Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_07g0027910 | OGI:07079200 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr07:28610369-28612861 | ||||||||
| Gene Symbol | WOX11, OsWOX11, Os WOX11, OsWOX12A | ||||||||||
| DNA seq | atggacggcggccacagcccggacaggcatgcggcggcggcggcgggggagccggtgaggtcgcggtggacgccgaagccggagcagatactcatcctggagtccatcttcaacagcggcatggtgaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagcgcttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcccgccgccgccagcgccagctgcaggcgcaggcgcaggcggccgcggccgccgcctcgtcgggatctcctccgactgcttcgtccggtggcctcgcgcctggccacgccggctcgccggcttcgtcgctcgggatgttcgcgcacggcgccgccgggtacagctcctcgtcgtcctcatcgtggccgtcctcgccgccgtcggtggggatgatgatgggggacgtggactacgggggcggcggcgacgacctgttcgccatctcgaggcagatggggtacatggacggcggcggcggctcgtcgtcgtcggcggccgccggtcagcatcagcagcagcagctctactactcgtgtcaacctggtgagcccttcatacatgatgcatgtccccccaatttccattcgtcggtgctttgattaatttgcctttaatttctctctaactaaacatgcacatatatagctagtttttagcatatatatacatgtttaattacgcatgcagatgcagtgatgaggggtattagttgttccgtttggtgctaataattcttgctctcctagtacaaattcagagagagaaaattcctttcagtctctctttgcttcgatcgatctcttctagagtattaagggacatgtacatacgatcatattactgcatatatacacttgatcgatcgtttcatcttccagaaactcatattttgtcttccttaattttaatttgtccttattttgatcttccgcgttgaatgtctttgagactttgcacttgtatttttgcggtaattgagattgggaacgatcaattacgcagtactagctagtgtactacactgaaataagagaattaagggcaaagctttgtcttgttcttttatcttagtagtagcaaatatgcttcatgcatgcatactaaataaactaatactgccaatttatccatgcacgcatatataatcgtactacattatatgcatatggagtatatataatgcaattaatactagctagtagttgaattgttgcatgcgtgaatggcgcaatacaatatatgtacttaattatgcagatgcatgcatgtttttgtcatggatttgtagatatgcatgagtatacatataatttagacatagggctgatactagctaggacactgaatttctaaccaccggccagccgatcaatggtagtactacttattattagttaatcatcaagtaaagccacctattgatcgatcgatcatatatatgtacactgtatatatcactccagttgtagtaggagtagtacttttgcaataattgagaagtagtccttgtccgaagtgacattagatatgtaggtaatgtgaattgggaaagaaaaatgatggatgaatatgatatgtgcagcgacgatgacggtgttcatcaacggagtggcgacggaggtgccaaggggaccgatcgatctgagatcaatgtttgggcaggacgtgatgctggtgcattcaacgggtgctcttcttccagccaacgagtacggcatcctcctccattctctccagatgggcgagagctacttcctggtcagtctcagccctgatcgatcgctagctactaattcgattctgtcatcacaatgcacgtcactaagctaactagctatataccctgtcaattaattacttacttacagaacaattaattaatcgatctatagtcaattaattaacaaggcgttgcatcatctatgtatatatgacaggtcacgaggtcgtcttgatcgagttgagcgattcgtcgattgattgatcgatggcaacgtacgtattgtgtcagcaagatttaggtaccccttgtccgttggatcagatcgatatgcaagcaacgcatgctttgcaggtgccggccggttaattacgcgatcgatcgagctagcagatgatgaatgctgcacgtacgcatggcaattgtcactgcgacgagcctgcatatatatgaacgatccattgatcgtcattctagcgaccaagcagcacgatagtacaagtatatactatacaatgcaattgcagcgacgaactagttaattataatacagataatgcatgtgtacttctgtggccatacatatatatatagagagagagaggggattaattactatattcgtttttcatctagctggtcgatctctgtgtacttgtatgtatcccgttctcgatctttatatcagaatattttatatatgtatattttacaattatat
More
|
||||||||||
| CDS seq | atggacggcggccacagcccggacaggcatgcggcggcggcggcgggggagccggtgaggtcgcggtggacgccgaagccggagcagatactcatcctggagtccatcttcaacagcggcatggtgaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagcgcttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcccgccgccgccagcgccagctgcaggcgcaggcgcaggcggccgcggccgccgcctcgtcgggatctcctccgactgcttcgtccggtggcctcgcgcctggccacgccggctcgccggcttcgtcgctcgggatgttcgcgcacggcgccgccgggtacagctcctcgtcgtcctcatcgtggccgtcctcgccgccgtcggtggggatgatgatgggggacgtggactacgggggcggcggcgacgacctgttcgccatctcgaggcagatggggtacatggacggcggcggcggctcgtcgtcgtcggcggccgccggtcagcatcagcagcagcagctctactactcgtgtcaacctgcgacgatgacggtgttcatcaacggagtggcgacggaggtgccaaggggaccgatcgatctgagatcaatgtttgggcaggacgtgatgctggtgcattcaacgggtgctcttcttccagccaacgagtacggcatcctcctccattctctccagatgggcgagagctacttcctggtcacgaggtcgtcttga
More
|
||||||||||
| Protein seq | MDGGHSPDRHAAAAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAPGHAGSPASSLGMFAHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMDGGGGSSSSAAAGQHQQQQLYYSCQPATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGILLHSLQMGESYFLVTRSS |
||||||||||
| Function | WUSCHEL-related homeobox 11 [UniProtKB/Swiss-Prot:Q0D3I7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0027910 | OsCMeo_07g0027910.01 | Chr07 | 28610369 | 28612861 | + | NAM | ||
| CDS seq | atggacggcggccacagcccggacaggcatgcggcggcggcggcgggggagccggtgaggtcgcggtggacgccgaagccggagcagatactcatcctggagtccatcttcaacagcggcatggtgaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagcgcttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcccgccgccgccagcgccagctgcaggcgcaggcgcaggcggccgcggccgccgcctcgtcgggatctcctccgactgcttcgtccggtggcctcgcgcctggccacgccggctcgccggcttcgtcgctcgggatgttcgcgcacggcgccgccgggtacagctcctcgtcgtcctcatcgtggccgtcctcgccgccgtcggtggggatgatgatgggggacgtggactacgggggcggcggcgacgacctgttcgccatctcgaggcagatggggtacatggacggcggcggcggctcgtcgtcgtcggcggccgccggtcagcatcagcagcagcagctctactactcgtgtcaacctgcgacgatgacggtgttcatcaacggagtggcgacggaggtgccaaggggaccgatcgatctgagatcaatgtttgggcaggacgtgatgctggtgcattcaacgggtgctcttcttccagccaacgagtacggcatcctcctccattctctccagatgggcgagagctacttcctggtcacgaggtcgtcttga
More
|
|||||||
| Protein seq | MDGGHSPDRHAAAAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAPGHAGSPASSLGMFAHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMDGGGGSSSSAAAGQHQQQQLYYSCQPATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGILLHSLQMGESYFLVTRSS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 1.502930 | 0.254555 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0684900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48560 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0684900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0028070 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0028120 | RBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016030 | RBH | 0.0 | 1.158161 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027700 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0028010 | RBH | 0.0 | 2.694478 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0472800 | RBH | 0.142162 | 0.4955175 | 1.8502675 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028440 | RBH | 0.000000 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0486700 | RBH | 0.550267 | 1.6508605 | 1.180697 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027730 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0028180 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027900 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0028230 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027790 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027860 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027610 | RBH | 0.0 | 0.0 | 0.0 |
