Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_08g0010010 | OGI:08033660 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr08:11378316-11386551 | ||||||||
| Gene Symbol | YR14, YR18, YR26 | ||||||||||
| DNA seq | ggttagaatatatagcacaaatcttcattgcggccttacaattataatcacaaaataacaatgtatttatctgggtaacatagaagggcagatgtgtccccatggtatttaagaccatttaatgttttagccggtgtgcctaccgaaatattacacatcaggcacaacatttccatatatggtagtgtgaataaaatgacaataaagtatacgaaaataatagtgaatacaacagcaaaaaccacaacgatacagcatgaactagtaagcgtccaagctgcctccactgacagaagttaaaacatgcctttttcagcagaaacaaggtcgtccacatcccggttccctcctcttctttggtctgaaatcatatcttaatatgaataacaaatgaaatagtgtcttgaaataatgatttttttaggacagagcgaacttggaggaagttgtatttgatggacgaaaaaactgtatgatataagtttggagtaaatggaacgtggaaaacattaaacagagcaGgggatgaaatgtactatcttgtatcaatcatcagttacatcaaatggtttatagtatacctataaagaaaagctcatagtataaccaaatacagaacaaagatacacctacttgccaaaatcagcacataaattcaaatttacgttaatcaaattattcatcggattattgctgtggattatttacttgattgtagggacaaattcaatattttgaaaaatcaacttaacacaaatggttagagcaagtggtctagtcaaaggagtagaagattttttttttttgataaaatgtatttttaaatgcgtgaagcaaataatctgtgtcagtaatatgatgaagtagctaaaaaggtattgagccaacactacttagatatgtgcttggctaatccttggattacaatctgaatcagattttaaaagtgacgaataagactatttgattacttctgttggcaagcactctttttgtgatactaagaattcttaaaagcaacttaaaatttcaaagtaacttcgtattatagtgcaaatttgagacaagtggggacaaactgcttgttttagactgcacaaaacaacaaatgtaaacaacataaatgaaggaaatcaaggttgttttattcactacagtttattaatacagtaacatattattttagtttgtggtttcttcaaaaaagcatattattttagttgagtacctatttcacacaaatgctaagatgtttcttactgatttgctgcaacaacatatggttttgaaattaaatataactgaagaacaattctcttcatggagaatgacttgaaagaggccagatacttaaaaatgatactatgtgcctatgagaagttatccggcttaaagatcaatttccataagagcgaaatgttttgttatggcaaggctgaaagggaagacatatatgaaagcttgtttggatgcaaaatgggatcttatccatttagatatttgggcctcccaatgcattacagaagattggccaattaagattggaaggaactagaggatagaatccaaaagAaactcagtagttggaaagggaagttgctatcgaccggaggaagattaattcttattaactccgtgttgagtagtttagcaatgtatatgctttcattctttgagatccctaaaggtatcctttaaaaactggactattataggtccagattcttttggcaatgtgacgagcataagaagaaatacagattagccaaatggagtgtgctttgcagacctaaggaatgcgggggcctagggattcaaaacttagaaatccaaaataggtgtatgttaagtacatggttatttaaactaatcaatgaggatggactgtggcaaaatatgcttaggaggaagtatctggcaaaaaaaaaaaaccattatgcaagtacaaaaacatccaggagattcttatttttgggctagtcttatgacagctaaagaatcctttcaatcacttggttattttaaaacgtgtgatggcaaacaagtacgattttgggaggattgttggataggaagtcaacctcttgagaaagaataccctaatctgtataatttggtcaggaataagaatgcagtagtggcagaggttttgggaagaactccgttgaaggtggcctttagaagagcaataactggaagaaatttgcaagattggtataatttagtttccaaagtagtgaatgtcactatgtctgatcaaaaggatcaatttatttggaaagcaaacaaggatgggctctttatggttaactccatgtacaaggtgcttatgtataatggagtgatacctagaaagactttgatttggaagctcagaattccactgaaattaaaatattcttgtggtatcttaaagaaggggttattctaacaaaggataacctagctaagagaagatggagaggtagtctaagttgctgcttttgtaactctaaagagttgatgcaccatcttttctttgactgtctcatggcaaggtacatttggagtgcatgtttctttactttcggaattagccaaccccgtagcatggctcatatgtttggaaattggttgaatggttttgaacctagacttaaaagacaaatttatatgggcattgcggcaattttgtgggctttgtggcttagtaggaatgatgtagtctttaatggctccaatcctatttctttcatgcaggtaatcttcaggggggctcattgggcaagactttggtccttgcttcttaaagaggacgatggagatgccgtccaagttcattgtagaattttggagtcacgggtaatggagttttatgctacttatggctggaattttagaagatgaattgaagcttagctttcttgattcttattttgggttttatctttatgtgatgttgcccatgtatcgggatgagtcttatgtaaacttcgtaccttgtgttgtctcctatataacgggatgagtcttatgtactcttggaaacttgtttggctgtgtacaccctcacaggtgtagaggccgggtttaatataaatccattatctaaaaaaaataactgaagaacaattgcaaggatgaaagaagcttcttactgagtgagctatattttaaacaaacgttgaatatgttttaaacaaactcccctaagggcacttgagacaagtctgaaggagatatacttttagtcattagtattaacagctaagcagtacgccaatcagtttacaacattgagttgttatgaattagatgaagtctttattaatgcaatatccagcaattcttcaatgaagtggaatgagcatgacatagtttagtgaagccatacttacagctagtttgatagagtttgccaccaaatcatcagtttgcgatgaaacctgacggaagttttgggcatccttggacaacacactgcttcagtttttcagaaaatgacaagccctctaaggaacctagtgcctcacaatcattgatgcttaacatagtcaacgccttgcaggaatgtagtcttatggatgttaaagctaaacatttggatatttcaatttcgcttaactcaagttcatcctcctcatcggcagagttgaagtcaatcctgatacttttcagacagggcatacaaaccaaggacagcttcttcaggaatggcatctcctcaaatggtggtaggatcttcactgctgcacaatcctggagatggaggttttctaaattgccaagtgagaaactatctcctaataaccatgatggagtagcaccagaataattgtagacaagaagatgggaaaggttttcatgtggtttaagaccctccatcacttctttctggacggtagtagtacttccgcttgcactcccccatgttagtgaaagtgtcctcaggtgttttttgtctttaagccttgcacgagttgcatctcccttcgttttgacagtctcaaggccgaggatactaagtgatcctctgatttcatttatgttcccgagttgtgaaatctcaaagccatcggcttcttgaacctgaaattctttcagttcttgtagaaacttaagttccccaactctggatatcttggagtgcaatgatcctgaccccggaacaaacagatggcgtaggttcacaagattactcatatcctttggcaaatcatttagaccactccaatgttgaacatctagtacttgtaggtggtagagcttacatatagcctcaggcaaagatttgggcttatctgacgtacacctcagttctaagtagcgaagatggattaacttctttatactggatagtagaatgtcagaattgaatggcattgctgttaactggagcatccggacataacgtactcgctcaagagtcttcacaaacttagcagagtagttctcatcatatacacctgcaagaattaaactctccaggcttcccaagacattatcctgaactgcatctaacttctcttcaaagtcatcattccgttctatgctttgctcattgtacaccggctcagtccagatgctaaggtgacaaatggatgacggaactgttcgaagatctgacccatcaataataaggcatttgttaatggagacttcttgtgcaacatcatgcattaaatcatgcacagtataatactgtgacactccatatttctgaaaaaagcttcggtctaccaaatcatcaaaacagtcacttccttcatcctccaatttctttctctcattcatgacaaatcccagagcaatccatgtacgtatcaactgtcctttgtcaaaattgtaaccctttggaaacatagcacagtaactgaagagtagctgaagacgatagggaagctgattgtaactgagctttagtgcaggtataatgtcatcaatactttcttgtaacttccattcattgctatctagaattcttgtccagtaatcctcattaatatttcttctcaaaagtgtaccaacactttttgctgccaatggattgccattcagtctggtggctattttcttagcaatattctgtagcttcctttggccttgatagttttcatcaccaaatatgcatcttttgaagaataaccagaagtcatcttttttcataccatccaagtcaatgtgtgcttctgtgttgctagttatcctagccaccgataacttccgagtagttaccaagagtacgttacccttagcctgtgcggatctaagtggggccaataacttgtcccaacgaccctcactctcttcccacatgtcatccagaacaagcagaaatcgtttggtcaaatatttgttgataccacgctgaagcacagtgagattcttggcgcttttgaactcacattcaggtatttgttccagaatcccttgtgtaagcttaacttcatcaaagttagcagatacgtagatccagagcatgatgtcaaatttatcttttacttctgggtcatggtacaccaatcgagcaagtgttgtcttcccaacaccaccagcaccaactattggaacaactaaaagttcttgatcactcgatgcagcactattaattagttctataatatctttcatttcttcccttgggaacaccttatttctaggattttcagtgaagttctccacagtctcacgtttgtctgtacttgcatcttgagcagcttgtttaattgcatcaagtttatctagcaagagagccttgtgaacatcatcacaaatgctatgcaaatatcccacagtatctctaatctgttttatgtctgttctattgtacttcggctttgattgcccagcttgagtaaggggtaaattcattttggataatggattgctgctcttctggttcttctttacctacacaacataaatggaaaatggtagctaggatgtcaaaggatatagatgaaatcactataccatataatggaatgggggtcacaatgggtgaaattcagatcaagattttacagactacagaagcattaatacagtcgaaatcgaaaatagaactgtgctagcacttatgagaggatggttgattaagcgtgcaaggatcgactgtaggacgcttaaactggaacagtaaggggctttttcccatgctgaagtcaaccgattgggagatccataagcctacaatagaccaccttactaaccggatctaaaatgcacatagaacagcttattatttagctgtggcatgataatcctaaaacaactgccacatatgaccatgctcactgacaaagtgccatccaggagttctagcacgcagatacacaaatcgttagtagcatcacctagcgattacactcccattgctgactgccatcatgaggcaaccctttggtcaggtgactacctacaacctctttattttcggttattttctggtttcttttttggtaaaggtttgagtgcccatgtcctgtctttttattcttatacgtacatctgtacataaaatttatctgaaataacattttttataattaaacgtatgaatctcaataaactaaattgccaaggctatatatattagtttggttaaaagttgcatccgaagtcttgcaatatatgtcaattcgatatacttgaaattcccatttcattatgtttatatattgaacaaatcaagagttagtatttgctacatttacaatttttaccactaacttaacatgttaaagtttttatatttatttatttattttcttgcacaagcatatcatcctcttggttcacagtccaactagatttcaccttctgctacaaaattagatctcaagcgaacactatgaagtctaagatttcttttttattaacaatacagtttataaaaaaatttctcttacaaacaagtgacttaattctgatttttgtcaagtttgaatatttggccacctgagtatagtgtgatttaaatttcaacatttggttaatataatcgcacgttgtagtcatagaagtgccttgttatttttacatattttttgtggaaccatatgtgctggatggcatgatcattttcttgtttatattgaattggactccacatctcacttatttttttatgcatagttttgtttcattctgtttggacatggtctggactctaccataggagttgtatgggacttaagtactgattgcgagtccatatgcaggaatatctactatatgggaattgcagtccttatttcctccgacaattaaggggcgtagccctcaggagagcctccgattactatgtaaacaaagttttgcaatatgaagcataagcatattttgagacactttgacaaattgatggctcatggcccacatgtagagatgtcaacaaagcttcactggaaagctaatcactcggttttgccctaggatcaggtgatagttaattaagactcatagtactcctttcacaatcaacccccaccaacccagatgttaacacatcttctaatttatctagctacttagcttttactctctttttttttacaacaggtaattactattacccggcttttgggagaaagccaaaagacagaacagatcttttactctttattgccccaatttttttttgttttagccaaagcttaaactcacccaagctttactgctgcaactattcgtacctaaaactgctagtctgtgacacgaacatttagtctggcaaagatttttttttaaaaaaaattgcgaggacaaccttagagatttagctaaacgctccaaaaaaaaaaaacatttagtctgcaaaatgAaaaaaaaaaaagagatgaaatttcgagtgctgaaagaagaaactgaatcgcccaaattgcaacagtagtgacagtgtagatacctttttcttgacgtcgtagtactcgagctcgtcgaggtgcctggccaaatcggtggctagccgctgaaccaggtcgatctgcggaagtagctggtcgttcccaatcctgacccctgcggcggcaccggcgggcacggcgccgaggacgagcgtggctcgccgcagcgcatccctgagggagctggcctccgcgtccaggccctccgagcccagcagcttcttgatggcatagtcgctcagccggtccaggagcttgttgatcagccatgtcgccgccgcagaagcaagagcgatatccatcgccgacgattcaccaaggagaagaaggggagaaggggcagccgggct
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| CDS seq | atggatatcgctcttgcttctgcggcggcgacatggctgatcaacaagctcctggaccggctgagcgactatgccatcaagaagctgctgggctcggagggcctggacgcggaggccagctccctcagggatgcgctgcggcgagccacgctcgtcctcggcgccgtgcccgccggtgccgccgcaggggtcaggattgggaacgaccagctacttccgcagatcgacctggttcagcggctagccaccgatttggccaggcacctcgacgagctcgagtactacgacgtcaagaaaaaggtaaagaagaaccagaagagcagcaatccattatccaaaatgaatttaccccttactcaagctgggcaatcaaagccgaagtacaatagaacagacataaaacagattagagatactgtgggatatttgcatagcatttgtgatgatgttcacaaggctctcttgctagataaacttgatgcaattaaacaagctgctcaagatgcaagtacagacaaacgtgagactgtggagaacttcactgaaaatcctagaaataaggtgttcccaagggaagaaatgaaagatattatagaactaattaatagtgctgcatcgagtgatcaagaacttttagttgttccaatagttggtgctggtggtgttgggaagacaacacttgctcgattggtgtaccatgacccagaagtaaaagataaatttgacatcatgctctggatctacgtatctgctaactttgatgaagttaagcttacacaagggattctggaacaaatacctgaatgtgagttcaaaagcgccaagaatctcactgtgcttcagcgtggtatcaacaaatatttgaccaaacgatttctgcttgttctggatgacatgtgggaagagagtgagggtcgttgggacaagttattggccccacttagatccgcacaggctaagggtaacgtactcttggtaactactcggaagttatcggtggctaggataactagcaacacagaagcacacattgacttggatggtatgaaaaaagatgacttctggttattcttcaaaagatgcatatttggtgatgaaaactatcaaggccaaaggaagctacagaatattgctaagaaaatagccaccagactgaatggcaatccattggcagcaaaaagtgttggtacacttttgagaagaaatattaatgaggattactggacaagaattctagatagcaatgaatggaagttacaagaaagtattgatgacattatacctgcactaaagctcagttacaatcagcttccctatcgtcttcagctactcttcagttactgtgctatgtttccaaagggttacaattttgacaaaggacagttgatacgtacatggattgctctgggatttgtcatgaatgagagaaagaaattggaggatgaaggaagtgactgttttgatgatttggtagaccgaagcttttttcagaaatatggagtgtcacagtattatactgtgcatgatttaatgcatgatgttgcacaagaagtctccattaacaaatgccttattattgatgggtcagatcttcgaacagttccgtcatccatttgtcaccttagcatctggactgagccggtgtacaatgagcaaagcatagaacggaatgatgactttgaagagaagttagatgcagttcaggataatgtcttgggaagcctggagagtttaattcttgcaggtgtatatgatgagaactactctgctaagtttgtgaagactcttgagcgagtacgttatgtccggatgctccagttaacagcaatgccattcaattctgacattctactatccagtataaagaagttaatccatcttcgctacttagaactgaggtgtacgtcagataagcccaaatctttgcctgaggctatatgtaagctctaccacctacaagtactagatgttcaacattggagtggtctaaatgatttgccaaaggatatgagtaatcttgtgaacctacgccatctgtttgttccggggtcaggatcattgcactccaagatatccagagttggggaacttaagtttctacaagaactgaaagaatttcaggttcaagaagccgatggctttgagatttcacaactcgggaacataaatgaaatcagaggatcacttagtatcctcggccttgagactgtcaaaacgaagggagatgcaactcgtgcaaggcttaaagacaaaaaacacctgaggacactttcactaacatgggggagtgcaagcggaagtactactaccgtccagaaagaagtgatggagggtcttaaaccacatgaaaacctttcccatcttcttgtctacaattattctggtgctactccatcatggttattaggagatagtttctcacttggcaatttagaaaacctccatctccaggattgtgcagcagtgaagatcctaccaccatttgaggagatgccattcctgaagaagctgtccttggtttgtatgccctgtctgaaaagtatcaggattgacttcaactctgccgatgaggaggatgaacttgagttaagcgaaattgaaatatccaaatgtttagctttaacatccataagactacattcctgcaaggcgttgactatgttaagcatcaatgattgtgaggcactaggttccttagagggcttgtcattttctgaaaaactgaagcagtgtgttgtccaaggatgcccaaaacttccgtcaggtttcatcgcaaactga
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| Protein seq | MDIALASAAATWLINKLLDRLSDYAIKKLLGSEGLDAEASSLRDALRRATLVLGAVPAGAAAGVRIGNDQLLPQIDLVQRLATDLARHLDELEYYDVKKKVKKNQKSSNPLSKMNLPLTQAGQSKPKYNRTDIKQIRDTVGYLHSICDDVHKALLLDKLDAIKQAAQDASTDKRETVENFTENPRNKVFPREEMKDIIELINSAASSDQELLVVPIVGAGGVGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPLAAKSVGTLLRRNINEDYWTRILDSNEWKLQESIDDIIPALKLSYNQLPYRLQLLFSYCAMFPKGYNFDKGQLIRTWIALGFVMNERKKLEDEGSDCFDDLVDRSFFQKYGVSQYYTVHDLMHDVAQEVSINKCLIIDGSDLRTVPSSICHLSIWTEPVYNEQSIERNDDFEEKLDAVQDNVLGSLESLILAGVYDENYSAKFVKTLERVRYVRMLQLTAMPFNSDILLSSIKKLIHLRYLELRCTSDKPKSLPEAICKLYHLQVLDVQHWSGLNDLPKDMSNLVNLRHLFVPGSGSLHSKISRVGELKFLQELKEFQVQEADGFEISQLGNINEIRGSLSILGLETVKTKGDATRARLKDKKHLRTLSLTWGSASGSTTTVQKEVMEGLKPHENLSHLLVYNYSGATPSWLLGDSFSLGNLENLHLQDCAAVKILPPFEEMPFLKKLSLVCMPCLKSIRIDFNSADEEDELELSEIEISKCLALTSIRLHSCKALTMLSINDCEALGSLEGLSFSEKLKQCVVQGCPKLPSGFIAN |
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| Function | Disease resistance protein RGA2 [UniProtKB/Swiss-Prot:Q7XBQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_08g0010010 | OsLima_08g0010010.01 | Chr08 | 11378316 | 11386551 | - | NAM | ||
| CDS seq | atggatatcgctcttgcttctgcggcggcgacatggctgatcaacaagctcctggaccggctgagcgactatgccatcaagaagctgctgggctcggagggcctggacgcggaggccagctccctcagggatgcgctgcggcgagccacgctcgtcctcggcgccgtgcccgccggtgccgccgcaggggtcaggattgggaacgaccagctacttccgcagatcgacctggttcagcggctagccaccgatttggccaggcacctcgacgagctcgagtactacgacgtcaagaaaaaggtaaagaagaaccagaagagcagcaatccattatccaaaatgaatttaccccttactcaagctgggcaatcaaagccgaagtacaatagaacagacataaaacagattagagatactgtgggatatttgcatagcatttgtgatgatgttcacaaggctctcttgctagataaacttgatgcaattaaacaagctgctcaagatgcaagtacagacaaacgtgagactgtggagaacttcactgaaaatcctagaaataaggtgttcccaagggaagaaatgaaagatattatagaactaattaatagtgctgcatcgagtgatcaagaacttttagttgttccaatagttggtgctggtggtgttgggaagacaacacttgctcgattggtgtaccatgacccagaagtaaaagataaatttgacatcatgctctggatctacgtatctgctaactttgatgaagttaagcttacacaagggattctggaacaaatacctgaatgtgagttcaaaagcgccaagaatctcactgtgcttcagcgtggtatcaacaaatatttgaccaaacgatttctgcttgttctggatgacatgtgggaagagagtgagggtcgttgggacaagttattggccccacttagatccgcacaggctaagggtaacgtactcttggtaactactcggaagttatcggtggctaggataactagcaacacagaagcacacattgacttggatggtatgaaaaaagatgacttctggttattcttcaaaagatgcatatttggtgatgaaaactatcaaggccaaaggaagctacagaatattgctaagaaaatagccaccagactgaatggcaatccattggcagcaaaaagtgttggtacacttttgagaagaaatattaatgaggattactggacaagaattctagatagcaatgaatggaagttacaagaaagtattgatgacattatacctgcactaaagctcagttacaatcagcttccctatcgtcttcagctactcttcagttactgtgctatgtttccaaagggttacaattttgacaaaggacagttgatacgtacatggattgctctgggatttgtcatgaatgagagaaagaaattggaggatgaaggaagtgactgttttgatgatttggtagaccgaagcttttttcagaaatatggagtgtcacagtattatactgtgcatgatttaatgcatgatgttgcacaagaagtctccattaacaaatgccttattattgatgggtcagatcttcgaacagttccgtcatccatttgtcaccttagcatctggactgagccggtgtacaatgagcaaagcatagaacggaatgatgactttgaagagaagttagatgcagttcaggataatgtcttgggaagcctggagagtttaattcttgcaggtgtatatgatgagaactactctgctaagtttgtgaagactcttgagcgagtacgttatgtccggatgctccagttaacagcaatgccattcaattctgacattctactatccagtataaagaagttaatccatcttcgctacttagaactgaggtgtacgtcagataagcccaaatctttgcctgaggctatatgtaagctctaccacctacaagtactagatgttcaacattggagtggtctaaatgatttgccaaaggatatgagtaatcttgtgaacctacgccatctgtttgttccggggtcaggatcattgcactccaagatatccagagttggggaacttaagtttctacaagaactgaaagaatttcaggttcaagaagccgatggctttgagatttcacaactcgggaacataaatgaaatcagaggatcacttagtatcctcggccttgagactgtcaaaacgaagggagatgcaactcgtgcaaggcttaaagacaaaaaacacctgaggacactttcactaacatgggggagtgcaagcggaagtactactaccgtccagaaagaagtgatggagggtcttaaaccacatgaaaacctttcccatcttcttgtctacaattattctggtgctactccatcatggttattaggagatagtttctcacttggcaatttagaaaacctccatctccaggattgtgcagcagtgaagatcctaccaccatttgaggagatgccattcctgaagaagctgtccttggtttgtatgccctgtctgaaaagtatcaggattgacttcaactctgccgatgaggaggatgaacttgagttaagcgaaattgaaatatccaaatgtttagctttaacatccataagactacattcctgcaaggcgttgactatgttaagcatcaatgattgtgaggcactaggttccttagagggcttgtcattttctgaaaaactgaagcagtgtgttgtccaaggatgcccaaaacttccgtcaggtttcatcgcaaactga
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| Protein seq | MDIALASAAATWLINKLLDRLSDYAIKKLLGSEGLDAEASSLRDALRRATLVLGAVPAGAAAGVRIGNDQLLPQIDLVQRLATDLARHLDELEYYDVKKKVKKNQKSSNPLSKMNLPLTQAGQSKPKYNRTDIKQIRDTVGYLHSICDDVHKALLLDKLDAIKQAAQDASTDKRETVENFTENPRNKVFPREEMKDIIELINSAASSDQELLVVPIVGAGGVGKTTLARLVYHDPEVKDKFDIMLWIYVSANFDEVKLTQGILEQIPECEFKSAKNLTVLQRGINKYLTKRFLLVLDDMWEESEGRWDKLLAPLRSAQAKGNVLLVTTRKLSVARITSNTEAHIDLDGMKKDDFWLFFKRCIFGDENYQGQRKLQNIAKKIATRLNGNPLAAKSVGTLLRRNINEDYWTRILDSNEWKLQESIDDIIPALKLSYNQLPYRLQLLFSYCAMFPKGYNFDKGQLIRTWIALGFVMNERKKLEDEGSDCFDDLVDRSFFQKYGVSQYYTVHDLMHDVAQEVSINKCLIIDGSDLRTVPSSICHLSIWTEPVYNEQSIERNDDFEEKLDAVQDNVLGSLESLILAGVYDENYSAKFVKTLERVRYVRMLQLTAMPFNSDILLSSIKKLIHLRYLELRCTSDKPKSLPEAICKLYHLQVLDVQHWSGLNDLPKDMSNLVNLRHLFVPGSGSLHSKISRVGELKFLQELKEFQVQEADGFEISQLGNINEIRGSLSILGLETVKTKGDATRARLKDKKHLRTLSLTWGSASGSTTTVQKEVMEGLKPHENLSHLLVYNYSGATPSWLLGDSFSLGNLENLHLQDCAAVKILPPFEEMPFLKKLSLVCMPCLKSIRIDFNSADEEDELELSEIEISKCLALTSIRLHSCKALTMLSINDCEALGSLEGLSFSEKLKQCVVQGCPKLPSGFIAN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.231480 | 0.075448 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0296600 | RBH | 0.412578 | 0.738357 | 3.003143 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g19980 | RBH | 0.278102 | 0.494996 | 0.770561 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0296600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0010850 | RBH | 0.759804 | 3.236304 | 4.516544 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0010540 | RBH | 0.158404 | 0.000000 | 1.312838 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0011030 | RBH | 1.040939 | 4.815150 | 7.699723 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0010900 | RBH | 0.223897 | 0.127401 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0010410 | RBH | 1.712845 | 0.000000 | 6.457957 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0183400 | RBH | 3.285674 | 0.7761605 | 6.10547 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0010440 | RBH | 0.149169 | 0.196486 | 0.653256 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0186000 | RBH | 4.3977575 | 0.34112 | 19.1917085 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0010160 | RBH | 0.138071 | 0.932130 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0010020 | RBH | 0.726852 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0010790 | RBH | 0.650256 | 0.073658 | 0.564245 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0010110 | RBH | 0.126739 | 0.427718 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G010260 | RBH | 0.362653 | 1.093177 | 1.174230 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0010240 | RBH | 0.534104 | 1.219700 | 4.288191 |
