTGCTTGGCAACAGGAGTAATGAAATTATCTGATTTGTTACTTTAAAAATCTGATTCGGATTATAATCTACTTCCTCTGGTTCCATATTAATTGACGTTTTAGATAAGGTTGAGGTCAAACTTTTATAACTTTAAAAATCAATAATTTTAAAAATATTAAGTTTAAAGGAACTAGAACAACATATACAGATTTGTCTTTCAAAGCACTATAATAAAAGTAAACATATATTTATTTATCATATATATTATAATAGAAAAATAAGGTCAAAGATATATTTTTGTAGACCGTGTCATTGTCCAAAACGTCAATCAAAATTAAACCGGAGGGAGTAAGGATTAGCCAAACACATATAAGTAGTATATTAATTTGATTCTTGTAAAATTAAAAATCTGTACTATTTTTTTTTCTGAGAAATACATCGTAGCAAGTAGGTGGTGTTAATTCTGTTTTTGATTATAGCATAAACCATTTTGGTGTAACTGATGATTGATACATTTTATCGACATCTTTGTTTGATGTTTTCCACATTCCATTTACTCCTAAGTCAAATAGCACAATCTCGAGCTGATTCCATTCAAAAATTTACTCCATGAGTCCAAACTTACATCCTTACAGTTTTCCCATCCATCAAACAAGATGTTCTCCTTGTTCACTCTGTCCTGAAAAATCACTGTTTTTCTTCATAATTCCAACACACTTTTTTTCCTTTGTTATTGATAGTAAGATCTGGTTTCAGAATAAAGAAGAGGGGAACCATCTGGGACGATGTGAATTGTGAATTTGTGATACCTGGATCTGGATGTGGACAAGCTTGGATCTGCTGAAAATTATATTGGCACTTCTGTCACTGGACGCAGTTGATGCTGGATCGGTGTGGTTTTGCTGTTCTGTACGTTCACTATTATTTTAGTATACTTTGTTGTCATCTTATTCACGCTACTAATAAATATGGAGATGTTATGCCTAATGTGTAATAAATCGAAAGGCAGACCAACTAAACAGTTAAATGGTCTGATCGTGAGGGCTTGTGCCATTTTGTGTTACCTAAGTACAATTTGTGCGTTT
More
|
||||||||||
| CDS seq | ATGCCCGATCCATTGATCATTGTCGCCTCTTCGGCGGCGACATGGGTGGTGAAGAAGCTCCTGGACCAGCTCGCCCTCCCTGCCATCAAAGCGCTGCTACGCTCCAAGGGCCTAGATGATAAGGAGGTCTGGCGCCTCGAGGACGCTCTGCAGAACGCTAAGCTCGTCCTCGGCGCCGTGCCCGTCGGAGTGAGAGCAGCTGGGATCAAGATTGAAAACGTGAACCTCGGTGAGCCCATCCTGCAGGTGCAGCAGCTGGCGGCCGAACTGGCAAAGTACCTTGACGAGCTGGAGTACTACGACATCAGGGAAAAGGTGACGCAAAATATTCCGAGGGACAGCTGGAACTCATTTACATACACAGTGAGATCTATTACTCATGTTGGACATTCATCGAAACCGGCAGTCACTAGCTCTGAAATATCGCGTGTAATGTCTATAGTTGACAGGCTGAATAATATTTGTGCAAATGTTTACGATGCTCTGAAGATAGATAAACTTGGTGCAATTATCCAGTCGATTAGAACCCCGAGCACAGACACACGAGAAACAACATATATCAGAACAGAAAGCAAAAAGGTTTTCGAAAGAGGAGAGAAGAAAAAAATCGTGGATCTAATTTGTAATGCTGCATCAAGTGGCAATGAACTTTCAGTTGTTCCAATAATTGGTGATGGAGGTGTTGGAAAGACAACACTGGCTCGAGAAGTGTACCGTGACCAAGAAGTAAAAGATAACTTCGACATCATGATCTGGATCTACGTATCAGCTAATTTCAACGAAGTAAAGATAACACAAGGGATTCTGGAGCAAATACCAGGATGTGAGTACAAAAGCACTAACAATCTCACCGTGCTTCACCGTGGTATCCAACAACATTTGAACAAAAGATTTCTACTAGTTCTTGATGACGTGTGGGAAGAAAGAGAGAGTAGCTGGGATAGGTTATTGGCTCCACTAAGATGTACACAGGTTAAGGGCAATGTGATTTTATTGACTACTCGGAGTCTATCTGTTGCCGATAAAACAAGCAAAGAGGAGATGTACATCAAATTGGATGGTATGAAGAAGGATGTATTTTGGAGCTTCTTCAAACAATGCATATTTGGTGATGAGAAATATGAAGACAAAGGGAGGCTTCAGGACATTGCCAAGAAAATAGCCATCAAGCTGAATGGAAATCCGTTAGCGGCTAAAACTGTCGGAACACTCCTGAGAAGACATGTTCATGAGGTTCACTGGAGAAAAATCTTGGATATCAAAGAATGGATAAAACCAGAAGGGATGGGTGATCTTGAGCCAGCGCTAATGCTCAGTTTCAATCACCTTCCCTACCACCTTCAGCTTCTCTTCTCATATTGTGCTGTGTTTCCTAAGGGATACAGATTTGACAAGGAACAGTTGATCCGGATGTGGATTACGCTTGGCTTCGTCGTAGACCAGTGGAGGAATTTGGAAGACGCGGCAAGTTACAGTTTTGATGATTTGGTAGACCGGAGCTTCTTTCAGAACGATGGGCAGCAATTCATTGTGCATGATCTATTACATGATGTAGCACAACAAGTCTCAGTTCATGAATGCCTTGCTATCGATGGCTTGAATCCTGGTCAGAAGTTCTTTCAATCCACTCGTCATGTTGGCATTTGGACTGAGTCAGTTTACAAGGAAGATAACATGGTACGTAATCAAAAATTTGAAGAAAAGTTGGATAAGATCCAGAATAGTGGCATGCTGACATTCCTGGAGAGTTTAATGCTTGTAGGCATGTATGATGAGAACTTCTCTAAAAAGTTTTCAAAGATCCTGGAGAAAACACATTATGTCAGGCTGCTTCAGCTATCAGTAATGCCCTTCAATGCTGACAGTTTGTTATCCCGTATCAGAAATTTCATCCATCTCCGCTATCTAGAACTGAGATCCACTCCTGAAATGAGCATGCCTTTGCCTACGAGTATATGCCAGCTCTACCACCTACAGCTACTAGATGTCACACACTGGAGTGGTCTATATGGTTTGCCGAAGGGCATGAGCAATCTTGTGAACCTACGGTATCTGTTTGTTCCGGGGTCAGGATCATTGCACTCGAAGATATCAAGGGTTGGAGAGCTCAAGCTTCTGCAAGAACTGAAGCAATTTCAGGTTCAAAAAGAGGATGGCTTTGACATTTCGCAGCTCGGAAGCTTAAACGAAATCAGCGGGTCACTTAGTATCCTCGGCCTTGAGAATGTCACAAAGAAGGAAGAGGCAACTCAAGCAAGGATTGGAGATAAGATGGATCTGAGGACACTTTCACTGACATGGGGGAGTGTAAGCGGAAGTTGCACCGTCCAGAGAGAAGTGATGGAGGGTCTTAAACCGCATGAAGATCTTGCCAGTCTTCTCGTCTTCAATTATGCTGGCTCTACTCCATCATGGTGGCTACGAGACGATTTCTCGCTCCGCAATCTAGAAAGCTTCCATCTCCAGGACTGCGCAGCGGTGAAGATCCTACCACCATTCGAGGAGATGCCATACCTGAAGAAACTGTCCTTGGTTGGTATGCCATCTCTGAAAAATGTCAGGATCGACTTCAACTCTGCTGACCAGATGGATCTCGATTTAAGTGAAATTGAAATATCTCAGTGTTCAGGTTTAACATCCATAAGACTACATTCCTGCAATGCTTTGACTAAGCTAAGCATCAACGATTGTGAGAAACTAGCTTCCTTAGAGGGCTTGCCGTCTTCTGAACAACTGCGGCAGTTTGTTGTCCAGGGATGCCCTCAACTTCCATCAGGTTCCTCCATCCCAACCTGA
More
|
||||||||||
| Protein seq | MPDPLIIVASSAATWVVKKLLDQLALPAIKALLRSKGLDDKEVWRLEDALQNAKLVLGAVPVGVRAAGIKIENVNLGEPILQVQQLAAELAKYLDELEYYDIREKVTQNIPRDSWNSFTYTVRSITHVGHSSKPAVTSSEISRVMSIVDRLNNICANVYDALKIDKLGAIIQSIRTPSTDTRETTYIRTESKKVFERGEKKKIVDLICNAASSGNELSVVPIIGDGGVGKTTLAREVYRDQEVKDNFDIMIWIYVSANFNEVKITQGILEQIPGCEYKSTNNLTVLHRGIQQHLNKRFLLVLDDVWEERESSWDRLLAPLRCTQVKGNVILLTTRSLSVADKTSKEEMYIKLDGMKKDVFWSFFKQCIFGDEKYEDKGRLQDIAKKIAIKLNGNPLAAKTVGTLLRRHVHEVHWRKILDIKEWIKPEGMGDLEPALMLSFNHLPYHLQLLFSYCAVFPKGYRFDKEQLIRMWITLGFVVDQWRNLEDAASYSFDDLVDRSFFQNDGQQFIVHDLLHDVAQQVSVHECLAIDGLNPGQKFFQSTRHVGIWTESVYKEDNMVRNQKFEEKLDKIQNSGMLTFLESLMLVGMYDENFSKKFSKILEKTHYVRLLQLSVMPFNADSLLSRIRNFIHLRYLELRSTPEMSMPLPTSICQLYHLQLLDVTHWSGLYGLPKGMSNLVNLRYLFVPGSGSLHSKISRVGELKLLQELKQFQVQKEDGFDISQLGSLNEISGSLSILGLENVTKKEEATQARIGDKMDLRTLSLTWGSVSGSCTVQREVMEGLKPHEDLASLLVFNYAGSTPSWWLRDDFSLRNLESFHLQDCAAVKILPPFEEMPYLKKLSLVGMPSLKNVRIDFNSADQMDLDLSEIEISQCSGLTSIRLHSCNALTKLSINDCEKLASLEGLPSSEQLRQFVVQGCPQLPSGSSIPT |
||||||||||
| Function | Disease resistance protein RGA2 [UniProtKB/Swiss-Prot:Q7XBQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_08g0005950 | OsCMeo_08g0005950.01 | Chr08 | 5266397 | 5271243 | + | NAM | ||
| CDS seq | ATGCCCGATCCATTGATCATTGTCGCCTCTTCGGCGGCGACATGGGTGGTGAAGAAGCTCCTGGACCAGCTCGCCCTCCCTGCCATCAAAGCGCTGCTACGCTCCAAGGGCCTAGATGATAAGGAGGTCTGGCGCCTCGAGGACGCTCTGCAGAACGCTAAGCTCGTCCTCGGCGCCGTGCCCGTCGGAGTGAGAGCAGCTGGGATCAAGATTGAAAACGTGAACCTCGGTGAGCCCATCCTGCAGGTGCAGCAGCTGGCGGCCGAACTGGCAAAGTACCTTGACGAGCTGGAGTACTACGACATCAGGGAAAAGGTGACGCAAAATATTCCGAGGGACAGCTGGAACTCATTTACATACACAGTGAGATCTATTACTCATGTTGGACATTCATCGAAACCGGCAGTCACTAGCTCTGAAATATCGCGTGTAATGTCTATAGTTGACAGGCTGAATAATATTTGTGCAAATGTTTACGATGCTCTGAAGATAGATAAACTTGGTGCAATTATCCAGTCGATTAGAACCCCGAGCACAGACACACGAGAAACAACATATATCAGAACAGAAAGCAAAAAGGTTTTCGAAAGAGGAGAGAAGAAAAAAATCGTGGATCTAATTTGTAATGCTGCATCAAGTGGCAATGAACTTTCAGTTGTTCCAATAATTGGTGATGGAGGTGTTGGAAAGACAACACTGGCTCGAGAAGTGTACCGTGACCAAGAAGTAAAAGATAACTTCGACATCATGATCTGGATCTACGTATCAGCTAATTTCAACGAAGTAAAGATAACACAAGGGATTCTGGAGCAAATACCAGGATGTGAGTACAAAAGCACTAACAATCTCACCGTGCTTCACCGTGGTATCCAACAACATTTGAACAAAAGATTTCTACTAGTTCTTGATGACGTGTGGGAAGAAAGAGAGAGTAGCTGGGATAGGTTATTGGCTCCACTAAGATGTACACAGGTTAAGGGCAATGTGATTTTATTGACTACTCGGAGTCTATCTGTTGCCGATAAAACAAGCAAAGAGGAGATGTACATCAAATTGGATGGTATGAAGAAGGATGTATTTTGGAGCTTCTTCAAACAATGCATATTTGGTGATGAGAAATATGAAGACAAAGGGAGGCTTCAGGACATTGCCAAGAAAATAGCCATCAAGCTGAATGGAAATCCGTTAGCGGCTAAAACTGTCGGAACACTCCTGAGAAGACATGTTCATGAGGTTCACTGGAGAAAAATCTTGGATATCAAAGAATGGATAAAACCAGAAGGGATGGGTGATCTTGAGCCAGCGCTAATGCTCAGTTTCAATCACCTTCCCTACCACCTTCAGCTTCTCTTCTCATATTGTGCTGTGTTTCCTAAGGGATACAGATTTGACAAGGAACAGTTGATCCGGATGTGGATTACGCTTGGCTTCGTCGTAGACCAGTGGAGGAATTTGGAAGACGCGGCAAGTTACAGTTTTGATGATTTGGTAGACCGGAGCTTCTTTCAGAACGATGGGCAGCAATTCATTGTGCATGATCTATTACATGATGTAGCACAACAAGTCTCAGTTCATGAATGCCTTGCTATCGATGGCTTGAATCCTGGTCAGAAGTTCTTTCAATCCACTCGTCATGTTGGCATTTGGACTGAGTCAGTTTACAAGGAAGATAACATGGTACGTAATCAAAAATTTGAAGAAAAGTTGGATAAGATCCAGAATAGTGGCATGCTGACATTCCTGGAGAGTTTAATGCTTGTAGGCATGTATGATGAGAACTTCTCTAAAAAGTTTTCAAAGATCCTGGAGAAAACACATTATGTCAGGCTGCTTCAGCTATCAGTAATGCCCTTCAATGCTGACAGTTTGTTATCCCGTATCAGAAATTTCATCCATCTCCGCTATCTAGAACTGAGATCCACTCCTGAAATGAGCATGCCTTTGCCTACGAGTATATGCCAGCTCTACCACCTACAGCTACTAGATGTCACACACTGGAGTGGTCTATATGGTTTGCCGAAGGGCATGAGCAATCTTGTGAACCTACGGTATCTGTTTGTTCCGGGGTCAGGATCATTGCACTCGAAGATATCAAGGGTTGGAGAGCTCAAGCTTCTGCAAGAACTGAAGCAATTTCAGGTTCAAAAAGAGGATGGCTTTGACATTTCGCAGCTCGGAAGCTTAAACGAAATCAGCGGGTCACTTAGTATCCTCGGCCTTGAGAATGTCACAAAGAAGGAAGAGGCAACTCAAGCAAGGATTGGAGATAAGATGGATCTGAGGACACTTTCACTGACATGGGGGAGTGTAAGCGGAAGTTGCACCGTCCAGAGAGAAGTGATGGAGGGTCTTAAACCGCATGAAGATCTTGCCAGTCTTCTCGTCTTCAATTATGCTGGCTCTACTCCATCATGGTGGCTACGAGACGATTTCTCGCTCCGCAATCTAGAAAGCTTCCATCTCCAGGACTGCGCAGCGGTGAAGATCCTACCACCATTCGAGGAGATGCCATACCTGAAGAAACTGTCCTTGGTTGGTATGCCATCTCTGAAAAATGTCAGGATCGACTTCAACTCTGCTGACCAGATGGATCTCGATTTAAGTGAAATTGAAATATCTCAGTGTTCAGGTTTAACATCCATAAGACTACATTCCTGCAATGCTTTGACTAAGCTAAGCATCAACGATTGTGAGAAACTAGCTTCCTTAGAGGGCTTGCCGTCTTCTGAACAACTGCGGCAGTTTGTTGTCCAGGGATGCCCTCAACTTCCATCAGGTTCCTCCATCCCAACCTGA
More
|
|||||||
| Protein seq | MPDPLIIVASSAATWVVKKLLDQLALPAIKALLRSKGLDDKEVWRLEDALQNAKLVLGAVPVGVRAAGIKIENVNLGEPILQVQQLAAELAKYLDELEYYDIREKVTQNIPRDSWNSFTYTVRSITHVGHSSKPAVTSSEISRVMSIVDRLNNICANVYDALKIDKLGAIIQSIRTPSTDTRETTYIRTESKKVFERGEKKKIVDLICNAASSGNELSVVPIIGDGGVGKTTLAREVYRDQEVKDNFDIMIWIYVSANFNEVKITQGILEQIPGCEYKSTNNLTVLHRGIQQHLNKRFLLVLDDVWEERESSWDRLLAPLRCTQVKGNVILLTTRSLSVADKTSKEEMYIKLDGMKKDVFWSFFKQCIFGDEKYEDKGRLQDIAKKIAIKLNGNPLAAKTVGTLLRRHVHEVHWRKILDIKEWIKPEGMGDLEPALMLSFNHLPYHLQLLFSYCAVFPKGYRFDKEQLIRMWITLGFVVDQWRNLEDAASYSFDDLVDRSFFQNDGQQFIVHDLLHDVAQQVSVHECLAIDGLNPGQKFFQSTRHVGIWTESVYKEDNMVRNQKFEEKLDKIQNSGMLTFLESLMLVGMYDENFSKKFSKILEKTHYVRLLQLSVMPFNADSLLSRIRNFIHLRYLELRSTPEMSMPLPTSICQLYHLQLLDVTHWSGLYGLPKGMSNLVNLRYLFVPGSGSLHSKISRVGELKLLQELKQFQVQKEDGFDISQLGSLNEISGSLSILGLENVTKKEEATQARIGDKMDLRTLSLTWGSVSGSCTVQREVMEGLKPHEDLASLLVFNYAGSTPSWWLRDDFSLRNLESFHLQDCAAVKILPPFEEMPYLKKLSLVGMPSLKNVRIDFNSADQMDLDLSEIEISQCSGLTSIRLHSCNALTKLSINDCEKLASLEGLPSSEQLRQFVVQGCPQLPSGSSIPT
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_08g0005950 | OsCMeo_08g0005950.02 | Chr08 | 5270144 | 5272682 | + | IsoSeq | ||
| CDS seq | ATGCCAGCTCTACCACCTACAGCTACTAGATGTCACACACTGGAGTGGTCTATATGGTTTGCCGAAGGGCATGAGCAATCTTGTGAACCTACGGTATCTGTTTGTTCCGGGGTCAGGATCATTGCACTCGAAGATATCAAGGGTTGGAGAGCTCAAGCTTCTGCAAGAACTGAAGCAATTTCAGGTTCAAAAAGAGGATGG
More
|
|||||||
| Protein seq | MPALPPTATRCHTLEWSIWFAEGHEQSCEPTVSVCSGVRIIALEDIKGWRAQASARTEAISGSKRGW |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 20.471243 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0296600 | SBH | 0.412578 | 0.738357 | 3.003143 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g05800 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0296600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0010850 | SBH | 0.759804 | 3.236304 | 4.516544 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0010540 | SBH | 0.158404 | 0.000000 | 1.312838 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0005940 | RBH | 0.559543 | 9.146810 | 0.293873 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0010900 | SBH | 0.223897 | 0.127401 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0010410 | SBH | 1.712845 | 0.000000 | 6.457957 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0079500 | RBH | 0.0040245 | 0.057868 | 0.0469025 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0005520 | RBH | 0.0 | 0.395277 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0082800 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0010010 | SBH | 0.231480 | 0.075448 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0010160 | SBH | 0.138071 | 0.932130 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0010020 | SBH | 0.726852 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0010790 | SBH | 0.650256 | 0.073658 | 0.564245 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0010110 | SBH | 0.126739 | 0.427718 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G010260 | SBH | 0.362653 | 1.093177 | 1.174230 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0010240 | SBH | 0.534104 | 1.219700 | 4.288191 |
