Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_07g0027700 | OGI:07079200 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr07:28731847-28734792 | ||||||||
| Gene Symbol | WOX11, OsWOX11, Os WOX11, OsWOX12A | ||||||||||
| DNA seq | atgacaggcaccattttcagttccatccaaaaagtaaagagtgacaagctagaacatgttaataatatataaatttatacagcaatgcatgcatgtttaaccaacacaagttgatcggagagcctcggaggcaaatataatactaagagcggcggtaaagattctctagcagcactagtgtcgtccttgcatgtgtgccattcgttcattcatattctcatcactagtgaaatttacttagattccatctcactcatcacaactatcaaagcttagctaagctactagctgcttcttctcctataagtagggcgatctcactctctcgcagcaagccaattaagcgaattaagcacacatcaattgaccaaacctatctctctatctctctcgagctagcgagctctaggtgttcgacaccgaacaaggcagctagctagtggcgatggacggcggccacagcccggacaggcatgcggcggcggcggcgggggagccggtgaggtcgcggtggacgccgaagccggagcagatactcatcctggagtccatcttcaacagcggcatggtgaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagcgcttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcccgccgccgccagcgccagctgcaggcgcaggcgcaggcggccgcggccgccgcctcgtcgggatctcctccgactgcttcgtccggtggcctcgcgcctggccacgccggctcgccggcttcgtcgctcgggatgttcgcgcacggcgccgccgggtacagctcctcgtcgtcctcatcgtggccgtcctcgccgccgtcggtggggatgatgatgggggacgtggactacgggggcggcggcgacgacctgttcgccatctcgaggcagatggggtacatggacggcggcggcggctcgtcgtcgtcggcggccgccggtcagcatcagcagcagcagctctactactcgtgtcaacctggtgagcccttcatacatgatgcatgtccccccaatttccattcgtcggtgctttgattaatttgcctttaatttctctctaactaaacatgcacatatatagctagtttttagcatatatatacatgtttaattacgcatgcagatgcagtgatgaggggaattagttgttccgtttggtgctaataattcttgctctcctagtacaaattcagagaaagaaaattcctttcagtctctctttgcttcgatcgatctcttctagagtattaagggacatgtacatacgatcatattactgcatatatacacttgatcgatcgtttcatcttccagaaactcatattttgtcttCcttaattttaatttgtccttattttgatcttccgcgttgaatgtctttgagactttgcacttgtatttttgcggtaattgagattgggaacgatcaattacgcagtactagctagtgtactacactgaaataagagaattaagggcaaagctttgtcttgttcttttatcttagtagtagcaaatatgcttcatgcatgcatactaaataaactaatactgccaatttatccatgcatgcatatataatcgtactacattatatgcatatggagtatatataatgcaattaatactagtagttgaattgttgcatgcgtgaatggcgcaatacaatatatgtacttaattatgcagatgcatgcatgtttttgtcatggatttgtagatatgcatgagtatacatataatttagacatagggctgatactagctaggacactgaatttctaaccaccggccagccgatcaatggtagtactacttattattggttaatcatcaagtaaagccacctattgatcgatcgatcatatatatgtacactgtatatatcactccagttgtagtaggagtagtacttttgcaataattgagaagtagtccttgtccgaagtgacattagatatgtaggtaatgtgaattgggaaagaaaaatgatggatgaatatgatatgtgcagcgacgatgacggtgttcatcaacggagtggcgacggaggtgccaaggggaccgatcgatctgagatcaatgtttgggcaggacgtgatgctggtgcattcaacgggtgctcttcttccagccaacgagtacggcatcctcctccattctctccagatgggcgagagctacttcctggtcagtctcagccctgatcgatcgctagctagctccaactcctctaattcgattctgtcatcacaatgcacgtcactaagctaactagctatataccctgtcaattaattacttacttacagaacaattaattaatcgatctatagtcaattaattaacaaggcgttgcatcatctatgtatatatgacaggtcacgaggtcgtcttgatcgagttgagcgattcgtcgattgattgatcgatggcaacgtacgtattgtgtcagcaagatttaggtaccccttgtccgttggatcagatcgatatgcaagcaacgcatgctttgcaggtgccggccggttaattacgcgatcgatcgagctagcagatgatgaatgctgcacgtacgcatggcaattgtcactgcgacgagcctgcatatatatgaacgatccattgatcgtcattctagcgaccaagcagcacgatagtacaagtatatactatacaatgcaattgcagcgacgaactagttaattataatacagataatgcatgtgtacttctgtggccatacatatatatatagagagagaggggattaattactatattcgtttttcatctagctggtcgatctctgtgtgtacttgtatgtatcccgttctcgatctttatatcagaatattttatatatgtatattttacaattatat
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| CDS seq | atgacaggcaccattttcagttccatccaaaaagtaaagagtgacaagctagaacatcgcttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcccgccgccgccagcgccagctgcaggcgcaggcgcaggcggccgcggccgccgcctcgtcgggatctcctccgactgcttcgtccggtggcctcgcgcctggccacgccggctcgccggcttcgtcgctcgggatgttcgcgcacggcgccgccgggtacagctcctcgtcgtcctcatcgtggccgtcctcgccgccgtcggtggggatgatgatgggggacgtggactacgggggcggcggcgacgacctgttcgccatctcgaggcagatggggtacatggacggcggcggcggctcgtcgtcgtcggcggccgccggtcagcatcagcagcagcagctctactactcgtgtcaacctgcgacgatgacggtgttcatcaacggagtggcgacggaggtgccaaggggaccgatcgatctgagatcaatgtttgggcaggacgtgatgctggtgcattcaacgggtgctcttcttccagccaacgagtacggcatcctcctccattctctccagatgggcgagagctacttcctggtcacgaggtcgtcttga
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| Protein seq | MTGTIFSSIQKVKSDKLEHRFGAVGDANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAPGHAGSPASSLGMFAHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMDGGGGSSSSAAAGQHQQQQLYYSCQPATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGILLHSLQMGESYFLVTRSS |
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| Function | WUSCHEL-related homeobox 11 [UniProtKB/Swiss-Prot:Q0D3I7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0027700 | OsARC_07g0027700.01 | Chr07 | 28731847 | 28734792 | + | NAM | ||
| CDS seq | atgacaggcaccattttcagttccatccaaaaagtaaagagtgacaagctagaacatcgcttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcccgccgccgccagcgccagctgcaggcgcaggcgcaggcggccgcggccgccgcctcgtcgggatctcctccgactgcttcgtccggtggcctcgcgcctggccacgccggctcgccggcttcgtcgctcgggatgttcgcgcacggcgccgccgggtacagctcctcgtcgtcctcatcgtggccgtcctcgccgccgtcggtggggatgatgatgggggacgtggactacgggggcggcggcgacgacctgttcgccatctcgaggcagatggggtacatggacggcggcggcggctcgtcgtcgtcggcggccgccggtcagcatcagcagcagcagctctactactcgtgtcaacctgcgacgatgacggtgttcatcaacggagtggcgacggaggtgccaaggggaccgatcgatctgagatcaatgtttgggcaggacgtgatgctggtgcattcaacgggtgctcttcttccagccaacgagtacggcatcctcctccattctctccagatgggcgagagctacttcctggtcacgaggtcgtcttga
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| Protein seq | MTGTIFSSIQKVKSDKLEHRFGAVGDANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAPGHAGSPASSLGMFAHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMDGGGGSSSSAAAGQHQQQQLYYSCQPATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGILLHSLQMGESYFLVTRSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0684900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48560 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0684900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0028070 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0028120 | RBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027910 | RBH | 0.0 | 1.502930 | 0.254555 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016020 | RBH | 0.0 | 0.030642 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0028010 | RBH | 0.0 | 2.694478 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0472800 | RBH | 0.142162 | 0.4955175 | 1.8502675 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028440 | RBH | 0.000000 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0486700 | RBH | 0.550267 | 1.6508605 | 1.180697 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027730 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0028180 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027900 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0028230 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027790 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027860 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027610 | RBH | 0.0 | 0.0 | 0.0 |
